RNA–Protein interactions for RNA: ENST00000525922.2

PPFIA1-204, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-204ENST00000525922 SHROOM2Q13796 1616 aa13.28□□□□□ -0.28
PPFIA1-204ENST00000525922 CUL7Q14999 1698 aa13.28□□□□□ -0.28
PPFIA1-204ENST00000525922 RUSC2Q8N2Y8 1516 aa13.27□□□□□ -0.29
PPFIA1-204ENST00000525922 KIAA0586Q9BVV6 1533 aa13.27□□□□□ -0.29
PPFIA1-204ENST00000525922 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPFIA1-204ENST00000525922 TTBK1Q5TCY1 1321 aaPredicted RBP13.2□□□□□ -0.3
PPFIA1-204ENST00000525922 RAPGEF2Q9Y4G8 1499 aa13.19□□□□□ -0.3
PPFIA1-204ENST00000525922 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
PPFIA1-204ENST00000525922 PTPRGP23470 1445 aa13.15□□□□□ -0.3
PPFIA1-204ENST00000525922 IQGAP2Q13576 1575 aa13.14□□□□□ -0.31
PPFIA1-204ENST00000525922 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
PPFIA1-204ENST00000525922 FAM69CQ0P6D2 419 aa13.09□□□□□ -0.31
PPFIA1-204ENST00000525922 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.32
PPFIA1-204ENST00000525922 PRXQ9BXM0 1461 aa13.08□□□□□ -0.32
PPFIA1-204ENST00000525922 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
PPFIA1-204ENST00000525922 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
PPFIA1-204ENST00000525922 UGGT2Q9NYU1 1516 aa13.06□□□□□ -0.32
PPFIA1-204ENST00000525922 MAPKBP1O60336 1514 aa13.04□□□□□ -0.32
PPFIA1-204ENST00000525922 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
PPFIA1-204ENST00000525922 UACAQ9BZF9 1416 aa13.04□□□□□ -0.32
PPFIA1-204ENST00000525922 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
PPFIA1-204ENST00000525922 EEA1Q15075 1411 aa13.02□□□□□ -0.33
PPFIA1-204ENST00000525922 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
PPFIA1-204ENST00000525922 ABCC2Q92887 1545 aa13.02□□□□□ -0.33
PPFIA1-204ENST00000525922 KIAA0556O60303 1618 aa13□□□□□ -0.33
PPFIA1-204ENST00000525922 UHRF1BP1LA0JNW5 1464 aa13□□□□□ -0.33
PPFIA1-204ENST00000525922 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
PPFIA1-204ENST00000525922 P3H3Q8IVL6 736 aa12.98□□□□□ -0.33
PPFIA1-204ENST00000525922 ASXL2Q76L83 1435 aa12.97□□□□□ -0.33
PPFIA1-204ENST00000525922 DIP2BQ9P265 1576 aa12.97□□□□□ -0.33
PPFIA1-204ENST00000525922 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
PPFIA1-204ENST00000525922 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.33
PPFIA1-204ENST00000525922 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
PPFIA1-204ENST00000525922 KDM5BQ9UGL1 1544 aa12.94□□□□□ -0.34
PPFIA1-204ENST00000525922 KIF13AQ9H1H9 1805 aa12.94□□□□□ -0.34
PPFIA1-204ENST00000525922 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
PPFIA1-204ENST00000525922 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
PPFIA1-204ENST00000525922 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
PPFIA1-204ENST00000525922 UBTFP17480 764 aaKnown RBP12.88□□□□□ -0.35
PPFIA1-204ENST00000525922 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
PPFIA1-204ENST00000525922 ZCCHC11Q5TAX3 1644 aaKnown RBP12.88□□□□□ -0.35
PPFIA1-204ENST00000525922 EPRSP07814 1512 aaKnown RBP12.88□□□□□ -0.35
PPFIA1-204ENST00000525922 ABCA8O94911 1581 aa12.87□□□□□ -0.35
PPFIA1-204ENST00000525922 GLI2P10070 1586 aa12.86□□□□□ -0.35
PPFIA1-204ENST00000525922 WDR7Q9Y4E6 1490 aa12.86□□□□□ -0.35
PPFIA1-204ENST00000525922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.86□□□□□ -0.35
PPFIA1-204ENST00000525922 HNRNPUL2Q1KMD3 747 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-204ENST00000525922 KIF21BO75037 1637 aa12.84□□□□□ -0.35
PPFIA1-204ENST00000525922 KDM6BO15054 1643 aa12.84□□□□□ -0.35
PPFIA1-204ENST00000525922 SAMD9Q5K651 1589 aa12.83□□□□□ -0.36
PPFIA1-204ENST00000525922 FHOD3Q2V2M9 1422 aa12.83□□□□□ -0.36
PPFIA1-204ENST00000525922 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
PPFIA1-204ENST00000525922 ATP10BO94823 1461 aa12.81□□□□□ -0.36
PPFIA1-204ENST00000525922 TEX14Q8IWB6 1497 aa12.81□□□□□ -0.36
PPFIA1-204ENST00000525922 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
PPFIA1-204ENST00000525922 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
PPFIA1-204ENST00000525922 MAP3K4Q9Y6R4 1608 aa12.77□□□□□ -0.36
PPFIA1-204ENST00000525922 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.37
PPFIA1-204ENST00000525922 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
PPFIA1-204ENST00000525922 NUP153P49790 1475 aaKnown RBP12.75□□□□□ -0.37
PPFIA1-204ENST00000525922 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
PPFIA1-204ENST00000525922 COL17A1Q9UMD9 1497 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-204ENST00000525922 PLEKHD1A6NEE1 506 aa12.74□□□□□ -0.37
PPFIA1-204ENST00000525922 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
PPFIA1-204ENST00000525922 FMN1Q68DA7 1419 aa12.71□□□□□ -0.38
PPFIA1-204ENST00000525922 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
PPFIA1-204ENST00000525922 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
PPFIA1-204ENST00000525922 KDM4FA0A1W2PPD8 638 aa12.68□□□□□ -0.38
PPFIA1-204ENST00000525922 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
PPFIA1-204ENST00000525922 PHLDB1Q86UU1 1377 aa12.66□□□□□ -0.38
PPFIA1-204ENST00000525922 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
PPFIA1-204ENST00000525922 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
PPFIA1-204ENST00000525922 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
PPFIA1-204ENST00000525922 ARAP3Q8WWN8 1544 aa12.62□□□□□ -0.39
PPFIA1-204ENST00000525922 NEO1Q92859 1461 aa12.62□□□□□ -0.39
PPFIA1-204ENST00000525922 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
PPFIA1-204ENST00000525922 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
PPFIA1-204ENST00000525922 CLIP1P30622 1438 aa12.6□□□□□ -0.39
PPFIA1-204ENST00000525922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
PPFIA1-204ENST00000525922 FANCAO15360 1455 aa12.59□□□□□ -0.39
PPFIA1-204ENST00000525922 AKNAQ7Z591 1439 aa12.58□□□□□ -0.4
PPFIA1-204ENST00000525922 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
PPFIA1-204ENST00000525922 DENND4BO75064 1496 aaPredicted RBP12.56□□□□□ -0.4
PPFIA1-204ENST00000525922 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
PPFIA1-204ENST00000525922 PLCH2O75038 1416 aa12.55□□□□□ -0.4
PPFIA1-204ENST00000525922 TROQ12816 1431 aaPredicted RBP12.55□□□□□ -0.4
PPFIA1-204ENST00000525922 EFCAB2Q5VUJ9 269 aa12.55□□□□□ -0.4
PPFIA1-204ENST00000525922 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
PPFIA1-204ENST00000525922 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
PPFIA1-204ENST00000525922 PCF11O94913 1555 aaKnown RBP12.53□□□□□ -0.4
PPFIA1-204ENST00000525922 CFAP74Q9C0B2 1584 aa12.52□□□□□ -0.4
PPFIA1-204ENST00000525922 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.41
PPFIA1-204ENST00000525922 KIF14Q15058 1648 aa12.51□□□□□ -0.41
PPFIA1-204ENST00000525922 FYCO1Q9BQS8 1478 aa12.51□□□□□ -0.41
PPFIA1-204ENST00000525922 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
PPFIA1-204ENST00000525922 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
PPFIA1-204ENST00000525922 CEP162Q5TB80 1403 aa12.48□□□□□ -0.41
PPFIA1-204ENST00000525922 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
PPFIA1-204ENST00000525922 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
PPFIA1-204ENST00000525922 POGZQ7Z3K3 1410 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms