RNA–Protein interactions for RNA: ENST00000525358.1

EDRF1-210, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 3

Gene EDRF1, Length 436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-210ENST00000525358 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
EDRF1-210ENST00000525358 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
EDRF1-210ENST00000525358 EEA1Q15075 1411 aa18.29■□□□□ 0.52
EDRF1-210ENST00000525358 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
EDRF1-210ENST00000525358 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
EDRF1-210ENST00000525358 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
EDRF1-210ENST00000525358 PPP4R3CPQ6ZMV5 832 aa18.25■□□□□ 0.51
EDRF1-210ENST00000525358 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
EDRF1-210ENST00000525358 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
EDRF1-210ENST00000525358 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
EDRF1-210ENST00000525358 PRXQ9BXM0 1461 aa18.2■□□□□ 0.5
EDRF1-210ENST00000525358 KIAA0586Q9BVV6 1533 aa18.2■□□□□ 0.5
EDRF1-210ENST00000525358 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
EDRF1-210ENST00000525358 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
EDRF1-210ENST00000525358 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
EDRF1-210ENST00000525358 CYB5RLQ6IPT4 315 aa18.15■□□□□ 0.5
EDRF1-210ENST00000525358 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
EDRF1-210ENST00000525358 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
EDRF1-210ENST00000525358 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
EDRF1-210ENST00000525358 IQGAP2Q13576 1575 aa18.07■□□□□ 0.48
EDRF1-210ENST00000525358 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
EDRF1-210ENST00000525358 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
EDRF1-210ENST00000525358 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
EDRF1-210ENST00000525358 KIF21BO75037 1637 aa18.01■□□□□ 0.47
EDRF1-210ENST00000525358 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
EDRF1-210ENST00000525358 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
EDRF1-210ENST00000525358 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
EDRF1-210ENST00000525358 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
EDRF1-210ENST00000525358 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
EDRF1-210ENST00000525358 TNIKQ9UKE5 1360 aa17.95■□□□□ 0.46
EDRF1-210ENST00000525358 PTPRGP23470 1445 aa17.95■□□□□ 0.46
EDRF1-210ENST00000525358 DISP1Q96F81 1524 aa17.94■□□□□ 0.46
EDRF1-210ENST00000525358 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
EDRF1-210ENST00000525358 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
EDRF1-210ENST00000525358 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
EDRF1-210ENST00000525358 P3H3Q8IVL6 736 aa17.88■□□□□ 0.45
EDRF1-210ENST00000525358 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
EDRF1-210ENST00000525358 DMRT2Q9Y5R5 561 aa17.84■□□□□ 0.45
EDRF1-210ENST00000525358 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
EDRF1-210ENST00000525358 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
EDRF1-210ENST00000525358 SAMD9Q5K651 1589 aa17.79■□□□□ 0.44
EDRF1-210ENST00000525358 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
EDRF1-210ENST00000525358 UHRF1BP1LA0JNW5 1464 aa17.77■□□□□ 0.44
EDRF1-210ENST00000525358 TRHP20396 242 aaPredicted RBP17.77■□□□□ 0.44
EDRF1-210ENST00000525358 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.43
EDRF1-210ENST00000525358 ADCY10Q96PN6 1610 aa17.76■□□□□ 0.43
EDRF1-210ENST00000525358 FHOD3Q2V2M9 1422 aa17.73■□□□□ 0.43
EDRF1-210ENST00000525358 ABCC2Q92887 1545 aa17.73■□□□□ 0.43
EDRF1-210ENST00000525358 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
EDRF1-210ENST00000525358 PLB1Q6P1J6 1458 aa17.73■□□□□ 0.43
EDRF1-210ENST00000525358 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
EDRF1-210ENST00000525358 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
EDRF1-210ENST00000525358 ABCA8O94911 1581 aa17.69■□□□□ 0.42
EDRF1-210ENST00000525358 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
EDRF1-210ENST00000525358 MAPKBP1O60336 1514 aa17.66■□□□□ 0.42
EDRF1-210ENST00000525358 CLIP1P30622 1438 aa17.65■□□□□ 0.42
EDRF1-210ENST00000525358 FMN1Q68DA7 1419 aa17.64■□□□□ 0.42
EDRF1-210ENST00000525358 KCNA4P22459 653 aa17.64■□□□□ 0.41
EDRF1-210ENST00000525358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
EDRF1-210ENST00000525358 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
EDRF1-210ENST00000525358 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
EDRF1-210ENST00000525358 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
EDRF1-210ENST00000525358 FAM69CQ0P6D2 419 aa17.61■□□□□ 0.41
EDRF1-210ENST00000525358 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
EDRF1-210ENST00000525358 ASXL2Q76L83 1435 aa17.61■□□□□ 0.41
EDRF1-210ENST00000525358 ZCCHC11Q5TAX3 1644 aaKnown RBP17.59■□□□□ 0.41
EDRF1-210ENST00000525358 ATP10BO94823 1461 aa17.59■□□□□ 0.41
EDRF1-210ENST00000525358 ABCC10Q5T3U5 1492 aa17.59■□□□□ 0.41
EDRF1-210ENST00000525358 CEP162Q5TB80 1403 aa17.58■□□□□ 0.41
EDRF1-210ENST00000525358 NUP153P49790 1475 aaKnown RBP17.56■□□□□ 0.4
EDRF1-210ENST00000525358 PLEKHD1A6NEE1 506 aa17.54■□□□□ 0.4
EDRF1-210ENST00000525358 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
EDRF1-210ENST00000525358 WDR7Q9Y4E6 1490 aa17.52■□□□□ 0.4
EDRF1-210ENST00000525358 DIP2BQ9P265 1576 aa17.51■□□□□ 0.39
EDRF1-210ENST00000525358 CASKIN1Q8WXD9 1431 aa17.5■□□□□ 0.39
EDRF1-210ENST00000525358 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
EDRF1-210ENST00000525358 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
EDRF1-210ENST00000525358 HECW1Q76N89 1606 aa17.49■□□□□ 0.39
EDRF1-210ENST00000525358 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
EDRF1-210ENST00000525358 GLI2P10070 1586 aa17.48■□□□□ 0.39
EDRF1-210ENST00000525358 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
EDRF1-210ENST00000525358 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
EDRF1-210ENST00000525358 CDK13Q14004 1512 aaKnown RBP17.44■□□□□ 0.38
EDRF1-210ENST00000525358 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
EDRF1-210ENST00000525358 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
EDRF1-210ENST00000525358 PCF11O94913 1555 aaKnown RBP17.43■□□□□ 0.38
EDRF1-210ENST00000525358 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
EDRF1-210ENST00000525358 CD109Q6YHK3 1445 aa17.39■□□□□ 0.38
EDRF1-210ENST00000525358 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
EDRF1-210ENST00000525358 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
EDRF1-210ENST00000525358 TROQ12816 1431 aaPredicted RBP17.35■□□□□ 0.37
EDRF1-210ENST00000525358 TEX14Q8IWB6 1497 aa17.34■□□□□ 0.37
EDRF1-210ENST00000525358 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
EDRF1-210ENST00000525358 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
EDRF1-210ENST00000525358 MAGI3Q5TCQ9 1506 aa17.33■□□□□ 0.37
EDRF1-210ENST00000525358 TSPOAP1O95153 1857 aa17.33■□□□□ 0.36
EDRF1-210ENST00000525358 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
EDRF1-210ENST00000525358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.3■□□□□ 0.36
EDRF1-210ENST00000525358 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
EDRF1-210ENST00000525358 APLP2Q06481 763 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms