RNA–Protein interactions for RNA: ENST00000524746.5

NFRKB-202, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-202ENST00000524746 EEA1Q15075 1411 aa11.79□□□□□ -0.52
NFRKB-202ENST00000524746 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.53
NFRKB-202ENST00000524746 NESP48681 1621 aa11.76□□□□□ -0.53
NFRKB-202ENST00000524746 KIF27Q86VH2 1401 aa11.76□□□□□ -0.53
NFRKB-202ENST00000524746 NBR1Q14596 966 aa11.75□□□□□ -0.53
NFRKB-202ENST00000524746 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
NFRKB-202ENST00000524746 ESF1Q9H501 851 aaKnown RBP11.74□□□□□ -0.53
NFRKB-202ENST00000524746 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
NFRKB-202ENST00000524746 RBM19Q9Y4C8 960 aaKnown RBP11.71□□□□□ -0.53
NFRKB-202ENST00000524746 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
NFRKB-202ENST00000524746 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.54
NFRKB-202ENST00000524746 CARMIL1Q5VZK9 1371 aa11.7□□□□□ -0.54
NFRKB-202ENST00000524746 PDS5BQ9NTI5 1447 aa11.7□□□□□ -0.54
NFRKB-202ENST00000524746 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
NFRKB-202ENST00000524746 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
NFRKB-202ENST00000524746 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
NFRKB-202ENST00000524746 CHIC2Q9UKJ5 165 aa11.69□□□□□ -0.54
NFRKB-202ENST00000524746 CUX1P39880 1505 aa11.68□□□□□ -0.54
NFRKB-202ENST00000524746 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
NFRKB-202ENST00000524746 CC2D2AQ9P2K1 1620 aa11.66□□□□□ -0.54
NFRKB-202ENST00000524746 AEBP2Q6ZN18 517 aaPredicted RBP11.66□□□□□ -0.54
NFRKB-202ENST00000524746 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
NFRKB-202ENST00000524746 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
NFRKB-202ENST00000524746 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
NFRKB-202ENST00000524746 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
NFRKB-202ENST00000524746 OSCARQ8IYS5 282 aa11.63□□□□□ -0.55
NFRKB-202ENST00000524746 IGF1RP08069 1367 aa11.63□□□□□ -0.55
NFRKB-202ENST00000524746 SIN3AQ96ST3 1273 aa11.62□□□□□ -0.55
NFRKB-202ENST00000524746 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
NFRKB-202ENST00000524746 PEG3Q9GZU2 1588 aa11.62□□□□□ -0.55
NFRKB-202ENST00000524746 CFTRP13569 1480 aa11.62□□□□□ -0.55
NFRKB-202ENST00000524746 FHOD3Q2V2M9 1422 aa11.61□□□□□ -0.55
NFRKB-202ENST00000524746 SENP3-EIF4A1A0A087X0R7 540 aa11.6□□□□□ -0.55
NFRKB-202ENST00000524746 ARAP1Q96P48 1450 aa11.59□□□□□ -0.55
NFRKB-202ENST00000524746 KIF21BO75037 1637 aa11.59□□□□□ -0.55
NFRKB-202ENST00000524746 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
NFRKB-202ENST00000524746 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
NFRKB-202ENST00000524746 TONSLQ96HA7 1378 aa11.58□□□□□ -0.56
NFRKB-202ENST00000524746 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
NFRKB-202ENST00000524746 TOP2BQ02880 1626 aa11.58□□□□□ -0.56
NFRKB-202ENST00000524746 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
NFRKB-202ENST00000524746 EIF5BO60841 1220 aaKnown RBP11.57□□□□□ -0.56
NFRKB-202ENST00000524746 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
NFRKB-202ENST00000524746 HMGXB3Q12766 1538 aa11.54□□□□□ -0.56
NFRKB-202ENST00000524746 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
NFRKB-202ENST00000524746 CCDC136Q96JN2 1154 aa11.53□□□□□ -0.56
NFRKB-202ENST00000524746 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
NFRKB-202ENST00000524746 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
NFRKB-202ENST00000524746 PRXQ9BXM0 1461 aa11.52□□□□□ -0.56
NFRKB-202ENST00000524746 DEKP35659 375 aaKnown RBP11.52□□□□□ -0.57
NFRKB-202ENST00000524746 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
NFRKB-202ENST00000524746 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
NFRKB-202ENST00000524746 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
NFRKB-202ENST00000524746 ARHGAP35Q9NRY4 1499 aa11.5□□□□□ -0.57
NFRKB-202ENST00000524746 AQRO60306 1485 aaKnown RBP eCLIP11.49□□□□□ -0.571e-7■■■■□ 21.6
NFRKB-202ENST00000524746 FOXD1Q16676 465 aa11.47□□□□□ -0.57
NFRKB-202ENST00000524746 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.57
NFRKB-202ENST00000524746 PPP4R2Q9NY27 417 aa11.45□□□□□ -0.58
NFRKB-202ENST00000524746 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
NFRKB-202ENST00000524746 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
NFRKB-202ENST00000524746 PHLDB1Q86UU1 1377 aa11.44□□□□□ -0.58
NFRKB-202ENST00000524746 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
NFRKB-202ENST00000524746 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
NFRKB-202ENST00000524746 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
NFRKB-202ENST00000524746 CCER2I3L3R5 266 aa11.4□□□□□ -0.58
NFRKB-202ENST00000524746 LAS1LQ9Y4W2 734 aaKnown RBP11.4□□□□□ -0.58
NFRKB-202ENST00000524746 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
NFRKB-202ENST00000524746 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
NFRKB-202ENST00000524746 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
NFRKB-202ENST00000524746 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
NFRKB-202ENST00000524746 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
NFRKB-202ENST00000524746 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
NFRKB-202ENST00000524746 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
NFRKB-202ENST00000524746 MLECQ14165 292 aa11.36□□□□□ -0.59
NFRKB-202ENST00000524746 FHAD1B1AJZ9 1412 aa11.36□□□□□ -0.59
NFRKB-202ENST00000524746 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
NFRKB-202ENST00000524746 CHGAP10645 457 aaKnown RBP11.34□□□□□ -0.59
NFRKB-202ENST00000524746 NEFMP07197 916 aa11.33□□□□□ -0.59
NFRKB-202ENST00000524746 ARXQ96QS3 562 aa11.33□□□□□ -0.6
NFRKB-202ENST00000524746 PPP1R15AO75807 674 aaPredicted RBP11.32□□□□□ -0.6
NFRKB-202ENST00000524746 SLC4A1APQ9BWU0 796 aaKnown RBP11.32□□□□□ -0.6
NFRKB-202ENST00000524746 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
NFRKB-202ENST00000524746 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
NFRKB-202ENST00000524746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.31□□□□□ -0.63e-8■■□□□ 13.6
NFRKB-202ENST00000524746 SENP3Q9H4L4 574 aaPredicted RBP11.31□□□□□ -0.6
NFRKB-202ENST00000524746 LRRC9Q6ZRR7 1453 aa11.3□□□□□ -0.6
NFRKB-202ENST00000524746 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
NFRKB-202ENST00000524746 DNMBPQ6XZF7 1577 aa11.29□□□□□ -0.6
NFRKB-202ENST00000524746 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
NFRKB-202ENST00000524746 MSH5O43196 834 aa11.28□□□□□ -0.6
NFRKB-202ENST00000524746 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
NFRKB-202ENST00000524746 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
NFRKB-202ENST00000524746 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
NFRKB-202ENST00000524746 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
NFRKB-202ENST00000524746 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
NFRKB-202ENST00000524746 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
NFRKB-202ENST00000524746 PCF11O94913 1555 aaKnown RBP11.26□□□□□ -0.61
NFRKB-202ENST00000524746 TSPY4P0CV99 314 aa11.25□□□□□ -0.61
NFRKB-202ENST00000524746 TSPY10P0CW01 314 aa11.25□□□□□ -0.61
NFRKB-202ENST00000524746 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms