RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
CHD7-202ENST00000524602 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
CHD7-202ENST00000524602 TIAM1Q13009 1591 aa12.22□□□□□ -0.45
CHD7-202ENST00000524602 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.45
CHD7-202ENST00000524602 ABCA10Q8WWZ4 1543 aa12.21□□□□□ -0.46
CHD7-202ENST00000524602 CARMIL1Q5VZK9 1371 aa12.2□□□□□ -0.46
CHD7-202ENST00000524602 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
CHD7-202ENST00000524602 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
CHD7-202ENST00000524602 CFAP43Q8NDM7 1665 aa12.17□□□□□ -0.46
CHD7-202ENST00000524602 MIER1Q8N108 512 aa12.17□□□□□ -0.46
CHD7-202ENST00000524602 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
CHD7-202ENST00000524602 CUL7Q14999 1698 aa12.14□□□□□ -0.47
CHD7-202ENST00000524602 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
CHD7-202ENST00000524602 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
CHD7-202ENST00000524602 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■■■ 28
CHD7-202ENST00000524602 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
CHD7-202ENST00000524602 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
CHD7-202ENST00000524602 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
CHD7-202ENST00000524602 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
CHD7-202ENST00000524602 TARBP1Q13395 1621 aaKnown RBP12.08□□□□□ -0.48
CHD7-202ENST00000524602 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
CHD7-202ENST00000524602 RAB3GAP2Q9H2M9 1393 aa12.08□□□□□ -0.48
CHD7-202ENST00000524602 SETD5Q9C0A6 1442 aa12.07□□□□□ -0.48
CHD7-202ENST00000524602 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
CHD7-202ENST00000524602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHD7-202ENST00000524602 MAPKBP1O60336 1514 aa12.07□□□□□ -0.48
CHD7-202ENST00000524602 GAPVD1Q14C86 1478 aa12.07□□□□□ -0.48
CHD7-202ENST00000524602 MRC2Q9UBG0 1479 aa12.07□□□□□ -0.48
CHD7-202ENST00000524602 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
CHD7-202ENST00000524602 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
CHD7-202ENST00000524602 FMN1Q68DA7 1419 aa12.02□□□□□ -0.49
CHD7-202ENST00000524602 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
CHD7-202ENST00000524602 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
CHD7-202ENST00000524602 WDR62O43379 1518 aa12□□□□□ -0.49
CHD7-202ENST00000524602 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
CHD7-202ENST00000524602 ITGAEP38570 1179 aa11.99□□□□□ -0.49
CHD7-202ENST00000524602 SAMD9Q5K651 1589 aa11.99□□□□□ -0.49
CHD7-202ENST00000524602 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
CHD7-202ENST00000524602 P3H3Q8IVL6 736 aa11.98□□□□□ -0.49
CHD7-202ENST00000524602 SNAPC4Q5SXM2 1469 aa11.97□□□□□ -0.49
CHD7-202ENST00000524602 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
CHD7-202ENST00000524602 FAM50AQ14320 339 aaKnown RBP11.95□□□□□ -0.5
CHD7-202ENST00000524602 IFT140Q96RY7 1462 aa11.94□□□□□ -0.5
CHD7-202ENST00000524602 ZNF608Q9ULD9 1512 aaPredicted RBP11.94□□□□□ -0.5
CHD7-202ENST00000524602 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
CHD7-202ENST00000524602 ADAMTS12P58397 1594 aa11.94□□□□□ -0.5
CHD7-202ENST00000524602 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
CHD7-202ENST00000524602 SUPT6HQ7KZ85 1726 aaKnown RBP11.91□□□□□ -0.5
CHD7-202ENST00000524602 LRRIQ1Q96JM4 1722 aa11.91□□□□□ -0.5
CHD7-202ENST00000524602 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
CHD7-202ENST00000524602 HFM1A2PYH4 1435 aa11.89□□□□□ -0.51
CHD7-202ENST00000524602 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
CHD7-202ENST00000524602 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
CHD7-202ENST00000524602 ATP1B4Q9UN42 357 aaPredicted RBP11.89□□□□□ -0.51
CHD7-202ENST00000524602 CCDC18Q5T9S5 1454 aa11.88□□□□□ -0.51
CHD7-202ENST00000524602 PTPN23Q9H3S7 1636 aa11.88□□□□□ -0.51
CHD7-202ENST00000524602 MYOM3Q5VTT5 1437 aa11.87□□□□□ -0.51
CHD7-202ENST00000524602 UACAQ9BZF9 1416 aa11.87□□□□□ -0.51
CHD7-202ENST00000524602 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
CHD7-202ENST00000524602 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
CHD7-202ENST00000524602 IQGAP2Q13576 1575 aa11.86□□□□□ -0.51
CHD7-202ENST00000524602 UGGT2Q9NYU1 1516 aa11.85□□□□□ -0.51
CHD7-202ENST00000524602 PPP1R15AO75807 674 aaPredicted RBP11.84□□□□□ -0.51
CHD7-202ENST00000524602 SIN3AQ96ST3 1273 aa11.84□□□□□ -0.51
CHD7-202ENST00000524602 HECW1Q76N89 1606 aa11.84□□□□□ -0.51
CHD7-202ENST00000524602 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
CHD7-202ENST00000524602 NAIPQ13075 1403 aa11.82□□□□□ -0.52
CHD7-202ENST00000524602 GCC2Q8IWJ2 1684 aa11.81□□□□□ -0.52
CHD7-202ENST00000524602 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
CHD7-202ENST00000524602 PTPRKQ15262 1439 aa11.81□□□□□ -0.52
CHD7-202ENST00000524602 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
CHD7-202ENST00000524602 TONSLQ96HA7 1378 aa11.8□□□□□ -0.52
CHD7-202ENST00000524602 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
CHD7-202ENST00000524602 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
CHD7-202ENST00000524602 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
CHD7-202ENST00000524602 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
CHD7-202ENST00000524602 MAGI3Q5TCQ9 1506 aa11.77□□□□□ -0.53
CHD7-202ENST00000524602 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
CHD7-202ENST00000524602 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
CHD7-202ENST00000524602 KIAA0586Q9BVV6 1533 aa11.76□□□□□ -0.53
CHD7-202ENST00000524602 EPRSP07814 1512 aaKnown RBP11.76□□□□□ -0.53
CHD7-202ENST00000524602 SYNJ2O15056 1496 aa11.75□□□□□ -0.53
CHD7-202ENST00000524602 CEP170Q5SW79 1584 aa11.74□□□□□ -0.53
CHD7-202ENST00000524602 KIAA0556O60303 1618 aa11.73□□□□□ -0.53
CHD7-202ENST00000524602 KDM5BQ9UGL1 1544 aa11.73□□□□□ -0.53
CHD7-202ENST00000524602 DISP1Q96F81 1524 aa11.73□□□□□ -0.53
CHD7-202ENST00000524602 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
CHD7-202ENST00000524602 ANP32CO43423 234 aa11.73□□□□□ -0.53
CHD7-202ENST00000524602 FBLN2P98095 1184 aa11.72□□□□□ -0.53
CHD7-202ENST00000524602 KCNH8Q96L42 1107 aa11.71□□□□□ -0.53
CHD7-202ENST00000524602 CDK13Q14004 1512 aaKnown RBP11.69□□□□□ -0.54
CHD7-202ENST00000524602 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
CHD7-202ENST00000524602 NUP160Q12769 1436 aa11.68□□□□□ -0.54
CHD7-202ENST00000524602 DENND4BO75064 1496 aaPredicted RBP11.67□□□□□ -0.54
CHD7-202ENST00000524602 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
CHD7-202ENST00000524602 DNMT1P26358 1616 aaKnown RBP11.66□□□□□ -0.54
CHD7-202ENST00000524602 RAPGEF6Q8TEU7 1601 aa11.65□□□□□ -0.54
CHD7-202ENST00000524602 KDM6BO15054 1643 aa11.65□□□□□ -0.54
CHD7-202ENST00000524602 NUP153P49790 1475 aaKnown RBP11.64□□□□□ -0.55
CHD7-202ENST00000524602 DAPK1P53355 1430 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms