RNA–Protein interactions for RNA: ENST00000524203.1

PCM1-221, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-221ENST00000524203 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
PCM1-221ENST00000524203 ABCA5Q8WWZ7 1642 aa12.21□□□□□ -0.46
PCM1-221ENST00000524203 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
PCM1-221ENST00000524203 LMTK3Q96Q04 1460 aa12.17□□□□□ -0.46
PCM1-221ENST00000524203 ADAMTS12P58397 1594 aa12.17□□□□□ -0.46
PCM1-221ENST00000524203 ADCY10Q96PN6 1610 aa12.16□□□□□ -0.46
PCM1-221ENST00000524203 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.46
PCM1-221ENST00000524203 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
PCM1-221ENST00000524203 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
PCM1-221ENST00000524203 FHAD1B1AJZ9 1412 aa12.09□□□□□ -0.47
PCM1-221ENST00000524203 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.48
PCM1-221ENST00000524203 COL17A1Q9UMD9 1497 aaPredicted RBP12.08□□□□□ -0.48
PCM1-221ENST00000524203 SOCS7O14512 581 aa12.07□□□□□ -0.48
PCM1-221ENST00000524203 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
PCM1-221ENST00000524203 DISP3Q9P2K9 1392 aa11.99□□□□□ -0.49
PCM1-221ENST00000524203 TOP2BQ02880 1626 aa11.98□□□□□ -0.49
PCM1-221ENST00000524203 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
PCM1-221ENST00000524203 ERICH3Q5RHP9 1530 aa11.97□□□□□ -0.49
PCM1-221ENST00000524203 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
PCM1-221ENST00000524203 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
PCM1-221ENST00000524203 GLI2P10070 1586 aa11.96□□□□□ -0.49
PCM1-221ENST00000524203 PLB1Q6P1J6 1458 aa11.93□□□□□ -0.5
PCM1-221ENST00000524203 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
PCM1-221ENST00000524203 MAP3K4Q9Y6R4 1608 aa11.91□□□□□ -0.5
PCM1-221ENST00000524203 PTPRGP23470 1445 aa11.9□□□□□ -0.5
PCM1-221ENST00000524203 CUL7Q14999 1698 aa11.9□□□□□ -0.5
PCM1-221ENST00000524203 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
PCM1-221ENST00000524203 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
PCM1-221ENST00000524203 KIF21BO75037 1637 aa11.88□□□□□ -0.51
PCM1-221ENST00000524203 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
PCM1-221ENST00000524203 PTPRMP28827 1452 aa11.85□□□□□ -0.51
PCM1-221ENST00000524203 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
PCM1-221ENST00000524203 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
PCM1-221ENST00000524203 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
PCM1-221ENST00000524203 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
PCM1-221ENST00000524203 SPATA31D1Q6ZQQ2 1576 aa11.81□□□□□ -0.52
PCM1-221ENST00000524203 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
PCM1-221ENST00000524203 ADAMTSL3P82987 1691 aa11.79□□□□□ -0.52
PCM1-221ENST00000524203 HSPA2P54652 639 aa11.79□□□□□ -0.52
PCM1-221ENST00000524203 UACAQ9BZF9 1416 aa11.78□□□□□ -0.52
PCM1-221ENST00000524203 ZCCHC11Q5TAX3 1644 aaKnown RBP11.77□□□□□ -0.53
PCM1-221ENST00000524203 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
PCM1-221ENST00000524203 CARMIL2Q6F5E8 1435 aa11.76□□□□□ -0.53
PCM1-221ENST00000524203 CD109Q6YHK3 1445 aa11.73□□□□□ -0.53
PCM1-221ENST00000524203 MADDQ8WXG6 1647 aa11.73□□□□□ -0.53
PCM1-221ENST00000524203 MAGI3Q5TCQ9 1506 aa11.72□□□□□ -0.53
PCM1-221ENST00000524203 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
PCM1-221ENST00000524203 PLPPR3Q6T4P5 718 aa11.71□□□□□ -0.53
PCM1-221ENST00000524203 IGF1RP08069 1367 aa11.7□□□□□ -0.54
PCM1-221ENST00000524203 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
PCM1-221ENST00000524203 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
PCM1-221ENST00000524203 CFAP43Q8NDM7 1665 aa11.69□□□□□ -0.54
PCM1-221ENST00000524203 DISP1Q96F81 1524 aa11.69□□□□□ -0.54
PCM1-221ENST00000524203 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
PCM1-221ENST00000524203 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
PCM1-221ENST00000524203 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
PCM1-221ENST00000524203 ARAP3Q8WWN8 1544 aa11.65□□□□□ -0.54
PCM1-221ENST00000524203 RAPGEF3O95398 923 aa11.64□□□□□ -0.55
PCM1-221ENST00000524203 CARMIL1Q5VZK9 1371 aa11.6□□□□□ -0.55
PCM1-221ENST00000524203 KIF27Q86VH2 1401 aa11.59□□□□□ -0.55
PCM1-221ENST00000524203 KIAA0556O60303 1618 aa11.58□□□□□ -0.56
PCM1-221ENST00000524203 FRMPD1Q5SYB0 1578 aa11.57□□□□□ -0.56
PCM1-221ENST00000524203 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
PCM1-221ENST00000524203 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
PCM1-221ENST00000524203 ARID3CA6NKF2 412 aa11.53□□□□□ -0.56
PCM1-221ENST00000524203 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
PCM1-221ENST00000524203 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.57
PCM1-221ENST00000524203 ARHGEF40Q8TER5 1519 aa11.51□□□□□ -0.57
PCM1-221ENST00000524203 ABCA8O94911 1581 aa11.51□□□□□ -0.57
PCM1-221ENST00000524203 MLECQ14165 292 aa11.51□□□□□ -0.57
PCM1-221ENST00000524203 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
PCM1-221ENST00000524203 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
PCM1-221ENST00000524203 DMRT2Q9Y5R5 561 aa11.5□□□□□ -0.57
PCM1-221ENST00000524203 ABCA9Q8IUA7 1624 aa11.49□□□□□ -0.57
PCM1-221ENST00000524203 NEO1Q92859 1461 aa11.48□□□□□ -0.57
PCM1-221ENST00000524203 LTBP4Q8N2S1 1624 aa11.48□□□□□ -0.57
PCM1-221ENST00000524203 PREX1Q8TCU6 1659 aa11.48□□□□□ -0.57
PCM1-221ENST00000524203 FER1L4A9Z1Z3 1794 aa11.47□□□□□ -0.57
PCM1-221ENST00000524203 CEBPAP49715 358 aaPredicted RBP11.47□□□□□ -0.57
PCM1-221ENST00000524203 TTC37Q6PGP7 1564 aa11.46□□□□□ -0.57
PCM1-221ENST00000524203 FANCAO15360 1455 aa11.46□□□□□ -0.57
PCM1-221ENST00000524203 POGZQ7Z3K3 1410 aa11.46□□□□□ -0.57
PCM1-221ENST00000524203 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
PCM1-221ENST00000524203 ATP10BO94823 1461 aa11.43□□□□□ -0.58
PCM1-221ENST00000524203 PTPRTO14522 1441 aa11.43□□□□□ -0.58
PCM1-221ENST00000524203 AKNAQ7Z591 1439 aa11.43□□□□□ -0.58
PCM1-221ENST00000524203 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
PCM1-221ENST00000524203 DENND4BO75064 1496 aaPredicted RBP11.42□□□□□ -0.58
PCM1-221ENST00000524203 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
PCM1-221ENST00000524203 RAPGEF2Q9Y4G8 1499 aa11.41□□□□□ -0.58
PCM1-221ENST00000524203 UBAP1LF5GYI3 381 aa11.41□□□□□ -0.58
PCM1-221ENST00000524203 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.58
PCM1-221ENST00000524203 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.59
PCM1-221ENST00000524203 FHOD3Q2V2M9 1422 aa11.39□□□□□ -0.59
PCM1-221ENST00000524203 ARHGEF12Q9NZN5 1544 aa11.38□□□□□ -0.59
PCM1-221ENST00000524203 GOLGA3Q08378 1498 aa11.38□□□□□ -0.59
PCM1-221ENST00000524203 EFCAB5A4FU69 1503 aa11.36□□□□□ -0.59
PCM1-221ENST00000524203 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
PCM1-221ENST00000524203 HSPA1LP34931 641 aa11.35□□□□□ -0.59
PCM1-221ENST00000524203 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms