RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
TNFRSF10B-208ENST00000523752 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
TNFRSF10B-208ENST00000523752 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
TNFRSF10B-208ENST00000523752 PCF11O94913 1555 aaKnown RBP11.65□□□□□ -0.54
TNFRSF10B-208ENST00000523752 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.55
TNFRSF10B-208ENST00000523752 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
TNFRSF10B-208ENST00000523752 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
TNFRSF10B-208ENST00000523752 CFAP43Q8NDM7 1665 aa11.62□□□□□ -0.55
TNFRSF10B-208ENST00000523752 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
TNFRSF10B-208ENST00000523752 KCNH8Q96L42 1107 aa11.61□□□□□ -0.55
TNFRSF10B-208ENST00000523752 FHOD3Q2V2M9 1422 aa11.6□□□□□ -0.55
TNFRSF10B-208ENST00000523752 FANCD2Q9BXW9 1451 aa11.6□□□□□ -0.55
TNFRSF10B-208ENST00000523752 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
TNFRSF10B-208ENST00000523752 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
TNFRSF10B-208ENST00000523752 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
TNFRSF10B-208ENST00000523752 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
TNFRSF10B-208ENST00000523752 FHAD1B1AJZ9 1412 aa11.57□□□□□ -0.56
TNFRSF10B-208ENST00000523752 NESP48681 1621 aa11.56□□□□□ -0.56
TNFRSF10B-208ENST00000523752 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF10B-208ENST00000523752 SUPT16HQ9Y5B9 1047 aaKnown RBP11.56□□□□□ -0.56
TNFRSF10B-208ENST00000523752 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
TNFRSF10B-208ENST00000523752 TOPBP1Q92547 1522 aa11.54□□□□□ -0.56
TNFRSF10B-208ENST00000523752 ABCA10Q8WWZ4 1543 aa11.54□□□□□ -0.56
TNFRSF10B-208ENST00000523752 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
TNFRSF10B-208ENST00000523752 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.56
TNFRSF10B-208ENST00000523752 HIRIP3Q9BW71 556 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF10B-208ENST00000523752 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
TNFRSF10B-208ENST00000523752 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
TNFRSF10B-208ENST00000523752 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
TNFRSF10B-208ENST00000523752 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
TNFRSF10B-208ENST00000523752 CUL7Q14999 1698 aa11.49□□□□□ -0.57
TNFRSF10B-208ENST00000523752 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
TNFRSF10B-208ENST00000523752 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.574e-7■■■■■ 34.3
TNFRSF10B-208ENST00000523752 PTPRKQ15262 1439 aa11.46□□□□□ -0.57
TNFRSF10B-208ENST00000523752 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.57
TNFRSF10B-208ENST00000523752 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
TNFRSF10B-208ENST00000523752 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF10B-208ENST00000523752 TDRD9Q8NDG6 1382 aaKnown RBP11.44□□□□□ -0.58
TNFRSF10B-208ENST00000523752 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
TNFRSF10B-208ENST00000523752 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
TNFRSF10B-208ENST00000523752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFRSF10B-208ENST00000523752 SAMD9Q5K651 1589 aa11.42□□□□□ -0.58
TNFRSF10B-208ENST00000523752 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
TNFRSF10B-208ENST00000523752 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
TNFRSF10B-208ENST00000523752 PTPN23Q9H3S7 1636 aa11.41□□□□□ -0.58
TNFRSF10B-208ENST00000523752 NCOA2Q15596 1464 aa11.4□□□□□ -0.59
TNFRSF10B-208ENST00000523752 BCANQ96GW7 911 aa11.39□□□□□ -0.59
TNFRSF10B-208ENST00000523752 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
TNFRSF10B-208ENST00000523752 HFM1A2PYH4 1435 aa11.39□□□□□ -0.59
TNFRSF10B-208ENST00000523752 TSHZ2Q9NRE2 1034 aa11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 MAGI3Q5TCQ9 1506 aa11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 NAIPQ13075 1403 aa11.38□□□□□ -0.59
TNFRSF10B-208ENST00000523752 TONSLQ96HA7 1378 aa11.37□□□□□ -0.59
TNFRSF10B-208ENST00000523752 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
TNFRSF10B-208ENST00000523752 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
TNFRSF10B-208ENST00000523752 MYOM3Q5VTT5 1437 aa11.37□□□□□ -0.59
TNFRSF10B-208ENST00000523752 KDM5BQ9UGL1 1544 aa11.36□□□□□ -0.59
TNFRSF10B-208ENST00000523752 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
TNFRSF10B-208ENST00000523752 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
TNFRSF10B-208ENST00000523752 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
TNFRSF10B-208ENST00000523752 FKBP8Q14318 412 aa11.34□□□□□ -0.59
TNFRSF10B-208ENST00000523752 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
TNFRSF10B-208ENST00000523752 UGGT2Q9NYU1 1516 aa11.33□□□□□ -0.6
TNFRSF10B-208ENST00000523752 KDM6BO15054 1643 aa11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 ANP32CO43423 234 aa11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 RRP7BPQ9NSQ0 103 aa11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 CHIC2Q9UKJ5 165 aa11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF10B-208ENST00000523752 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
TNFRSF10B-208ENST00000523752 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
TNFRSF10B-208ENST00000523752 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
TNFRSF10B-208ENST00000523752 CDK13Q14004 1512 aaKnown RBP11.29□□□□□ -0.6
TNFRSF10B-208ENST00000523752 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
TNFRSF10B-208ENST00000523752 GCC2Q8IWJ2 1684 aa11.28□□□□□ -0.6
TNFRSF10B-208ENST00000523752 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
TNFRSF10B-208ENST00000523752 TCOF1Q13428 1488 aaKnown RBP11.26□□□□□ -0.61
TNFRSF10B-208ENST00000523752 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
TNFRSF10B-208ENST00000523752 EPRSP07814 1512 aaKnown RBP11.26□□□□□ -0.61
TNFRSF10B-208ENST00000523752 IQGAP2Q13576 1575 aa11.25□□□□□ -0.61
TNFRSF10B-208ENST00000523752 FOXD1Q16676 465 aa11.25□□□□□ -0.61
TNFRSF10B-208ENST00000523752 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
TNFRSF10B-208ENST00000523752 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
TNFRSF10B-208ENST00000523752 ADAMTS12P58397 1594 aa11.23□□□□□ -0.61
TNFRSF10B-208ENST00000523752 HSPA5P11021 654 aaKnown RBP11.23□□□□□ -0.61
TNFRSF10B-208ENST00000523752 WDR62O43379 1518 aa11.23□□□□□ -0.61
TNFRSF10B-208ENST00000523752 NEFLP07196 543 aa11.2□□□□□ -0.62
TNFRSF10B-208ENST00000523752 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF10B-208ENST00000523752 MPHOSPH9Q99550 1183 aa11.2□□□□□ -0.62
TNFRSF10B-208ENST00000523752 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFRSF10B-208ENST00000523752 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
TNFRSF10B-208ENST00000523752 AKNAQ7Z591 1439 aa11.19□□□□□ -0.62
TNFRSF10B-208ENST00000523752 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF10B-208ENST00000523752 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
TNFRSF10B-208ENST00000523752 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF10B-208ENST00000523752 MRC2Q9UBG0 1479 aa11.18□□□□□ -0.62
TNFRSF10B-208ENST00000523752 ZNF608Q9ULD9 1512 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms