RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 CCNB3Q8WWL7 1395 aa5.66□□□□□ -1.5
HDAC2-215ENST00000523334 FHOD3Q2V2M9 1422 aa5.66□□□□□ -1.5
HDAC2-215ENST00000523334 FMN1Q68DA7 1419 aa5.66□□□□□ -1.5
HDAC2-215ENST00000523334 ARAP1Q96P48 1450 aa5.66□□□□□ -1.5
HDAC2-215ENST00000523334 ARHGAP35Q9NRY4 1499 aa5.66□□□□□ -1.5
HDAC2-215ENST00000523334 URB2Q14146 1524 aaKnown RBP5.65□□□□□ -1.5
HDAC2-215ENST00000523334 MRC2Q9UBG0 1479 aa5.65□□□□□ -1.5
HDAC2-215ENST00000523334 DIEXFQ68CQ4 756 aaKnown RBP5.65□□□□□ -1.51
HDAC2-215ENST00000523334 PRDM2Q13029 1718 aa5.64□□□□□ -1.51
HDAC2-215ENST00000523334 AQRO60306 1485 aaKnown RBP eCLIP5.64□□□□□ -1.511e-7■■□□□ 13.1
HDAC2-215ENST00000523334 ZNF316A6NFI3 1004 aaPredicted RBP5.64□□□□□ -1.51
HDAC2-215ENST00000523334 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
HDAC2-215ENST00000523334 TRIM52Q96A61 297 aa5.63□□□□□ -1.51
HDAC2-215ENST00000523334 NEUROD1Q13562 356 aa5.62□□□□□ -1.51
HDAC2-215ENST00000523334 GRIN2BQ13224 1484 aa5.62□□□□□ -1.51
HDAC2-215ENST00000523334 IFT140Q96RY7 1462 aa5.61□□□□□ -1.51
HDAC2-215ENST00000523334 CLSPNQ9HAW4 1339 aa5.61□□□□□ -1.51
HDAC2-215ENST00000523334 CUL7Q14999 1698 aa5.6□□□□□ -1.51
HDAC2-215ENST00000523334 ZNF777Q9ULD5 760 aaPredicted RBP5.6□□□□□ -1.51
HDAC2-215ENST00000523334 EFCAB5A4FU69 1503 aa5.6□□□□□ -1.51
HDAC2-215ENST00000523334 CHIC2Q9UKJ5 165 aa5.59□□□□□ -1.51
HDAC2-215ENST00000523334 CARMIL2Q6F5E8 1435 aa5.59□□□□□ -1.51
HDAC2-215ENST00000523334 CASKIN1Q8WXD9 1431 aa5.59□□□□□ -1.51
HDAC2-215ENST00000523334 PLEKHD1A6NEE1 506 aa5.59□□□□□ -1.52
HDAC2-215ENST00000523334 JPH4Q96JJ6 628 aa5.58□□□□□ -1.52
HDAC2-215ENST00000523334 LRRC9Q6ZRR7 1453 aa5.58□□□□□ -1.52
HDAC2-215ENST00000523334 FYCO1Q9BQS8 1478 aa5.57□□□□□ -1.52
HDAC2-215ENST00000523334 SETD5Q9C0A6 1442 aa5.57□□□□□ -1.52
HDAC2-215ENST00000523334 RRP7BPQ9NSQ0 103 aa5.57□□□□□ -1.52
HDAC2-215ENST00000523334 YTHDC1Q96MU7 727 aaKnown RBP5.57□□□□□ -1.52
HDAC2-215ENST00000523334 RRBP1Q9P2E9 1410 aaKnown RBP5.57□□□□□ -1.52
HDAC2-215ENST00000523334 CFDP1Q9UEE9 299 aaPredicted RBP5.56□□□□□ -1.52
HDAC2-215ENST00000523334 PHLDB1Q86UU1 1377 aa5.56□□□□□ -1.52
HDAC2-215ENST00000523334 RAB3GAP2Q9H2M9 1393 aa5.56□□□□□ -1.52
HDAC2-215ENST00000523334 KIF21AQ7Z4S6 1674 aa5.56□□□□□ -1.52
HDAC2-215ENST00000523334 TIAM1Q13009 1591 aa5.56□□□□□ -1.52
HDAC2-215ENST00000523334 SNAPC4Q5SXM2 1469 aa5.55□□□□□ -1.52
HDAC2-215ENST00000523334 TONSLQ96HA7 1378 aa5.55□□□□□ -1.52
HDAC2-215ENST00000523334 ZNF608Q9ULD9 1512 aaPredicted RBP5.55□□□□□ -1.52
HDAC2-215ENST00000523334 MYT1LQ9UL68 1186 aa5.55□□□□□ -1.52
HDAC2-215ENST00000523334 MAP3K1Q13233 1512 aa5.55□□□□□ -1.52
HDAC2-215ENST00000523334 DHX57Q6P158 1386 aaKnown RBP5.54□□□□□ -1.52
HDAC2-215ENST00000523334 TSPY4P0CV99 314 aa5.54□□□□□ -1.52
HDAC2-215ENST00000523334 TSPY10P0CW01 314 aa5.54□□□□□ -1.52
HDAC2-215ENST00000523334 KIAA0586Q9BVV6 1533 aa5.54□□□□□ -1.52
HDAC2-215ENST00000523334 CCDC18Q5T9S5 1454 aa5.53□□□□□ -1.52
HDAC2-215ENST00000523334 ACIN1Q9UKV3 1341 aaKnown RBP5.53□□□□□ -1.52
HDAC2-215ENST00000523334 PCF11O94913 1555 aaKnown RBP5.53□□□□□ -1.52
HDAC2-215ENST00000523334 FGD6Q6ZV73 1430 aa5.53□□□□□ -1.52
HDAC2-215ENST00000523334 IQGAP2Q13576 1575 aa5.53□□□□□ -1.52
HDAC2-215ENST00000523334 ABCA5Q8WWZ7 1642 aa5.52□□□□□ -1.53
HDAC2-215ENST00000523334 SIN3AQ96ST3 1273 aa5.52□□□□□ -1.53
HDAC2-215ENST00000523334 MAGI1Q96QZ7 1491 aaPredicted RBP5.52□□□□□ -1.53
HDAC2-215ENST00000523334 MYOM3Q5VTT5 1437 aa5.52□□□□□ -1.53
HDAC2-215ENST00000523334 GRIN2AQ12879 1464 aa5.52□□□□□ -1.53
HDAC2-215ENST00000523334 NCOA2Q15596 1464 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 WDR62O43379 1518 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 KCNH8Q96L42 1107 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 TIMELESSQ9UNS1 1208 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 SYNJ2O15056 1496 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 PTPRGP23470 1445 aa5.51□□□□□ -1.53
HDAC2-215ENST00000523334 NPM1P06748 294 aaKnown RBP eCLIP5.5□□□□□ -1.53
HDAC2-215ENST00000523334 SLC4A1APQ9BWU0 796 aaKnown RBP5.5□□□□□ -1.53
HDAC2-215ENST00000523334 CTTNBP2Q8WZ74 1663 aa5.5□□□□□ -1.53
HDAC2-215ENST00000523334 TARBP1Q13395 1621 aaKnown RBP5.5□□□□□ -1.53
HDAC2-215ENST00000523334 ADAMTS12P58397 1594 aa5.49□□□□□ -1.53
HDAC2-215ENST00000523334 EHBP1L1Q8N3D4 1523 aa5.49□□□□□ -1.53
HDAC2-215ENST00000523334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.49□□□□□ -1.53
HDAC2-215ENST00000523334 HECW1Q76N89 1606 aa5.49□□□□□ -1.53
HDAC2-215ENST00000523334 ZNF326Q5BKZ1 582 aaKnown RBP5.49□□□□□ -1.53
HDAC2-215ENST00000523334 EPRSP07814 1512 aaKnown RBP5.49□□□□□ -1.53
HDAC2-215ENST00000523334 POLR3GLQ9BT43 218 aa5.48□□□□□ -1.53
HDAC2-215ENST00000523334 MIER1Q8N108 512 aa5.48□□□□□ -1.53
HDAC2-215ENST00000523334 PRG4Q92954 1404 aaPredicted RBP5.47□□□□□ -1.53
HDAC2-215ENST00000523334 DDX10Q13206 875 aaKnown RBP5.47□□□□□ -1.53
HDAC2-215ENST00000523334 CDK13Q14004 1512 aaKnown RBP5.47□□□□□ -1.53
HDAC2-215ENST00000523334 EIF4G3O43432 1585 aaKnown RBP5.47□□□□□ -1.53
HDAC2-215ENST00000523334 WDR97A6NE52 1622 aa5.47□□□□□ -1.53
HDAC2-215ENST00000523334 PBRM1Q86U86 1689 aa5.47□□□□□ -1.53
HDAC2-215ENST00000523334 ANP32CO43423 234 aa5.46□□□□□ -1.53
HDAC2-215ENST00000523334 MIA2Q96PC5 1412 aa5.46□□□□□ -1.53
HDAC2-215ENST00000523334 SUPT6HQ7KZ85 1726 aaKnown RBP5.46□□□□□ -1.53
HDAC2-215ENST00000523334 UGGT2Q9NYU1 1516 aa5.46□□□□□ -1.54
HDAC2-215ENST00000523334 THOC2Q8NI27 1593 aaKnown RBP5.46□□□□□ -1.54
HDAC2-215ENST00000523334 TROQ12816 1431 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-215ENST00000523334 ANKRD30AQ9BXX3 1397 aa5.46□□□□□ -1.54
HDAC2-215ENST00000523334 ZNF644Q9H582 1327 aaPredicted RBP5.46□□□□□ -1.54
HDAC2-215ENST00000523334 MPHOSPH9Q99550 1183 aa5.46□□□□□ -1.54
HDAC2-215ENST00000523334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.46□□□□□ -1.543e-7■■■□□ 17.7
HDAC2-215ENST00000523334 PPP1R15AO75807 674 aaPredicted RBP5.45□□□□□ -1.54
HDAC2-215ENST00000523334 HIRIP3Q9BW71 556 aaPredicted RBP5.45□□□□□ -1.54
HDAC2-215ENST00000523334 SAMD9Q5K651 1589 aa5.45□□□□□ -1.54
HDAC2-215ENST00000523334 PELP1Q8IZL8 1130 aaKnown RBP5.45□□□□□ -1.54
HDAC2-215ENST00000523334 CFAP43Q8NDM7 1665 aa5.45□□□□□ -1.54
HDAC2-215ENST00000523334 HFM1A2PYH4 1435 aa5.45□□□□□ -1.54
HDAC2-215ENST00000523334 UACAQ9BZF9 1416 aa5.45□□□□□ -1.54
HDAC2-215ENST00000523334 RSPH4AQ5TD94 716 aa5.44□□□□□ -1.54
HDAC2-215ENST00000523334 PLB1Q6P1J6 1458 aa5.44□□□□□ -1.54
HDAC2-215ENST00000523334 EIF4G2P78344 907 aaKnown RBP eCLIP5.44□□□□□ -1.54
HDAC2-215ENST00000523334 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms