RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 NISCHQ9Y2I1 1504 aa8.01□□□□□ -1.13
HDAC2-215ENST00000523334 DCAF8L2P0C7V8 631 aa7.04□□□□□ -1.28
HDAC2-215ENST00000523334 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.31
HDAC2-215ENST00000523334 CCDC180Q9P1Z9 1646 aa6.81□□□□□ -1.32
HDAC2-215ENST00000523334 SUPT5HO00267 1087 aaKnown RBP6.78□□□□□ -1.32
HDAC2-215ENST00000523334 ZCCHC6Q5VYS8 1495 aaKnown RBP6.71□□□□□ -1.34
HDAC2-215ENST00000523334 ABCC9O60706 1549 aa6.61□□□□□ -1.35
HDAC2-215ENST00000523334 DCAF1Q9Y4B6 1507 aa6.54□□□□□ -1.36
HDAC2-215ENST00000523334 SCRIBQ14160 1630 aa6.44□□□□□ -1.38
HDAC2-215ENST00000523334 NACADO15069 1562 aa6.43□□□□□ -1.38
HDAC2-215ENST00000523334 MYO15BQ96JP2 1530 aa6.4□□□□□ -1.38
HDAC2-215ENST00000523334 CHIC1Q5VXU3 224 aa6.39□□□□□ -1.39
HDAC2-215ENST00000523334 RB1CC1Q8TDY2 1594 aa6.38□□□□□ -1.39
HDAC2-215ENST00000523334 PABPN1Q86U42 306 aaKnown RBP eCLIP6.35□□□□□ -1.39
HDAC2-215ENST00000523334 TRIM41Q8WV44 630 aa6.34□□□□□ -1.39
HDAC2-215ENST00000523334 RSF1Q96T23 1441 aaPredicted RBP6.31□□□□□ -1.4
HDAC2-215ENST00000523334 FAM9AQ8IZU1 332 aaPredicted RBP6.3□□□□□ -1.4
HDAC2-215ENST00000523334 EHMT2Q96KQ7 1210 aa6.27□□□□□ -1.41
HDAC2-215ENST00000523334 CECR2Q9BXF3 1484 aa6.25□□□□□ -1.41
HDAC2-215ENST00000523334 LOC105371045A0A1W2PR82 267 aa6.21□□□□□ -1.41
HDAC2-215ENST00000523334 BAZ1AQ9NRL2 1556 aaPredicted RBP6.21□□□□□ -1.41
HDAC2-215ENST00000523334 MROH2BQ7Z745 1585 aa6.2□□□□□ -1.42
HDAC2-215ENST00000523334 PCGF6Q9BYE7 350 aa6.15□□□□□ -1.42
HDAC2-215ENST00000523334 WIZO95785 1651 aa6.12□□□□□ -1.43
HDAC2-215ENST00000523334 UBTFP17480 764 aaKnown RBP6.12□□□□□ -1.43
HDAC2-215ENST00000523334 SMARCA4P51532 1647 aa6.1□□□□□ -1.43
HDAC2-215ENST00000523334 BAZ1BQ9UIG0 1483 aaKnown RBP6.09□□□□□ -1.43
HDAC2-215ENST00000523334 TOP2AP11388 1531 aaKnown RBP6.08□□□□□ -1.44
HDAC2-215ENST00000523334 CCDC88BA6NC98 1476 aa6.07□□□□□ -1.44
HDAC2-215ENST00000523334 APLP2Q06481 763 aa6.06□□□□□ -1.44
HDAC2-215ENST00000523334 TRIM26Q12899 539 aaPredicted RBP6.06□□□□□ -1.44
HDAC2-215ENST00000523334 SMARCA2P51531 1590 aa6.05□□□□□ -1.44
HDAC2-215ENST00000523334 CSRNP3Q8WYN3 585 aa6.05□□□□□ -1.44
HDAC2-215ENST00000523334 BICRAQ9NZM4 1560 aa6.04□□□□□ -1.44
HDAC2-215ENST00000523334 RANGAP1P46060 587 aaPredicted RBP6.04□□□□□ -1.44
HDAC2-215ENST00000523334 ATAD2BQ9ULI0 1458 aa6.04□□□□□ -1.44
HDAC2-215ENST00000523334 TTBK1Q5TCY1 1321 aaPredicted RBP6.03□□□□□ -1.44
HDAC2-215ENST00000523334 UNC13AQ9UPW8 1703 aa6.02□□□□□ -1.45
HDAC2-215ENST00000523334 WRNQ14191 1432 aaPredicted RBP eCLIP6.01□□□□□ -1.45
HDAC2-215ENST00000523334 PPARGC1BQ86YN6 1023 aaKnown RBP6.01□□□□□ -1.45
HDAC2-215ENST00000523334 EEA1Q15075 1411 aa5.99□□□□□ -1.45
HDAC2-215ENST00000523334 ABCC8Q09428 1581 aa5.98□□□□□ -1.45
HDAC2-215ENST00000523334 HRCP23327 699 aa5.97□□□□□ -1.45
HDAC2-215ENST00000523334 EIF4G1Q04637 1599 aaKnown RBP5.96□□□□□ -1.46
HDAC2-215ENST00000523334 ZEB1P37275 1124 aaPredicted RBP5.95□□□□□ -1.46
HDAC2-215ENST00000523334 NCAPD3P42695 1498 aa5.95□□□□□ -1.46
HDAC2-215ENST00000523334 SOGA1O94964 1423 aa5.94□□□□□ -1.46
HDAC2-215ENST00000523334 AEBP2Q6ZN18 517 aaPredicted RBP5.93□□□□□ -1.46
HDAC2-215ENST00000523334 PEG3Q9GZU2 1588 aa5.93□□□□□ -1.46
HDAC2-215ENST00000523334 CCER1Q8TC90 406 aaPredicted RBP5.92□□□□□ -1.46
HDAC2-215ENST00000523334 GOLGA3Q08378 1498 aa5.92□□□□□ -1.46
HDAC2-215ENST00000523334 TNIKQ9UKE5 1360 aa5.91□□□□□ -1.46
HDAC2-215ENST00000523334 ATP1B4Q9UN42 357 aaPredicted RBP5.91□□□□□ -1.46
HDAC2-215ENST00000523334 CEP162Q5TB80 1403 aa5.9□□□□□ -1.46
HDAC2-215ENST00000523334 CEP164Q9UPV0 1460 aa5.9□□□□□ -1.46
HDAC2-215ENST00000523334 HMGXB3Q12766 1538 aa5.9□□□□□ -1.47
HDAC2-215ENST00000523334 CADPSQ9ULU8 1353 aa5.9□□□□□ -1.47
HDAC2-215ENST00000523334 KIF27Q86VH2 1401 aa5.89□□□□□ -1.47
HDAC2-215ENST00000523334 CLIP1P30622 1438 aa5.88□□□□□ -1.47
HDAC2-215ENST00000523334 RUSC2Q8N2Y8 1516 aa5.87□□□□□ -1.47
HDAC2-215ENST00000523334 HNRNPUL2Q1KMD3 747 aaKnown RBP5.85□□□□□ -1.47
HDAC2-215ENST00000523334 CFTRP13569 1480 aa5.85□□□□□ -1.47
HDAC2-215ENST00000523334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.84□□□□□ -1.47
HDAC2-215ENST00000523334 CC2D2AQ9P2K1 1620 aa5.84□□□□□ -1.48
HDAC2-215ENST00000523334 CUX2O14529 1486 aa5.84□□□□□ -1.48
HDAC2-215ENST00000523334 SYNJ1O43426 1573 aa5.84□□□□□ -1.48
HDAC2-215ENST00000523334 PDS5BQ9NTI5 1447 aa5.82□□□□□ -1.48
HDAC2-215ENST00000523334 P3H3Q8IVL6 736 aa5.81□□□□□ -1.48
HDAC2-215ENST00000523334 FANCD2Q9BXW9 1451 aa5.81□□□□□ -1.48
HDAC2-215ENST00000523334 CARMIL1Q5VZK9 1371 aa5.8□□□□□ -1.48
HDAC2-215ENST00000523334 RAPGEF2Q9Y4G8 1499 aa5.8□□□□□ -1.48
HDAC2-215ENST00000523334 ITGAEP38570 1179 aa5.8□□□□□ -1.48
HDAC2-215ENST00000523334 TOP2BQ02880 1626 aa5.8□□□□□ -1.48
HDAC2-215ENST00000523334 VPS8Q8N3P4 1428 aa5.78□□□□□ -1.48
HDAC2-215ENST00000523334 CUX1P39880 1505 aa5.78□□□□□ -1.48
HDAC2-215ENST00000523334 FGD5Q6ZNL6 1462 aa5.77□□□□□ -1.49
HDAC2-215ENST00000523334 KIF21BO75037 1637 aa5.76□□□□□ -1.49
HDAC2-215ENST00000523334 FBLN2P98095 1184 aa5.76□□□□□ -1.49
HDAC2-215ENST00000523334 NESP48681 1621 aa5.76□□□□□ -1.49
HDAC2-215ENST00000523334 IGF1RP08069 1367 aa5.75□□□□□ -1.49
HDAC2-215ENST00000523334 TDRD9Q8NDG6 1382 aaKnown RBP5.75□□□□□ -1.49
HDAC2-215ENST00000523334 FAM50AQ14320 339 aaKnown RBP5.75□□□□□ -1.49
HDAC2-215ENST00000523334 PRXQ9BXM0 1461 aa5.74□□□□□ -1.49
HDAC2-215ENST00000523334 ERCC6Q03468 1493 aa5.74□□□□□ -1.49
HDAC2-215ENST00000523334 ERICH3Q5RHP9 1530 aa5.73□□□□□ -1.49
HDAC2-215ENST00000523334 DNAJC5BQ9UF47 199 aa5.73□□□□□ -1.49
HDAC2-215ENST00000523334 RAD54L2Q9Y4B4 1467 aa5.73□□□□□ -1.49
HDAC2-215ENST00000523334 BIVM-ERCC5R4GMW8 1640 aa5.73□□□□□ -1.49
HDAC2-215ENST00000523334 TOPBP1Q92547 1522 aa5.72□□□□□ -1.49
HDAC2-215ENST00000523334 FHAD1B1AJZ9 1412 aa5.72□□□□□ -1.49
HDAC2-215ENST00000523334 LAMC3Q9Y6N6 1575 aa5.71□□□□□ -1.5
HDAC2-215ENST00000523334 CHMP7Q8WUX9 453 aaPredicted RBP5.71□□□□□ -1.5
HDAC2-215ENST00000523334 POLA1P09884 1462 aaPredicted RBP5.71□□□□□ -1.5
HDAC2-215ENST00000523334 DNMBPQ6XZF7 1577 aa5.71□□□□□ -1.5
HDAC2-215ENST00000523334 MTUS2Q5JR59 1369 aa5.69□□□□□ -1.5
HDAC2-215ENST00000523334 KANK4Q5T7N3 995 aaPredicted RBP5.69□□□□□ -1.5
HDAC2-215ENST00000523334 ARID3CA6NKF2 412 aa5.69□□□□□ -1.5
HDAC2-215ENST00000523334 GAPVD1Q14C86 1478 aa5.69□□□□□ -1.5
HDAC2-215ENST00000523334 CDK11AQ9UQ88 783 aaPredicted RBP5.68□□□□□ -1.5
HDAC2-215ENST00000523334 ABCA10Q8WWZ4 1543 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms