RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.96■□□□□ 0.47
DENND3-221ENST00000523308 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
DENND3-221ENST00000523308 DHX37Q8IY37 1157 aaKnown RBP17.94■□□□□ 0.46
DENND3-221ENST00000523308 AAMPQ13685 434 aa17.92■□□□□ 0.46
DENND3-221ENST00000523308 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
DENND3-221ENST00000523308 TSHZ2Q9NRE2 1034 aa17.89■□□□□ 0.45
DENND3-221ENST00000523308 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
DENND3-221ENST00000523308 KIF21BO75037 1637 aa17.86■□□□□ 0.45
DENND3-221ENST00000523308 TAOK2Q9UL54 1235 aa17.86■□□□□ 0.45
DENND3-221ENST00000523308 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
DENND3-221ENST00000523308 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
DENND3-221ENST00000523308 DEKP35659 375 aaKnown RBP17.81■□□□□ 0.44
DENND3-221ENST00000523308 KANK4Q5T7N3 995 aaPredicted RBP17.8■□□□□ 0.44
DENND3-221ENST00000523308 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
DENND3-221ENST00000523308 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
DENND3-221ENST00000523308 MIER1Q8N108 512 aa17.79■□□□□ 0.44
DENND3-221ENST00000523308 ITGAEP38570 1179 aa17.78■□□□□ 0.44
DENND3-221ENST00000523308 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
DENND3-221ENST00000523308 ZMYND15Q9H091 742 aa17.78■□□□□ 0.44
DENND3-221ENST00000523308 BRD2P25440 801 aaKnown RBP17.78■□□□□ 0.44
DENND3-221ENST00000523308 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
DENND3-221ENST00000523308 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
DENND3-221ENST00000523308 RSPH6AQ9H0K4 717 aa17.7■□□□□ 0.42
DENND3-221ENST00000523308 PAXIP1Q6ZW49 1069 aaPredicted RBP17.69■□□□□ 0.42
DENND3-221ENST00000523308 CUX1P39880 1505 aa17.68■□□□□ 0.42
DENND3-221ENST00000523308 GLIPR1L2Q4G1C9 344 aa17.66■□□□□ 0.42
DENND3-221ENST00000523308 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
DENND3-221ENST00000523308 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
DENND3-221ENST00000523308 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
DENND3-221ENST00000523308 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
DENND3-221ENST00000523308 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
DENND3-221ENST00000523308 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
DENND3-221ENST00000523308 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
DENND3-221ENST00000523308 KCNA4P22459 653 aa17.59■□□□□ 0.41
DENND3-221ENST00000523308 RSPH4AQ5TD94 716 aa17.59■□□□□ 0.41
DENND3-221ENST00000523308 NCAPD3P42695 1498 aa17.59■□□□□ 0.41
DENND3-221ENST00000523308 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
DENND3-221ENST00000523308 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
DENND3-221ENST00000523308 ERICH3Q5RHP9 1530 aa17.54■□□□□ 0.4
DENND3-221ENST00000523308 CUX2O14529 1486 aa17.53■□□□□ 0.4
DENND3-221ENST00000523308 CFTRP13569 1480 aa17.52■□□□□ 0.4
DENND3-221ENST00000523308 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
DENND3-221ENST00000523308 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
DENND3-221ENST00000523308 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
DENND3-221ENST00000523308 NAP1L5Q96NT1 182 aaPredicted RBP17.46■□□□□ 0.39
DENND3-221ENST00000523308 IGF1RP08069 1367 aa17.46■□□□□ 0.39
DENND3-221ENST00000523308 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
DENND3-221ENST00000523308 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
DENND3-221ENST00000523308 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
DENND3-221ENST00000523308 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
DENND3-221ENST00000523308 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
DENND3-221ENST00000523308 IL27Q8NEV9 243 aa17.41■□□□□ 0.38
DENND3-221ENST00000523308 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.38
DENND3-221ENST00000523308 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
DENND3-221ENST00000523308 CADPSQ9ULU8 1353 aa17.38■□□□□ 0.37
DENND3-221ENST00000523308 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
DENND3-221ENST00000523308 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
DENND3-221ENST00000523308 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
DENND3-221ENST00000523308 KCNH8Q96L42 1107 aa17.34■□□□□ 0.37
DENND3-221ENST00000523308 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
DENND3-221ENST00000523308 SUPT16HQ9Y5B9 1047 aaKnown RBP17.34■□□□□ 0.37
DENND3-221ENST00000523308 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
DENND3-221ENST00000523308 CDK11AQ9UQ88 783 aaPredicted RBP17.33■□□□□ 0.36
DENND3-221ENST00000523308 RAD54L2Q9Y4B4 1467 aa17.33■□□□□ 0.36
DENND3-221ENST00000523308 MSH5O43196 834 aa17.32■□□□□ 0.36
DENND3-221ENST00000523308 PHLDB1Q86UU1 1377 aa17.32■□□□□ 0.36
DENND3-221ENST00000523308 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
DENND3-221ENST00000523308 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
DENND3-221ENST00000523308 NESP48681 1621 aa17.28■□□□□ 0.36
DENND3-221ENST00000523308 BCANQ96GW7 911 aa17.28■□□□□ 0.36
DENND3-221ENST00000523308 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.27■□□□□ 0.35
DENND3-221ENST00000523308 TIAM1Q13009 1591 aa17.26■□□□□ 0.35
DENND3-221ENST00000523308 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
DENND3-221ENST00000523308 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
DENND3-221ENST00000523308 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
DENND3-221ENST00000523308 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
DENND3-221ENST00000523308 DDX10Q13206 875 aaKnown RBP17.23■□□□□ 0.35
DENND3-221ENST00000523308 HSP90B1P14625 803 aaKnown RBP17.22■□□□□ 0.35
DENND3-221ENST00000523308 BCCIPQ9P287 314 aaKnown RBP eCLIP17.21■□□□□ 0.35
DENND3-221ENST00000523308 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
DENND3-221ENST00000523308 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
DENND3-221ENST00000523308 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
DENND3-221ENST00000523308 SETD5Q9C0A6 1442 aa17.21■□□□□ 0.34
DENND3-221ENST00000523308 PCF11O94913 1555 aaKnown RBP17.19■□□□□ 0.34
DENND3-221ENST00000523308 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
DENND3-221ENST00000523308 ARID3CA6NKF2 412 aa17.16■□□□□ 0.34
DENND3-221ENST00000523308 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
DENND3-221ENST00000523308 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
DENND3-221ENST00000523308 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
DENND3-221ENST00000523308 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
DENND3-221ENST00000523308 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
DENND3-221ENST00000523308 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
DENND3-221ENST00000523308 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
DENND3-221ENST00000523308 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
DENND3-221ENST00000523308 BBXQ8WY36 941 aaPredicted RBP17.06■□□□□ 0.32
DENND3-221ENST00000523308 MTUS2Q5JR59 1369 aa17.06■□□□□ 0.32
DENND3-221ENST00000523308 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
DENND3-221ENST00000523308 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
DENND3-221ENST00000523308 MAP3K1Q13233 1512 aa17.05■□□□□ 0.32
DENND3-221ENST00000523308 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms