RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 AEBP2Q6ZN18 517 aaPredicted RBP30.85■■■□□ 2.53
VEGFA-222ENST00000520948 CUL7Q14999 1698 aa30.82■■■□□ 2.52
VEGFA-222ENST00000520948 KIF27Q86VH2 1401 aa30.81■■■□□ 2.52
VEGFA-222ENST00000520948 IGF1RP08069 1367 aa30.8■■■□□ 2.52
VEGFA-222ENST00000520948 KIAA0586Q9BVV6 1533 aa30.76■■■□□ 2.51
VEGFA-222ENST00000520948 ADCY10Q96PN6 1610 aa30.76■■■□□ 2.51
VEGFA-222ENST00000520948 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
VEGFA-222ENST00000520948 NPM1P06748 294 aaKnown RBP eCLIP30.69■■■□□ 2.5
VEGFA-222ENST00000520948 MAPKBP1O60336 1514 aa30.68■■■□□ 2.5
VEGFA-222ENST00000520948 ABCC10Q5T3U5 1492 aa30.67■■■□□ 2.5
VEGFA-222ENST00000520948 FAM69CQ0P6D2 419 aa30.66■■■□□ 2.5
VEGFA-222ENST00000520948 DIP2BQ9P265 1576 aa30.65■■■□□ 2.5
VEGFA-222ENST00000520948 CARMIL1Q5VZK9 1371 aa30.61■■■□□ 2.49
VEGFA-222ENST00000520948 TTBK1Q5TCY1 1321 aaPredicted RBP30.55■■■□□ 2.48
VEGFA-222ENST00000520948 TSPOAP1O95153 1857 aa30.51■■■□□ 2.47
VEGFA-222ENST00000520948 PTPRGP23470 1445 aa30.51■■■□□ 2.47
VEGFA-222ENST00000520948 IQGAP2Q13576 1575 aa30.5■■■□□ 2.47
VEGFA-222ENST00000520948 CARMIL2Q6F5E8 1435 aa30.46■■■□□ 2.47
VEGFA-222ENST00000520948 TNIKQ9UKE5 1360 aa30.44■■■□□ 2.46
VEGFA-222ENST00000520948 KDM6BO15054 1643 aa30.43■■■□□ 2.46
VEGFA-222ENST00000520948 ABCC2Q92887 1545 aa30.38■■■□□ 2.45
VEGFA-222ENST00000520948 DISP1Q96F81 1524 aa30.35■■■□□ 2.45
VEGFA-222ENST00000520948 RAPGEF2Q9Y4G8 1499 aa30.33■■■□□ 2.45
VEGFA-222ENST00000520948 ASXL2Q76L83 1435 aa30.3■■■□□ 2.44
VEGFA-222ENST00000520948 EEA1Q15075 1411 aa30.29■■■□□ 2.44
VEGFA-222ENST00000520948 UHRF1BP1LA0JNW5 1464 aa30.28■■■□□ 2.44
VEGFA-222ENST00000520948 UACAQ9BZF9 1416 aa30.28■■■□□ 2.44
VEGFA-222ENST00000520948 UGGT2Q9NYU1 1516 aa30.27■■■□□ 2.44
VEGFA-222ENST00000520948 PLB1Q6P1J6 1458 aa30.25■■■□□ 2.43
VEGFA-222ENST00000520948 PPRC1Q5VV67 1664 aaKnown RBP30.24■■■□□ 2.43
VEGFA-222ENST00000520948 CSRNP3Q8WYN3 585 aa30.24■■■□□ 2.43
VEGFA-222ENST00000520948 KIAA0556O60303 1618 aa30.24■■■□□ 2.43
VEGFA-222ENST00000520948 GLI2P10070 1586 aa30.22■■■□□ 2.43
VEGFA-222ENST00000520948 PRXQ9BXM0 1461 aa30.19■■■□□ 2.42
VEGFA-222ENST00000520948 ZCCHC11Q5TAX3 1644 aaKnown RBP30.18■■■□□ 2.42
VEGFA-222ENST00000520948 CTTNBP2Q8WZ74 1663 aa30.18■■■□□ 2.42
VEGFA-222ENST00000520948 KDM5BQ9UGL1 1544 aa30.17■■■□□ 2.42
VEGFA-222ENST00000520948 KDM4FA0A1W2PPD8 638 aa30.13■■■□□ 2.41
VEGFA-222ENST00000520948 FAM9AQ8IZU1 332 aaPredicted RBP30.13■■■□□ 2.41
VEGFA-222ENST00000520948 EPRSP07814 1512 aaKnown RBP30.12■■■□□ 2.41
VEGFA-222ENST00000520948 MAP3K4Q9Y6R4 1608 aa30.11■■■□□ 2.41
VEGFA-222ENST00000520948 COL17A1Q9UMD9 1497 aaPredicted RBP30■■■□□ 2.39
VEGFA-222ENST00000520948 GOLGA3Q08378 1498 aa29.99■■■□□ 2.39
VEGFA-222ENST00000520948 WDR7Q9Y4E6 1490 aa29.99■■■□□ 2.39
VEGFA-222ENST00000520948 TEX14Q8IWB6 1497 aa29.98■■■□□ 2.39
VEGFA-222ENST00000520948 KIF21BO75037 1637 aa29.96■■■□□ 2.39
VEGFA-222ENST00000520948 ABCA8O94911 1581 aa29.95■■■□□ 2.39
VEGFA-222ENST00000520948 ADGRL1O94910 1474 aa29.91■■■□□ 2.38
VEGFA-222ENST00000520948 CFAP43Q8NDM7 1665 aa29.85■■■□□ 2.37
VEGFA-222ENST00000520948 KCNH8Q96L42 1107 aa29.84■■■□□ 2.37
VEGFA-222ENST00000520948 CD109Q6YHK3 1445 aa29.8■■■□□ 2.36
VEGFA-222ENST00000520948 P3H3Q8IVL6 736 aa29.79■■■□□ 2.36
VEGFA-222ENST00000520948 ARID3CA6NKF2 412 aa29.78■■■□□ 2.36
VEGFA-222ENST00000520948 MAGI3Q5TCQ9 1506 aa29.77■■■□□ 2.36
VEGFA-222ENST00000520948 SAMD9Q5K651 1589 aa29.69■■■□□ 2.34
VEGFA-222ENST00000520948 ATP10BO94823 1461 aa29.68■■■□□ 2.34
VEGFA-222ENST00000520948 EHMT2Q96KQ7 1210 aa29.66■■■□□ 2.34
VEGFA-222ENST00000520948 UBTFP17480 764 aaKnown RBP29.65■■■□□ 2.34
VEGFA-222ENST00000520948 RAPGEF6Q8TEU7 1601 aa29.63■■■□□ 2.33
VEGFA-222ENST00000520948 ABCA9Q8IUA7 1624 aa29.59■■■□□ 2.33
VEGFA-222ENST00000520948 RANGAP1P46060 587 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-222ENST00000520948 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
VEGFA-222ENST00000520948 ARAP3Q8WWN8 1544 aa29.55■■■□□ 2.32
VEGFA-222ENST00000520948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.51■■■□□ 2.31
VEGFA-222ENST00000520948 HNRNPUL2Q1KMD3 747 aaKnown RBP29.51■■■□□ 2.31
VEGFA-222ENST00000520948 FHOD3Q2V2M9 1422 aa29.5■■■□□ 2.31
VEGFA-222ENST00000520948 NUP153P49790 1475 aaKnown RBP29.49■■■□□ 2.31
VEGFA-222ENST00000520948 LOC105371045A0A1W2PR82 267 aa29.45■■■□□ 2.31
VEGFA-222ENST00000520948 EFCAB5A4FU69 1503 aa29.41■■■□□ 2.3
VEGFA-222ENST00000520948 PHLDB1Q86UU1 1377 aa29.4■■■□□ 2.3
VEGFA-222ENST00000520948 RAPGEF3O95398 923 aa29.4■■■□□ 2.3
VEGFA-222ENST00000520948 NEO1Q92859 1461 aa29.4■■■□□ 2.3
VEGFA-222ENST00000520948 ILDR1Q86SU0 546 aaPredicted RBP29.38■■■□□ 2.29
VEGFA-222ENST00000520948 FRMPD1Q5SYB0 1578 aa29.38■■■□□ 2.29
VEGFA-222ENST00000520948 ARHGAP35Q9NRY4 1499 aa29.36■■■□□ 2.29
VEGFA-222ENST00000520948 ADAMTSL3P82987 1691 aa29.31■■■□□ 2.28
VEGFA-222ENST00000520948 PLEKHD1A6NEE1 506 aa29.29■■■□□ 2.28
VEGFA-222ENST00000520948 TTC37Q6PGP7 1564 aa29.26■■■□□ 2.28
VEGFA-222ENST00000520948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.26■■■□□ 2.272e-6■■□□□ 11.9
VEGFA-222ENST00000520948 CLIP1P30622 1438 aa29.25■■■□□ 2.27
VEGFA-222ENST00000520948 BCORL1Q5H9F3 1711 aa29.25■■■□□ 2.27
VEGFA-222ENST00000520948 RICTORQ6R327 1708 aa29.25■■■□□ 2.27
VEGFA-222ENST00000520948 CDK13Q14004 1512 aaKnown RBP29.25■■■□□ 2.27
VEGFA-222ENST00000520948 PTPRMP28827 1452 aa29.24■■■□□ 2.27
VEGFA-222ENST00000520948 CFAP74Q9C0B2 1584 aa29.23■■■□□ 2.27
VEGFA-222ENST00000520948 FANCAO15360 1455 aa29.23■■■□□ 2.27
VEGFA-222ENST00000520948 ARHGEF40Q8TER5 1519 aa29.22■■■□□ 2.27
VEGFA-222ENST00000520948 ARID4BQ4LE39 1312 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-222ENST00000520948 MADDQ8WXG6 1647 aa29.21■■■□□ 2.27
VEGFA-222ENST00000520948 DENND4BO75064 1496 aaPredicted RBP29.21■■■□□ 2.27
VEGFA-222ENST00000520948 AKNAQ7Z591 1439 aa29.2■■■□□ 2.27
VEGFA-222ENST00000520948 CEP162Q5TB80 1403 aa29.2■■■□□ 2.26
VEGFA-222ENST00000520948 FMN1Q68DA7 1419 aa29.15■■■□□ 2.26
VEGFA-222ENST00000520948 RIMS1Q86UR5 1692 aaKnown RBP29.12■■■□□ 2.25
VEGFA-222ENST00000520948 HECW1Q76N89 1606 aa29.1■■■□□ 2.25
VEGFA-222ENST00000520948 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
VEGFA-222ENST00000520948 ZMYM4Q5VZL5 1548 aa29.1■■■□□ 2.25
VEGFA-222ENST00000520948 SIGLEC1Q9BZZ2 1709 aa29.08■■■□□ 2.25
VEGFA-222ENST00000520948 ZFYVE16Q7Z3T8 1539 aa29.07■■■□□ 2.24
VEGFA-222ENST00000520948 YEATS2Q9ULM3 1422 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms