RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 RAB3GAP2Q9H2M9 1393 aa23.25■■□□□ 1.31
SCUBE2-207ENST00000520467 CUX2O14529 1486 aa23.25■■□□□ 1.31
SCUBE2-207ENST00000520467 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
SCUBE2-207ENST00000520467 IGF1RP08069 1367 aa23.21■■□□□ 1.31
SCUBE2-207ENST00000520467 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
SCUBE2-207ENST00000520467 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
SCUBE2-207ENST00000520467 ANP32CO43423 234 aa23.15■■□□□ 1.3
SCUBE2-207ENST00000520467 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
SCUBE2-207ENST00000520467 IRX6P78412 446 aaPredicted RBP23.13■■□□□ 1.29
SCUBE2-207ENST00000520467 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
SCUBE2-207ENST00000520467 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
SCUBE2-207ENST00000520467 FGD5Q6ZNL6 1462 aa23.1■■□□□ 1.29
SCUBE2-207ENST00000520467 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
SCUBE2-207ENST00000520467 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
SCUBE2-207ENST00000520467 MSH5O43196 834 aa23.08■■□□□ 1.29
SCUBE2-207ENST00000520467 ERICH6Q7L0X2 663 aa23.08■■□□□ 1.28
SCUBE2-207ENST00000520467 PRDM2Q13029 1718 aa23.08■■□□□ 1.28
SCUBE2-207ENST00000520467 P3H3Q8IVL6 736 aa23.04■■□□□ 1.28
SCUBE2-207ENST00000520467 SETD5Q9C0A6 1442 aa23.03■■□□□ 1.28
SCUBE2-207ENST00000520467 TIAM1Q13009 1591 aa22.99■■□□□ 1.27
SCUBE2-207ENST00000520467 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
SCUBE2-207ENST00000520467 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
SCUBE2-207ENST00000520467 CDK11AQ9UQ88 783 aaPredicted RBP22.95■■□□□ 1.27
SCUBE2-207ENST00000520467 FANCD2Q9BXW9 1451 aa22.95■■□□□ 1.26
SCUBE2-207ENST00000520467 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
SCUBE2-207ENST00000520467 MAP3K1Q13233 1512 aa22.93■■□□□ 1.26
SCUBE2-207ENST00000520467 PHLDB1Q86UU1 1377 aa22.92■■□□□ 1.26
SCUBE2-207ENST00000520467 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
SCUBE2-207ENST00000520467 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
SCUBE2-207ENST00000520467 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.26
SCUBE2-207ENST00000520467 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
SCUBE2-207ENST00000520467 TONSLQ96HA7 1378 aa22.85■■□□□ 1.25
SCUBE2-207ENST00000520467 PCF11O94913 1555 aaKnown RBP22.82■■□□□ 1.24
SCUBE2-207ENST00000520467 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
SCUBE2-207ENST00000520467 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
SCUBE2-207ENST00000520467 FANCIQ9NVI1 1328 aa22.79■■□□□ 1.24
SCUBE2-207ENST00000520467 TOPBP1Q92547 1522 aa22.79■■□□□ 1.24
SCUBE2-207ENST00000520467 NESP48681 1621 aa22.78■■□□□ 1.24
SCUBE2-207ENST00000520467 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
SCUBE2-207ENST00000520467 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
SCUBE2-207ENST00000520467 CFAP43Q8NDM7 1665 aa22.74■■□□□ 1.23
SCUBE2-207ENST00000520467 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
SCUBE2-207ENST00000520467 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
SCUBE2-207ENST00000520467 FYCO1Q9BQS8 1478 aa22.71■■□□□ 1.23
SCUBE2-207ENST00000520467 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
SCUBE2-207ENST00000520467 NBR1Q14596 966 aa22.67■■□□□ 1.22
SCUBE2-207ENST00000520467 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
SCUBE2-207ENST00000520467 DEKP35659 375 aaKnown RBP22.65■■□□□ 1.22
SCUBE2-207ENST00000520467 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
SCUBE2-207ENST00000520467 CUL7Q14999 1698 aa22.64■■□□□ 1.21
SCUBE2-207ENST00000520467 PPP4R2Q9NY27 417 aa22.64■■□□□ 1.21
SCUBE2-207ENST00000520467 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
SCUBE2-207ENST00000520467 FMN1Q68DA7 1419 aa22.63■■□□□ 1.21
SCUBE2-207ENST00000520467 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
SCUBE2-207ENST00000520467 CNGB1Q14028 1251 aaPredicted RBP22.63■■□□□ 1.21
SCUBE2-207ENST00000520467 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
SCUBE2-207ENST00000520467 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
SCUBE2-207ENST00000520467 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
SCUBE2-207ENST00000520467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.21
SCUBE2-207ENST00000520467 FGD6Q6ZV73 1430 aa22.58■■□□□ 1.21
SCUBE2-207ENST00000520467 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
SCUBE2-207ENST00000520467 WASHC2AQ641Q2 1341 aa22.56■■□□□ 1.2
SCUBE2-207ENST00000520467 CCDC18Q5T9S5 1454 aa22.54■■□□□ 1.2
SCUBE2-207ENST00000520467 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
SCUBE2-207ENST00000520467 MRS2Q9HD23 443 aa22.53■■□□□ 1.2
SCUBE2-207ENST00000520467 SENP3-EIF4A1A0A087X0R7 540 aa22.52■■□□□ 1.2
SCUBE2-207ENST00000520467 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
SCUBE2-207ENST00000520467 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
SCUBE2-207ENST00000520467 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
SCUBE2-207ENST00000520467 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
SCUBE2-207ENST00000520467 PAK3O75914 559 aaPredicted RBP22.48■■□□□ 1.19
SCUBE2-207ENST00000520467 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
SCUBE2-207ENST00000520467 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
SCUBE2-207ENST00000520467 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
SCUBE2-207ENST00000520467 DNAJC5BQ9UF47 199 aa22.46■■□□□ 1.19
SCUBE2-207ENST00000520467 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
SCUBE2-207ENST00000520467 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
SCUBE2-207ENST00000520467 MYT1LQ9UL68 1186 aa22.45■■□□□ 1.18
SCUBE2-207ENST00000520467 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
SCUBE2-207ENST00000520467 UACAQ9BZF9 1416 aa22.44■■□□□ 1.18
SCUBE2-207ENST00000520467 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
SCUBE2-207ENST00000520467 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
SCUBE2-207ENST00000520467 SAMD9Q5K651 1589 aa22.43■■□□□ 1.18
SCUBE2-207ENST00000520467 MYOM3Q5VTT5 1437 aa22.43■■□□□ 1.18
SCUBE2-207ENST00000520467 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
SCUBE2-207ENST00000520467 PRKRIP1Q9H875 184 aaPredicted RBP22.4■■□□□ 1.18
SCUBE2-207ENST00000520467 C11orf95C9JLR9 678 aaPredicted RBP22.4■■□□□ 1.18
SCUBE2-207ENST00000520467 FOXD1Q16676 465 aa22.39■■□□□ 1.17
SCUBE2-207ENST00000520467 POLR3GLQ9BT43 218 aa22.39■■□□□ 1.17
SCUBE2-207ENST00000520467 NAIPQ13075 1403 aa22.38■■□□□ 1.17
SCUBE2-207ENST00000520467 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
SCUBE2-207ENST00000520467 LRRIQ1Q96JM4 1722 aa22.36■■□□□ 1.17
SCUBE2-207ENST00000520467 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
SCUBE2-207ENST00000520467 CCDC136Q96JN2 1154 aa22.34■■□□□ 1.17
SCUBE2-207ENST00000520467 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
SCUBE2-207ENST00000520467 SUPT6HQ7KZ85 1726 aaKnown RBP22.34■■□□□ 1.17
SCUBE2-207ENST00000520467 EHBP1L1Q8N3D4 1523 aa22.33■■□□□ 1.17
SCUBE2-207ENST00000520467 ANP32AP39687 249 aaKnown RBP22.33■■□□□ 1.17
SCUBE2-207ENST00000520467 RTL5Q5HYW3 569 aaPredicted RBP22.33■■□□□ 1.17
SCUBE2-207ENST00000520467 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms