RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 NISCHQ9Y2I1 1504 aa32.45■■■□□ 2.79
SCUBE2-207ENST00000520467 SHROOM4Q9ULL8 1493 aa28.1■■■□□ 2.09
SCUBE2-207ENST00000520467 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
SCUBE2-207ENST00000520467 HRCP23327 699 aa27.53■■■□□ 2
SCUBE2-207ENST00000520467 CCDC180Q9P1Z9 1646 aa27.44■■□□□ 1.98
SCUBE2-207ENST00000520467 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
SCUBE2-207ENST00000520467 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
SCUBE2-207ENST00000520467 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
SCUBE2-207ENST00000520467 MYO15BQ96JP2 1530 aa27.18■■□□□ 1.94
SCUBE2-207ENST00000520467 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
SCUBE2-207ENST00000520467 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
SCUBE2-207ENST00000520467 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
SCUBE2-207ENST00000520467 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
SCUBE2-207ENST00000520467 TRIM26Q12899 539 aaPredicted RBP26.32■■□□□ 1.8
SCUBE2-207ENST00000520467 PELP1Q8IZL8 1130 aaKnown RBP26.03■■□□□ 1.76
SCUBE2-207ENST00000520467 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
SCUBE2-207ENST00000520467 EHMT2Q96KQ7 1210 aa25.95■■□□□ 1.75
SCUBE2-207ENST00000520467 ZEB1P37275 1124 aaPredicted RBP25.94■■□□□ 1.74
SCUBE2-207ENST00000520467 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
SCUBE2-207ENST00000520467 ABCC9O60706 1549 aa25.88■■□□□ 1.73
SCUBE2-207ENST00000520467 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
SCUBE2-207ENST00000520467 RSF1Q96T23 1441 aaPredicted RBP25.75■■□□□ 1.71
SCUBE2-207ENST00000520467 TRIM41Q8WV44 630 aa25.72■■□□□ 1.71
SCUBE2-207ENST00000520467 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
SCUBE2-207ENST00000520467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
SCUBE2-207ENST00000520467 NACADO15069 1562 aa25.43■■□□□ 1.66
SCUBE2-207ENST00000520467 NEUROD1Q13562 356 aa25.4■■□□□ 1.66
SCUBE2-207ENST00000520467 ACIN1Q9UKV3 1341 aaKnown RBP25.38■■□□□ 1.65
SCUBE2-207ENST00000520467 CECR2Q9BXF3 1484 aa25.37■■□□□ 1.65
SCUBE2-207ENST00000520467 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
SCUBE2-207ENST00000520467 GTF3C3Q9Y5Q9 886 aa25.28■■□□□ 1.64
SCUBE2-207ENST00000520467 MROH2BQ7Z745 1585 aa25.26■■□□□ 1.63
SCUBE2-207ENST00000520467 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
SCUBE2-207ENST00000520467 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
SCUBE2-207ENST00000520467 CENPBP07199 599 aaPredicted RBP25.15■■□□□ 1.62
SCUBE2-207ENST00000520467 WIZO95785 1651 aa25.11■■□□□ 1.61
SCUBE2-207ENST00000520467 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
SCUBE2-207ENST00000520467 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
SCUBE2-207ENST00000520467 MYT1Q01538 1121 aa24.86■■□□□ 1.57
SCUBE2-207ENST00000520467 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
SCUBE2-207ENST00000520467 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
SCUBE2-207ENST00000520467 ZNF316A6NFI3 1004 aaPredicted RBP24.68■■□□□ 1.54
SCUBE2-207ENST00000520467 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
SCUBE2-207ENST00000520467 CCDC88BA6NC98 1476 aa24.65■■□□□ 1.54
SCUBE2-207ENST00000520467 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
SCUBE2-207ENST00000520467 MIER1Q8N108 512 aa24.57■■□□□ 1.52
SCUBE2-207ENST00000520467 SMARCA2P51531 1590 aa24.57■■□□□ 1.52
SCUBE2-207ENST00000520467 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
SCUBE2-207ENST00000520467 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
SCUBE2-207ENST00000520467 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
SCUBE2-207ENST00000520467 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
SCUBE2-207ENST00000520467 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
SCUBE2-207ENST00000520467 SOGA1O94964 1423 aa24.44■■□□□ 1.5
SCUBE2-207ENST00000520467 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
SCUBE2-207ENST00000520467 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SCUBE2-207ENST00000520467 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
SCUBE2-207ENST00000520467 TNIKQ9UKE5 1360 aa24.31■■□□□ 1.48
SCUBE2-207ENST00000520467 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
SCUBE2-207ENST00000520467 EEA1Q15075 1411 aa24.28■■□□□ 1.48
SCUBE2-207ENST00000520467 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
SCUBE2-207ENST00000520467 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
SCUBE2-207ENST00000520467 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
SCUBE2-207ENST00000520467 APLP2Q06481 763 aa24.08■■□□□ 1.45
SCUBE2-207ENST00000520467 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
SCUBE2-207ENST00000520467 SUPT16HQ9Y5B9 1047 aaKnown RBP24.04■■□□□ 1.44
SCUBE2-207ENST00000520467 SYNJ1O43426 1573 aa24.03■■□□□ 1.44
SCUBE2-207ENST00000520467 BAZ1BQ9UIG0 1483 aaKnown RBP24.03■■□□□ 1.44
SCUBE2-207ENST00000520467 CEP164Q9UPV0 1460 aa24■■□□□ 1.43
SCUBE2-207ENST00000520467 CLIP1P30622 1438 aa23.91■■□□□ 1.42
SCUBE2-207ENST00000520467 KIF21BO75037 1637 aa23.89■■□□□ 1.41
SCUBE2-207ENST00000520467 TSHZ2Q9NRE2 1034 aa23.85■■□□□ 1.41
SCUBE2-207ENST00000520467 BCANQ96GW7 911 aa23.84■■□□□ 1.41
SCUBE2-207ENST00000520467 RAPGEF2Q9Y4G8 1499 aa23.83■■□□□ 1.4
SCUBE2-207ENST00000520467 VPS8Q8N3P4 1428 aa23.79■■□□□ 1.4
SCUBE2-207ENST00000520467 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
SCUBE2-207ENST00000520467 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
SCUBE2-207ENST00000520467 KCNH8Q96L42 1107 aa23.73■■□□□ 1.39
SCUBE2-207ENST00000520467 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
SCUBE2-207ENST00000520467 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
SCUBE2-207ENST00000520467 ITGAEP38570 1179 aa23.7■■□□□ 1.38
SCUBE2-207ENST00000520467 FKBP8Q14318 412 aa23.59■■□□□ 1.37
SCUBE2-207ENST00000520467 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.37
SCUBE2-207ENST00000520467 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
SCUBE2-207ENST00000520467 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
SCUBE2-207ENST00000520467 BCL11AQ9H165 835 aa23.56■■□□□ 1.36
SCUBE2-207ENST00000520467 PRXQ9BXM0 1461 aa23.54■■□□□ 1.36
SCUBE2-207ENST00000520467 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
SCUBE2-207ENST00000520467 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
SCUBE2-207ENST00000520467 CUX1P39880 1505 aa23.5■■□□□ 1.35
SCUBE2-207ENST00000520467 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
SCUBE2-207ENST00000520467 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
SCUBE2-207ENST00000520467 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
SCUBE2-207ENST00000520467 NEFLP07196 543 aa23.41■■□□□ 1.34
SCUBE2-207ENST00000520467 CFTRP13569 1480 aa23.4■■□□□ 1.34
SCUBE2-207ENST00000520467 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
SCUBE2-207ENST00000520467 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
SCUBE2-207ENST00000520467 RBM19Q9Y4C8 960 aaKnown RBP23.35■■□□□ 1.33
SCUBE2-207ENST00000520467 CCNB3Q8WWL7 1395 aa23.29■■□□□ 1.32
SCUBE2-207ENST00000520467 SIN3AQ96ST3 1273 aa23.28■■□□□ 1.32
SCUBE2-207ENST00000520467 ARHGAP35Q9NRY4 1499 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms