RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
MRPS28-205ENST00000519386 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
MRPS28-205ENST00000519386 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
MRPS28-205ENST00000519386 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
MRPS28-205ENST00000519386 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
MRPS28-205ENST00000519386 PBRM1Q86U86 1689 aa11.91□□□□□ -0.5
MRPS28-205ENST00000519386 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
MRPS28-205ENST00000519386 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
MRPS28-205ENST00000519386 EEA1Q15075 1411 aa11.9□□□□□ -0.5
MRPS28-205ENST00000519386 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
MRPS28-205ENST00000519386 CAPN15O75808 1086 aa11.87□□□□□ -0.51
MRPS28-205ENST00000519386 APLP2Q06481 763 aa11.87□□□□□ -0.51
MRPS28-205ENST00000519386 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
MRPS28-205ENST00000519386 CHD1O14646 1710 aa11.86□□□□□ -0.51
MRPS28-205ENST00000519386 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
MRPS28-205ENST00000519386 ERICH3Q5RHP9 1530 aa11.85□□□□□ -0.51
MRPS28-205ENST00000519386 FBLN2P98095 1184 aa11.83□□□□□ -0.52
MRPS28-205ENST00000519386 ADAMTS12P58397 1594 aa11.83□□□□□ -0.52
MRPS28-205ENST00000519386 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
MRPS28-205ENST00000519386 RUSC2Q8N2Y8 1516 aa11.81□□□□□ -0.52
MRPS28-205ENST00000519386 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
MRPS28-205ENST00000519386 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
MRPS28-205ENST00000519386 IGF1RP08069 1367 aa11.79□□□□□ -0.52
MRPS28-205ENST00000519386 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
MRPS28-205ENST00000519386 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
MRPS28-205ENST00000519386 DSG3P32926 999 aa11.78□□□□□ -0.52
MRPS28-205ENST00000519386 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
MRPS28-205ENST00000519386 KIF21BO75037 1637 aa11.77□□□□□ -0.53
MRPS28-205ENST00000519386 CUL7Q14999 1698 aa11.77□□□□□ -0.53
MRPS28-205ENST00000519386 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
MRPS28-205ENST00000519386 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
MRPS28-205ENST00000519386 CARMIL1Q5VZK9 1371 aa11.73□□□□□ -0.53
MRPS28-205ENST00000519386 CEP170Q5SW79 1584 aa11.71□□□□□ -0.53
MRPS28-205ENST00000519386 CLASP1Q7Z460 1538 aa11.71□□□□□ -0.53
MRPS28-205ENST00000519386 NUP160Q12769 1436 aa11.7□□□□□ -0.54
MRPS28-205ENST00000519386 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
MRPS28-205ENST00000519386 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-205ENST00000519386 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
MRPS28-205ENST00000519386 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
MRPS28-205ENST00000519386 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
MRPS28-205ENST00000519386 GOLGA3Q08378 1498 aa11.66□□□□□ -0.54
MRPS28-205ENST00000519386 PRXQ9BXM0 1461 aa11.66□□□□□ -0.54
MRPS28-205ENST00000519386 ABCB7O75027 752 aa11.64□□□□□ -0.55
MRPS28-205ENST00000519386 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
MRPS28-205ENST00000519386 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
MRPS28-205ENST00000519386 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
MRPS28-205ENST00000519386 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
MRPS28-205ENST00000519386 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
MRPS28-205ENST00000519386 KIAA0586Q9BVV6 1533 aa11.61□□□□□ -0.55
MRPS28-205ENST00000519386 SHROOM2Q13796 1616 aa11.61□□□□□ -0.55
MRPS28-205ENST00000519386 TNIKQ9UKE5 1360 aa11.59□□□□□ -0.55
MRPS28-205ENST00000519386 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
MRPS28-205ENST00000519386 ERCC6L2Q5T890 1561 aa11.58□□□□□ -0.55
MRPS28-205ENST00000519386 JPH4Q96JJ6 628 aa11.58□□□□□ -0.56
MRPS28-205ENST00000519386 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
MRPS28-205ENST00000519386 CTTNBP2Q8WZ74 1663 aa11.57□□□□□ -0.56
MRPS28-205ENST00000519386 PRG4Q92954 1404 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-205ENST00000519386 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
MRPS28-205ENST00000519386 POLA2Q14181 598 aa11.54□□□□□ -0.56
MRPS28-205ENST00000519386 CEP162Q5TB80 1403 aa11.52□□□□□ -0.56
MRPS28-205ENST00000519386 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
MRPS28-205ENST00000519386 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
MRPS28-205ENST00000519386 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
MRPS28-205ENST00000519386 UBTFP17480 764 aaKnown RBP11.48□□□□□ -0.57
MRPS28-205ENST00000519386 CARMIL2Q6F5E8 1435 aa11.48□□□□□ -0.57
MRPS28-205ENST00000519386 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
MRPS28-205ENST00000519386 RANGAP1P46060 587 aaPredicted RBP11.44□□□□□ -0.58
MRPS28-205ENST00000519386 TTBK1Q5TCY1 1321 aaPredicted RBP11.43□□□□□ -0.58
MRPS28-205ENST00000519386 PTPRGP23470 1445 aa11.43□□□□□ -0.58
MRPS28-205ENST00000519386 SAMD9Q5K651 1589 aa11.42□□□□□ -0.58
MRPS28-205ENST00000519386 P3H3Q8IVL6 736 aa11.41□□□□□ -0.58
MRPS28-205ENST00000519386 CLIP1P30622 1438 aa11.41□□□□□ -0.58
MRPS28-205ENST00000519386 ADCY10Q96PN6 1610 aa11.38□□□□□ -0.59
MRPS28-205ENST00000519386 EFCAB5A4FU69 1503 aa11.38□□□□□ -0.59
MRPS28-205ENST00000519386 FHOD3Q2V2M9 1422 aa11.37□□□□□ -0.59
MRPS28-205ENST00000519386 VPS8Q8N3P4 1428 aa11.37□□□□□ -0.59
MRPS28-205ENST00000519386 ARHGAP35Q9NRY4 1499 aa11.36□□□□□ -0.59
MRPS28-205ENST00000519386 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
MRPS28-205ENST00000519386 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
MRPS28-205ENST00000519386 UHRF1BP1LA0JNW5 1464 aa11.34□□□□□ -0.59
MRPS28-205ENST00000519386 ABCC2Q92887 1545 aa11.34□□□□□ -0.59
MRPS28-205ENST00000519386 ABCA8O94911 1581 aa11.33□□□□□ -0.6
MRPS28-205ENST00000519386 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
MRPS28-205ENST00000519386 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
MRPS28-205ENST00000519386 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
MRPS28-205ENST00000519386 ZCCHC11Q5TAX3 1644 aaKnown RBP11.28□□□□□ -0.6
MRPS28-205ENST00000519386 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
MRPS28-205ENST00000519386 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
MRPS28-205ENST00000519386 FMN1Q68DA7 1419 aa11.27□□□□□ -0.6
MRPS28-205ENST00000519386 MAPKBP1O60336 1514 aa11.27□□□□□ -0.61
MRPS28-205ENST00000519386 MAP3K1Q13233 1512 aa11.27□□□□□ -0.61
MRPS28-205ENST00000519386 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
MRPS28-205ENST00000519386 ARID3CA6NKF2 412 aa11.26□□□□□ -0.61
MRPS28-205ENST00000519386 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
MRPS28-205ENST00000519386 ASXL2Q76L83 1435 aa11.24□□□□□ -0.61
MRPS28-205ENST00000519386 ATP10BO94823 1461 aa11.24□□□□□ -0.61
MRPS28-205ENST00000519386 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
MRPS28-205ENST00000519386 HECW1Q76N89 1606 aa11.22□□□□□ -0.61
MRPS28-205ENST00000519386 KIF13AQ9H1H9 1805 aa11.21□□□□□ -0.61
MRPS28-205ENST00000519386 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms