RNA–Protein interactions for RNA: ENST00000519278.5

NDRG1-212, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-212ENST00000519278 TIAM1Q13009 1591 aa14.03□□□□□ -0.16
NDRG1-212ENST00000519278 FGD5Q6ZNL6 1462 aa14.02□□□□□ -0.17
NDRG1-212ENST00000519278 DHX57Q6P158 1386 aaKnown RBP14.01□□□□□ -0.17
NDRG1-212ENST00000519278 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
NDRG1-212ENST00000519278 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
NDRG1-212ENST00000519278 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
NDRG1-212ENST00000519278 APLP2Q06481 763 aa13.99□□□□□ -0.17
NDRG1-212ENST00000519278 BCANQ96GW7 911 aa13.99□□□□□ -0.17
NDRG1-212ENST00000519278 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
NDRG1-212ENST00000519278 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
NDRG1-212ENST00000519278 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.18
NDRG1-212ENST00000519278 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
NDRG1-212ENST00000519278 CLSPNQ9HAW4 1339 aa13.95□□□□□ -0.18
NDRG1-212ENST00000519278 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
NDRG1-212ENST00000519278 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
NDRG1-212ENST00000519278 NESP48681 1621 aa13.94□□□□□ -0.18
NDRG1-212ENST00000519278 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
NDRG1-212ENST00000519278 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
NDRG1-212ENST00000519278 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
NDRG1-212ENST00000519278 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
NDRG1-212ENST00000519278 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
NDRG1-212ENST00000519278 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
NDRG1-212ENST00000519278 FANCD2Q9BXW9 1451 aa13.9□□□□□ -0.18
NDRG1-212ENST00000519278 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
NDRG1-212ENST00000519278 KDM5BQ9UGL1 1544 aa13.89□□□□□ -0.19
NDRG1-212ENST00000519278 RAD54L2Q9Y4B4 1467 aa13.89□□□□□ -0.19
NDRG1-212ENST00000519278 CUL7Q14999 1698 aa13.88□□□□□ -0.19
NDRG1-212ENST00000519278 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
NDRG1-212ENST00000519278 PHLDB1Q86UU1 1377 aa13.85□□□□□ -0.19
NDRG1-212ENST00000519278 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
NDRG1-212ENST00000519278 FKBP8Q14318 412 aa13.84□□□□□ -0.19
NDRG1-212ENST00000519278 ANO8Q9HCE9 1232 aaPredicted RBP13.84□□□□□ -0.19
NDRG1-212ENST00000519278 MAGI3Q5TCQ9 1506 aa13.84□□□□□ -0.19
NDRG1-212ENST00000519278 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
NDRG1-212ENST00000519278 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
NDRG1-212ENST00000519278 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
NDRG1-212ENST00000519278 DENND4BO75064 1496 aaPredicted RBP13.82□□□□□ -0.2
NDRG1-212ENST00000519278 MSH5O43196 834 aa13.81□□□□□ -0.2
NDRG1-212ENST00000519278 CCDC136Q96JN2 1154 aa13.81□□□□□ -0.2
NDRG1-212ENST00000519278 ITGAEP38570 1179 aa13.8□□□□□ -0.2
NDRG1-212ENST00000519278 MRC2Q9UBG0 1479 aa13.79□□□□□ -0.2
NDRG1-212ENST00000519278 NEFLP07196 543 aa13.79□□□□□ -0.2
NDRG1-212ENST00000519278 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
NDRG1-212ENST00000519278 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.23e-11■■■■■ 39.7
NDRG1-212ENST00000519278 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
NDRG1-212ENST00000519278 CARMIL1Q5VZK9 1371 aa13.76□□□□□ -0.21
NDRG1-212ENST00000519278 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
NDRG1-212ENST00000519278 CCNB3Q8WWL7 1395 aa13.76□□□□□ -0.21
NDRG1-212ENST00000519278 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
NDRG1-212ENST00000519278 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
NDRG1-212ENST00000519278 KDM6BO15054 1643 aa13.74□□□□□ -0.21
NDRG1-212ENST00000519278 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.22
NDRG1-212ENST00000519278 CASKIN1Q8WXD9 1431 aa13.7□□□□□ -0.22
NDRG1-212ENST00000519278 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
NDRG1-212ENST00000519278 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
NDRG1-212ENST00000519278 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
NDRG1-212ENST00000519278 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
NDRG1-212ENST00000519278 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
NDRG1-212ENST00000519278 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
NDRG1-212ENST00000519278 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
NDRG1-212ENST00000519278 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
NDRG1-212ENST00000519278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.64□□□□□ -0.232e-9■□□□□ 8.6
NDRG1-212ENST00000519278 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
NDRG1-212ENST00000519278 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
NDRG1-212ENST00000519278 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
NDRG1-212ENST00000519278 WDR62O43379 1518 aa13.62□□□□□ -0.23
NDRG1-212ENST00000519278 NBR1Q14596 966 aa13.62□□□□□ -0.23
NDRG1-212ENST00000519278 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
NDRG1-212ENST00000519278 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
NDRG1-212ENST00000519278 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
NDRG1-212ENST00000519278 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
NDRG1-212ENST00000519278 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
NDRG1-212ENST00000519278 TCOF1Q13428 1488 aaKnown RBP13.57□□□□□ -0.24
NDRG1-212ENST00000519278 HECW1Q76N89 1606 aa13.57□□□□□ -0.24
NDRG1-212ENST00000519278 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
NDRG1-212ENST00000519278 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
NDRG1-212ENST00000519278 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
NDRG1-212ENST00000519278 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
NDRG1-212ENST00000519278 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
NDRG1-212ENST00000519278 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
NDRG1-212ENST00000519278 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NDRG1-212ENST00000519278 HFM1A2PYH4 1435 aa13.52□□□□□ -0.24
NDRG1-212ENST00000519278 NCOA2Q15596 1464 aa13.52□□□□□ -0.25
NDRG1-212ENST00000519278 FANCIQ9NVI1 1328 aa13.52□□□□□ -0.25
NDRG1-212ENST00000519278 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
NDRG1-212ENST00000519278 SIN3AQ96ST3 1273 aa13.51□□□□□ -0.25
NDRG1-212ENST00000519278 DISP1Q96F81 1524 aa13.51□□□□□ -0.25
NDRG1-212ENST00000519278 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
NDRG1-212ENST00000519278 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
NDRG1-212ENST00000519278 TDRD9Q8NDG6 1382 aaKnown RBP13.49□□□□□ -0.25
NDRG1-212ENST00000519278 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
NDRG1-212ENST00000519278 CROCC2H7BZ55 1655 aa13.48□□□□□ -0.25
NDRG1-212ENST00000519278 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
NDRG1-212ENST00000519278 ZNF608Q9ULD9 1512 aaPredicted RBP13.46□□□□□ -0.25
NDRG1-212ENST00000519278 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
NDRG1-212ENST00000519278 KIAA0556O60303 1618 aa13.46□□□□□ -0.25
NDRG1-212ENST00000519278 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
NDRG1-212ENST00000519278 CCDC18Q5T9S5 1454 aa13.45□□□□□ -0.26
NDRG1-212ENST00000519278 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
NDRG1-212ENST00000519278 ADCY10Q96PN6 1610 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms