RNA–Protein interactions for RNA: ENST00000518925.5

POLB-204, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-204ENST00000518925 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
POLB-204ENST00000518925 CUX1P39880 1505 aa17.2■□□□□ 0.34
POLB-204ENST00000518925 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
POLB-204ENST00000518925 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
POLB-204ENST00000518925 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
POLB-204ENST00000518925 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
POLB-204ENST00000518925 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
POLB-204ENST00000518925 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
POLB-204ENST00000518925 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.33
POLB-204ENST00000518925 ZBTB22O15209 634 aa17.12■□□□□ 0.33
POLB-204ENST00000518925 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
POLB-204ENST00000518925 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
POLB-204ENST00000518925 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
POLB-204ENST00000518925 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
POLB-204ENST00000518925 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
POLB-204ENST00000518925 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
POLB-204ENST00000518925 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
POLB-204ENST00000518925 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
POLB-204ENST00000518925 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
POLB-204ENST00000518925 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
POLB-204ENST00000518925 ERCC6L2Q5T890 1561 aa16.9■□□□□ 0.3
POLB-204ENST00000518925 NUP160Q12769 1436 aa16.9■□□□□ 0.3
POLB-204ENST00000518925 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
POLB-204ENST00000518925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
POLB-204ENST00000518925 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
POLB-204ENST00000518925 CSRNP3Q8WYN3 585 aa16.87■□□□□ 0.29
POLB-204ENST00000518925 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
POLB-204ENST00000518925 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
POLB-204ENST00000518925 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
POLB-204ENST00000518925 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
POLB-204ENST00000518925 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
POLB-204ENST00000518925 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
POLB-204ENST00000518925 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
POLB-204ENST00000518925 JPH4Q96JJ6 628 aa16.77■□□□□ 0.28
POLB-204ENST00000518925 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
POLB-204ENST00000518925 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
POLB-204ENST00000518925 APLP2Q06481 763 aa16.73■□□□□ 0.27
POLB-204ENST00000518925 CAPN15O75808 1086 aa16.66■□□□□ 0.26
POLB-204ENST00000518925 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
POLB-204ENST00000518925 KIF13AQ9H1H9 1805 aa16.63■□□□□ 0.25
POLB-204ENST00000518925 IGF1RP08069 1367 aa16.63■□□□□ 0.25
POLB-204ENST00000518925 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
POLB-204ENST00000518925 NPM1P06748 294 aaKnown RBP eCLIP16.62■□□□□ 0.25
POLB-204ENST00000518925 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
POLB-204ENST00000518925 KIAA0586Q9BVV6 1533 aa16.58■□□□□ 0.24
POLB-204ENST00000518925 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
POLB-204ENST00000518925 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
POLB-204ENST00000518925 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
POLB-204ENST00000518925 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
POLB-204ENST00000518925 ADCY10Q96PN6 1610 aa16.55■□□□□ 0.24
POLB-204ENST00000518925 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
POLB-204ENST00000518925 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
POLB-204ENST00000518925 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
POLB-204ENST00000518925 PTPRGP23470 1445 aa16.48■□□□□ 0.23
POLB-204ENST00000518925 CUL7Q14999 1698 aa16.47■□□□□ 0.23
POLB-204ENST00000518925 DSG3P32926 999 aa16.45■□□□□ 0.22
POLB-204ENST00000518925 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
POLB-204ENST00000518925 KDM4FA0A1W2PPD8 638 aa16.43■□□□□ 0.22
POLB-204ENST00000518925 TNIKQ9UKE5 1360 aa16.42■□□□□ 0.22
POLB-204ENST00000518925 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
POLB-204ENST00000518925 KDM6BO15054 1643 aa16.4■□□□□ 0.22
POLB-204ENST00000518925 ABCC2Q92887 1545 aa16.39■□□□□ 0.21
POLB-204ENST00000518925 TSPOAP1O95153 1857 aa16.37■□□□□ 0.21
POLB-204ENST00000518925 ASXL2Q76L83 1435 aa16.36■□□□□ 0.21
POLB-204ENST00000518925 ABCB7O75027 752 aa16.35■□□□□ 0.21
POLB-204ENST00000518925 UHRF1BP1LA0JNW5 1464 aa16.35■□□□□ 0.21
POLB-204ENST00000518925 PLB1Q6P1J6 1458 aa16.35■□□□□ 0.21
POLB-204ENST00000518925 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
POLB-204ENST00000518925 UACAQ9BZF9 1416 aa16.34■□□□□ 0.21
POLB-204ENST00000518925 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
POLB-204ENST00000518925 GLI2P10070 1586 aa16.3■□□□□ 0.2
POLB-204ENST00000518925 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
POLB-204ENST00000518925 UGGT2Q9NYU1 1516 aa16.27■□□□□ 0.2
POLB-204ENST00000518925 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
POLB-204ENST00000518925 PPRC1Q5VV67 1664 aaKnown RBP16.27■□□□□ 0.19
POLB-204ENST00000518925 EPRSP07814 1512 aaKnown RBP16.26■□□□□ 0.19
POLB-204ENST00000518925 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
POLB-204ENST00000518925 POLA2Q14181 598 aa16.24■□□□□ 0.19
POLB-204ENST00000518925 KIAA0556O60303 1618 aa16.2■□□□□ 0.18
POLB-204ENST00000518925 ADGRL1O94910 1474 aa16.19■□□□□ 0.18
POLB-204ENST00000518925 ZCCHC11Q5TAX3 1644 aaKnown RBP16.18■□□□□ 0.18
POLB-204ENST00000518925 MAP3K4Q9Y6R4 1608 aa16.18■□□□□ 0.18
POLB-204ENST00000518925 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
POLB-204ENST00000518925 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
POLB-204ENST00000518925 KCNH8Q96L42 1107 aa16.12■□□□□ 0.17
POLB-204ENST00000518925 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
POLB-204ENST00000518925 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
POLB-204ENST00000518925 ILDR1Q86SU0 546 aaPredicted RBP16.1■□□□□ 0.17
POLB-204ENST00000518925 PRXQ9BXM0 1461 aa16.09■□□□□ 0.17
POLB-204ENST00000518925 ABCA8O94911 1581 aa16.09■□□□□ 0.17
POLB-204ENST00000518925 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
POLB-204ENST00000518925 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
POLB-204ENST00000518925 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
POLB-204ENST00000518925 ARID3CA6NKF2 412 aa16.02■□□□□ 0.16
POLB-204ENST00000518925 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
POLB-204ENST00000518925 EEA1Q15075 1411 aa16.02■□□□□ 0.15
POLB-204ENST00000518925 CFAP43Q8NDM7 1665 aa16.02■□□□□ 0.15
POLB-204ENST00000518925 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
POLB-204ENST00000518925 ATP10BO94823 1461 aa15.99■□□□□ 0.15
POLB-204ENST00000518925 ARAP3Q8WWN8 1544 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms