RNA–Protein interactions for RNA: ENST00000518925.5

POLB-204, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-204ENST00000518925 AEBP2Q6ZN18 517 aaPredicted RBP27.78■■■□□ 2.04
POLB-204ENST00000518925 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
POLB-204ENST00000518925 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
POLB-204ENST00000518925 PHF23Q9BUL5 403 aaPredicted RBP23.7■■□□□ 1.38
POLB-204ENST00000518925 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
POLB-204ENST00000518925 FOXD1Q16676 465 aa21.9■■□□□ 1.1
POLB-204ENST00000518925 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
POLB-204ENST00000518925 ABCC9O60706 1549 aa21.55■■□□□ 1.04
POLB-204ENST00000518925 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
POLB-204ENST00000518925 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
POLB-204ENST00000518925 ADRA2BP18089 450 aa20.91■□□□□ 0.94
POLB-204ENST00000518925 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
POLB-204ENST00000518925 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
POLB-204ENST00000518925 MSH5O43196 834 aa20.4■□□□□ 0.86
POLB-204ENST00000518925 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
POLB-204ENST00000518925 NACADO15069 1562 aa20.22■□□□□ 0.83
POLB-204ENST00000518925 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
POLB-204ENST00000518925 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
POLB-204ENST00000518925 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
POLB-204ENST00000518925 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
POLB-204ENST00000518925 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
POLB-204ENST00000518925 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
POLB-204ENST00000518925 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
POLB-204ENST00000518925 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
POLB-204ENST00000518925 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
POLB-204ENST00000518925 CECR2Q9BXF3 1484 aa19.43■□□□□ 0.7
POLB-204ENST00000518925 SCRIBQ14160 1630 aa19.43■□□□□ 0.7
POLB-204ENST00000518925 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
POLB-204ENST00000518925 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
POLB-204ENST00000518925 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
POLB-204ENST00000518925 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
POLB-204ENST00000518925 MAPK8IP2Q13387 824 aaPredicted RBP19.02■□□□□ 0.64
POLB-204ENST00000518925 DNAJC5Q9H3Z4 198 aa18.88■□□□□ 0.61
POLB-204ENST00000518925 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
POLB-204ENST00000518925 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
POLB-204ENST00000518925 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
POLB-204ENST00000518925 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
POLB-204ENST00000518925 CUX2O14529 1486 aa18.62■□□□□ 0.57
POLB-204ENST00000518925 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
POLB-204ENST00000518925 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
POLB-204ENST00000518925 KCNA4P22459 653 aa18.59■□□□□ 0.57
POLB-204ENST00000518925 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
POLB-204ENST00000518925 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
POLB-204ENST00000518925 HMGXB3Q12766 1538 aa18.51■□□□□ 0.55
POLB-204ENST00000518925 NESP48681 1621 aa18.48■□□□□ 0.55
POLB-204ENST00000518925 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
POLB-204ENST00000518925 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
POLB-204ENST00000518925 NPM3O75607 178 aaKnown RBP18.39■□□□□ 0.53
POLB-204ENST00000518925 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
POLB-204ENST00000518925 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
POLB-204ENST00000518925 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
POLB-204ENST00000518925 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
POLB-204ENST00000518925 THOC2Q8NI27 1593 aaKnown RBP18.25■□□□□ 0.51
POLB-204ENST00000518925 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
POLB-204ENST00000518925 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
POLB-204ENST00000518925 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
POLB-204ENST00000518925 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
POLB-204ENST00000518925 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
POLB-204ENST00000518925 WIZO95785 1651 aa18.03■□□□□ 0.48
POLB-204ENST00000518925 WDR62O43379 1518 aa17.99■□□□□ 0.47
POLB-204ENST00000518925 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
POLB-204ENST00000518925 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
POLB-204ENST00000518925 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
POLB-204ENST00000518925 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
POLB-204ENST00000518925 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
POLB-204ENST00000518925 CFTRP13569 1480 aa17.89■□□□□ 0.45
POLB-204ENST00000518925 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
POLB-204ENST00000518925 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
POLB-204ENST00000518925 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
POLB-204ENST00000518925 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
POLB-204ENST00000518925 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
POLB-204ENST00000518925 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
POLB-204ENST00000518925 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
POLB-204ENST00000518925 CACNB1Q02641 598 aaPredicted RBP17.57■□□□□ 0.4
POLB-204ENST00000518925 TOPBP1Q92547 1522 aa17.56■□□□□ 0.4
POLB-204ENST00000518925 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
POLB-204ENST00000518925 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
POLB-204ENST00000518925 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
POLB-204ENST00000518925 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
POLB-204ENST00000518925 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
POLB-204ENST00000518925 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
POLB-204ENST00000518925 DNMBPQ6XZF7 1577 aa17.45■□□□□ 0.38
POLB-204ENST00000518925 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
POLB-204ENST00000518925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.44■□□□□ 0.38
POLB-204ENST00000518925 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
POLB-204ENST00000518925 SLC4A2P04920 1241 aa17.41■□□□□ 0.38
POLB-204ENST00000518925 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
POLB-204ENST00000518925 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
POLB-204ENST00000518925 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
POLB-204ENST00000518925 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
POLB-204ENST00000518925 FBLN2P98095 1184 aa17.36■□□□□ 0.37
POLB-204ENST00000518925 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
POLB-204ENST00000518925 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
POLB-204ENST00000518925 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
POLB-204ENST00000518925 SOGA1O94964 1423 aa17.31■□□□□ 0.36
POLB-204ENST00000518925 CHD1O14646 1710 aa17.31■□□□□ 0.36
POLB-204ENST00000518925 ARAP1Q96P48 1450 aa17.3■□□□□ 0.36
POLB-204ENST00000518925 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
POLB-204ENST00000518925 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
POLB-204ENST00000518925 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms