RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 KIAA0586Q9BVV6 1533 aa19.63■□□□□ 0.73
AP3B1-203ENST00000517940 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
AP3B1-203ENST00000517940 GOLGA3Q08378 1498 aa19.6■□□□□ 0.73
AP3B1-203ENST00000517940 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
AP3B1-203ENST00000517940 DNAJC5Q9H3Z4 198 aa19.57■□□□□ 0.72
AP3B1-203ENST00000517940 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
AP3B1-203ENST00000517940 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
AP3B1-203ENST00000517940 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
AP3B1-203ENST00000517940 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
AP3B1-203ENST00000517940 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
AP3B1-203ENST00000517940 UGGT2Q9NYU1 1516 aa19.52■□□□□ 0.72
AP3B1-203ENST00000517940 DISP1Q96F81 1524 aa19.5■□□□□ 0.71
AP3B1-203ENST00000517940 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
AP3B1-203ENST00000517940 PRG4Q92954 1404 aaPredicted RBP19.47■□□□□ 0.71
AP3B1-203ENST00000517940 SAMD9Q5K651 1589 aa19.45■□□□□ 0.7
AP3B1-203ENST00000517940 ARAP1Q96P48 1450 aa19.45■□□□□ 0.7
AP3B1-203ENST00000517940 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
AP3B1-203ENST00000517940 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
AP3B1-203ENST00000517940 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
AP3B1-203ENST00000517940 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
AP3B1-203ENST00000517940 ARHGAP35Q9NRY4 1499 aa19.35■□□□□ 0.69
AP3B1-203ENST00000517940 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
AP3B1-203ENST00000517940 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
AP3B1-203ENST00000517940 FHOD3Q2V2M9 1422 aa19.29■□□□□ 0.68
AP3B1-203ENST00000517940 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
AP3B1-203ENST00000517940 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
AP3B1-203ENST00000517940 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
AP3B1-203ENST00000517940 ADCY10Q96PN6 1610 aa19.25■□□□□ 0.67
AP3B1-203ENST00000517940 CLIP1P30622 1438 aa19.25■□□□□ 0.67
AP3B1-203ENST00000517940 PTPRGP23470 1445 aa19.24■□□□□ 0.67
AP3B1-203ENST00000517940 ABCA8O94911 1581 aa19.23■□□□□ 0.67
AP3B1-203ENST00000517940 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
AP3B1-203ENST00000517940 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
AP3B1-203ENST00000517940 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
AP3B1-203ENST00000517940 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
AP3B1-203ENST00000517940 UACAQ9BZF9 1416 aa19.16■□□□□ 0.66
AP3B1-203ENST00000517940 UHRF1BP1LA0JNW5 1464 aa19.16■□□□□ 0.66
AP3B1-203ENST00000517940 RAPGEF6Q8TEU7 1601 aa19.14■□□□□ 0.66
AP3B1-203ENST00000517940 LRRIQ1Q96JM4 1722 aa19.12■□□□□ 0.65
AP3B1-203ENST00000517940 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
AP3B1-203ENST00000517940 NUP153P49790 1475 aaKnown RBP19.1■□□□□ 0.65
AP3B1-203ENST00000517940 KDM5BQ9UGL1 1544 aa19.08■□□□□ 0.64
AP3B1-203ENST00000517940 FMN1Q68DA7 1419 aa19.08■□□□□ 0.64
AP3B1-203ENST00000517940 ZCCHC11Q5TAX3 1644 aaKnown RBP19.07■□□□□ 0.64
AP3B1-203ENST00000517940 ATP10BO94823 1461 aa19.03■□□□□ 0.64
AP3B1-203ENST00000517940 CASKIN1Q8WXD9 1431 aa19.03■□□□□ 0.64
AP3B1-203ENST00000517940 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
AP3B1-203ENST00000517940 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
AP3B1-203ENST00000517940 FYCO1Q9BQS8 1478 aa19.01■□□□□ 0.63
AP3B1-203ENST00000517940 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
AP3B1-203ENST00000517940 MAPKBP1O60336 1514 aa19■□□□□ 0.63
AP3B1-203ENST00000517940 EPRSP07814 1512 aaKnown RBP18.98■□□□□ 0.63
AP3B1-203ENST00000517940 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
AP3B1-203ENST00000517940 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
AP3B1-203ENST00000517940 ASXL2Q76L83 1435 aa18.93■□□□□ 0.62
AP3B1-203ENST00000517940 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
AP3B1-203ENST00000517940 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
AP3B1-203ENST00000517940 DIP2BQ9P265 1576 aa18.89■□□□□ 0.62
AP3B1-203ENST00000517940 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
AP3B1-203ENST00000517940 CCDC18Q5T9S5 1454 aa18.88■□□□□ 0.61
AP3B1-203ENST00000517940 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
AP3B1-203ENST00000517940 ABCC10Q5T3U5 1492 aa18.85■□□□□ 0.61
AP3B1-203ENST00000517940 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
AP3B1-203ENST00000517940 ATP1B4Q9UN42 357 aaPredicted RBP18.83■□□□□ 0.6
AP3B1-203ENST00000517940 KIF14Q15058 1648 aa18.82■□□□□ 0.6
AP3B1-203ENST00000517940 GLI2P10070 1586 aa18.81■□□□□ 0.6
AP3B1-203ENST00000517940 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
AP3B1-203ENST00000517940 TROQ12816 1431 aaPredicted RBP18.79■□□□□ 0.6
AP3B1-203ENST00000517940 TTC37Q6PGP7 1564 aa18.78■□□□□ 0.6
AP3B1-203ENST00000517940 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
AP3B1-203ENST00000517940 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
AP3B1-203ENST00000517940 ABCA9Q8IUA7 1624 aa18.77■□□□□ 0.6
AP3B1-203ENST00000517940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.76■□□□□ 0.59
AP3B1-203ENST00000517940 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
AP3B1-203ENST00000517940 LRRC9Q6ZRR7 1453 aa18.74■□□□□ 0.59
AP3B1-203ENST00000517940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.74■□□□□ 0.59
AP3B1-203ENST00000517940 HNRNPUL2Q1KMD3 747 aaKnown RBP18.74■□□□□ 0.59
AP3B1-203ENST00000517940 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
AP3B1-203ENST00000517940 PLEKHD1A6NEE1 506 aa18.72■□□□□ 0.59
AP3B1-203ENST00000517940 FAM69CQ0P6D2 419 aa18.7■□□□□ 0.58
AP3B1-203ENST00000517940 KCNH8Q96L42 1107 aa18.7■□□□□ 0.58
AP3B1-203ENST00000517940 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
AP3B1-203ENST00000517940 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
AP3B1-203ENST00000517940 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
AP3B1-203ENST00000517940 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
AP3B1-203ENST00000517940 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
AP3B1-203ENST00000517940 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
AP3B1-203ENST00000517940 CDC42BPBQ9Y5S2 1711 aa18.64■□□□□ 0.57
AP3B1-203ENST00000517940 TRHP20396 242 aaPredicted RBP18.64■□□□□ 0.57
AP3B1-203ENST00000517940 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
AP3B1-203ENST00000517940 PREX2Q70Z35 1606 aa18.63■□□□□ 0.57
AP3B1-203ENST00000517940 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
AP3B1-203ENST00000517940 GPATCH8Q9UKJ3 1502 aaKnown RBP18.61■□□□□ 0.57
AP3B1-203ENST00000517940 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
AP3B1-203ENST00000517940 PLCH2O75038 1416 aa18.58■□□□□ 0.57
AP3B1-203ENST00000517940 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
AP3B1-203ENST00000517940 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
AP3B1-203ENST00000517940 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
AP3B1-203ENST00000517940 SAMD9LQ8IVG5 1584 aa18.54■□□□□ 0.56
AP3B1-203ENST00000517940 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms