RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
CSGALNACT1-204ENST00000517494 FAM69CQ0P6D2 419 aa26.78■■□□□ 1.88
CSGALNACT1-204ENST00000517494 KIF13AQ9H1H9 1805 aa26.78■■□□□ 1.88
CSGALNACT1-204ENST00000517494 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
CSGALNACT1-204ENST00000517494 IGF1RP08069 1367 aa26.74■■□□□ 1.87
CSGALNACT1-204ENST00000517494 KIAA0586Q9BVV6 1533 aa26.72■■□□□ 1.87
CSGALNACT1-204ENST00000517494 ABCC10Q5T3U5 1492 aa26.71■■□□□ 1.87
CSGALNACT1-204ENST00000517494 ADCY10Q96PN6 1610 aa26.69■■□□□ 1.86
CSGALNACT1-204ENST00000517494 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
CSGALNACT1-204ENST00000517494 CUL7Q14999 1698 aa26.67■■□□□ 1.86
CSGALNACT1-204ENST00000517494 MAPKBP1O60336 1514 aa26.67■■□□□ 1.86
CSGALNACT1-204ENST00000517494 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
CSGALNACT1-204ENST00000517494 CARMIL1Q5VZK9 1371 aa26.59■■□□□ 1.85
CSGALNACT1-204ENST00000517494 PTPRGP23470 1445 aa26.57■■□□□ 1.84
CSGALNACT1-204ENST00000517494 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
CSGALNACT1-204ENST00000517494 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
CSGALNACT1-204ENST00000517494 KDM6BO15054 1643 aa26.49■■□□□ 1.83
CSGALNACT1-204ENST00000517494 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
CSGALNACT1-204ENST00000517494 IQGAP2Q13576 1575 aa26.45■■□□□ 1.82
CSGALNACT1-204ENST00000517494 ABCC2Q92887 1545 aa26.42■■□□□ 1.82
CSGALNACT1-204ENST00000517494 ASXL2Q76L83 1435 aa26.39■■□□□ 1.81
CSGALNACT1-204ENST00000517494 PLB1Q6P1J6 1458 aa26.35■■□□□ 1.81
CSGALNACT1-204ENST00000517494 UACAQ9BZF9 1416 aa26.34■■□□□ 1.81
CSGALNACT1-204ENST00000517494 KDM4FA0A1W2PPD8 638 aa26.33■■□□□ 1.81
CSGALNACT1-204ENST00000517494 DISP1Q96F81 1524 aa26.33■■□□□ 1.81
CSGALNACT1-204ENST00000517494 RAPGEF2Q9Y4G8 1499 aa26.31■■□□□ 1.8
CSGALNACT1-204ENST00000517494 UHRF1BP1LA0JNW5 1464 aa26.3■■□□□ 1.8
CSGALNACT1-204ENST00000517494 GLI2P10070 1586 aa26.25■■□□□ 1.79
CSGALNACT1-204ENST00000517494 UGGT2Q9NYU1 1516 aa26.24■■□□□ 1.79
CSGALNACT1-204ENST00000517494 KIAA0556O60303 1618 aa26.21■■□□□ 1.79
CSGALNACT1-204ENST00000517494 EPRSP07814 1512 aaKnown RBP26.2■■□□□ 1.79
CSGALNACT1-204ENST00000517494 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.79
CSGALNACT1-204ENST00000517494 PPRC1Q5VV67 1664 aaKnown RBP26.2■■□□□ 1.78
CSGALNACT1-204ENST00000517494 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
CSGALNACT1-204ENST00000517494 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
CSGALNACT1-204ENST00000517494 COL17A1Q9UMD9 1497 aaPredicted RBP26.11■■□□□ 1.77
CSGALNACT1-204ENST00000517494 MAP3K4Q9Y6R4 1608 aa26.1■■□□□ 1.77
CSGALNACT1-204ENST00000517494 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
CSGALNACT1-204ENST00000517494 WDR7Q9Y4E6 1490 aa26.08■■□□□ 1.77
CSGALNACT1-204ENST00000517494 GOLGA3Q08378 1498 aa26.05■■□□□ 1.76
CSGALNACT1-204ENST00000517494 CTTNBP2Q8WZ74 1663 aa26.05■■□□□ 1.76
CSGALNACT1-204ENST00000517494 KCNH8Q96L42 1107 aa26.03■■□□□ 1.76
CSGALNACT1-204ENST00000517494 CD109Q6YHK3 1445 aa25.97■■□□□ 1.75
CSGALNACT1-204ENST00000517494 ABCA8O94911 1581 aa25.96■■□□□ 1.75
CSGALNACT1-204ENST00000517494 ARID3CA6NKF2 412 aa25.96■■□□□ 1.75
CSGALNACT1-204ENST00000517494 PRXQ9BXM0 1461 aa25.95■■□□□ 1.74
CSGALNACT1-204ENST00000517494 P3H3Q8IVL6 736 aa25.92■■□□□ 1.74
CSGALNACT1-204ENST00000517494 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
CSGALNACT1-204ENST00000517494 MAGI3Q5TCQ9 1506 aa25.88■■□□□ 1.73
CSGALNACT1-204ENST00000517494 CFAP43Q8NDM7 1665 aa25.87■■□□□ 1.73
CSGALNACT1-204ENST00000517494 ILDR1Q86SU0 546 aaPredicted RBP25.8■■□□□ 1.72
CSGALNACT1-204ENST00000517494 HECW2Q9P2P5 1572 aa25.79■■□□□ 1.72
CSGALNACT1-204ENST00000517494 ATP10BO94823 1461 aa25.78■■□□□ 1.72
CSGALNACT1-204ENST00000517494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.76■■□□□ 1.71
CSGALNACT1-204ENST00000517494 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
CSGALNACT1-204ENST00000517494 RANGAP1P46060 587 aaPredicted RBP25.75■■□□□ 1.71
CSGALNACT1-204ENST00000517494 CSRNP3Q8WYN3 585 aa25.75■■□□□ 1.71
CSGALNACT1-204ENST00000517494 KIF21BO75037 1637 aa25.71■■□□□ 1.71
CSGALNACT1-204ENST00000517494 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
CSGALNACT1-204ENST00000517494 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
CSGALNACT1-204ENST00000517494 RAPGEF6Q8TEU7 1601 aa25.66■■□□□ 1.7
CSGALNACT1-204ENST00000517494 ABCA9Q8IUA7 1624 aa25.65■■□□□ 1.7
CSGALNACT1-204ENST00000517494 RAPGEF3O95398 923 aa25.63■■□□□ 1.69
CSGALNACT1-204ENST00000517494 PHLDB1Q86UU1 1377 aa25.61■■□□□ 1.69
CSGALNACT1-204ENST00000517494 FHOD3Q2V2M9 1422 aa25.61■■□□□ 1.69
CSGALNACT1-204ENST00000517494 NUP153P49790 1475 aaKnown RBP25.58■■□□□ 1.69
CSGALNACT1-204ENST00000517494 NEO1Q92859 1461 aa25.57■■□□□ 1.68
CSGALNACT1-204ENST00000517494 ARID4BQ4LE39 1312 aaPredicted RBP25.55■■□□□ 1.68
CSGALNACT1-204ENST00000517494 EEA1Q15075 1411 aa25.54■■□□□ 1.68
CSGALNACT1-204ENST00000517494 PLEKHD1A6NEE1 506 aa25.51■■□□□ 1.67
CSGALNACT1-204ENST00000517494 PTPRMP28827 1452 aa25.49■■□□□ 1.67
CSGALNACT1-204ENST00000517494 FRMPD1Q5SYB0 1578 aa25.48■■□□□ 1.67
CSGALNACT1-204ENST00000517494 ADAMTSL3P82987 1691 aa25.45■■□□□ 1.66
CSGALNACT1-204ENST00000517494 EHMT2Q96KQ7 1210 aa25.44■■□□□ 1.66
CSGALNACT1-204ENST00000517494 DENND4BO75064 1496 aaPredicted RBP25.43■■□□□ 1.66
CSGALNACT1-204ENST00000517494 FANCAO15360 1455 aa25.41■■□□□ 1.66
CSGALNACT1-204ENST00000517494 AKNAQ7Z591 1439 aa25.41■■□□□ 1.66
CSGALNACT1-204ENST00000517494 EFCAB5A4FU69 1503 aa25.4■■□□□ 1.66
CSGALNACT1-204ENST00000517494 MADDQ8WXG6 1647 aa25.39■■□□□ 1.66
CSGALNACT1-204ENST00000517494 BCORL1Q5H9F3 1711 aa25.39■■□□□ 1.65
CSGALNACT1-204ENST00000517494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.38■■□□□ 1.65
CSGALNACT1-204ENST00000517494 ARHGEF40Q8TER5 1519 aa25.38■■□□□ 1.65
CSGALNACT1-204ENST00000517494 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
CSGALNACT1-204ENST00000517494 ATP1B4Q9UN42 357 aaPredicted RBP25.37■■□□□ 1.65
CSGALNACT1-204ENST00000517494 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
CSGALNACT1-204ENST00000517494 CDK13Q14004 1512 aaKnown RBP25.35■■□□□ 1.65
CSGALNACT1-204ENST00000517494 CFAP74Q9C0B2 1584 aa25.35■■□□□ 1.65
CSGALNACT1-204ENST00000517494 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
CSGALNACT1-204ENST00000517494 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
CSGALNACT1-204ENST00000517494 PCF11O94913 1555 aaKnown RBP25.3■■□□□ 1.64
CSGALNACT1-204ENST00000517494 RIMS1Q86UR5 1692 aaKnown RBP25.29■■□□□ 1.64
CSGALNACT1-204ENST00000517494 ZFYVE16Q7Z3T8 1539 aa25.28■■□□□ 1.64
CSGALNACT1-204ENST00000517494 POGZQ7Z3K3 1410 aa25.28■■□□□ 1.64
CSGALNACT1-204ENST00000517494 YEATS2Q9ULM3 1422 aa25.28■■□□□ 1.64
CSGALNACT1-204ENST00000517494 MLECQ14165 292 aa25.27■■□□□ 1.64
CSGALNACT1-204ENST00000517494 FBXO41Q8TF61 875 aa25.27■■□□□ 1.64
CSGALNACT1-204ENST00000517494 LMTK3Q96Q04 1460 aa25.27■■□□□ 1.64
CSGALNACT1-204ENST00000517494 ZMYM4Q5VZL5 1548 aa25.25■■□□□ 1.63
CSGALNACT1-204ENST00000517494 SCAPERQ9BY12 1400 aa25.24■■□□□ 1.63
CSGALNACT1-204ENST00000517494 PLCH2O75038 1416 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms