RNA–Protein interactions for RNA: ENST00000515096.5

LRBA-213, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 1 (best)

Gene LRBA, Length 2,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-213ENST00000515096 IGF1RP08069 1367 aa11.07□□□□□ -0.64
LRBA-213ENST00000515096 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
LRBA-213ENST00000515096 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
LRBA-213ENST00000515096 CARMIL1Q5VZK9 1371 aa11.04□□□□□ -0.64
LRBA-213ENST00000515096 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.64
LRBA-213ENST00000515096 DIEXFQ68CQ4 756 aaKnown RBP11.01□□□□□ -0.65
LRBA-213ENST00000515096 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
LRBA-213ENST00000515096 WDR97A6NE52 1622 aa11□□□□□ -0.65
LRBA-213ENST00000515096 THOC2Q8NI27 1593 aaKnown RBP11□□□□□ -0.65
LRBA-213ENST00000515096 TOPBP1Q92547 1522 aa11□□□□□ -0.65
LRBA-213ENST00000515096 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
LRBA-213ENST00000515096 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
LRBA-213ENST00000515096 FHOD3Q2V2M9 1422 aa10.97□□□□□ -0.65
LRBA-213ENST00000515096 WDR62O43379 1518 aa10.96□□□□□ -0.65
LRBA-213ENST00000515096 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.65
LRBA-213ENST00000515096 YTHDC1Q96MU7 727 aaKnown RBP10.94□□□□□ -0.66
LRBA-213ENST00000515096 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
LRBA-213ENST00000515096 FAM50AQ14320 339 aaKnown RBP10.93□□□□□ -0.66
LRBA-213ENST00000515096 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
LRBA-213ENST00000515096 ARID3CA6NKF2 412 aa10.92□□□□□ -0.66
LRBA-213ENST00000515096 PCF11O94913 1555 aaKnown RBP10.91□□□□□ -0.66
LRBA-213ENST00000515096 ABCA10Q8WWZ4 1543 aa10.9□□□□□ -0.66
LRBA-213ENST00000515096 TARBP1Q13395 1621 aaKnown RBP10.9□□□□□ -0.66
LRBA-213ENST00000515096 CCNB3Q8WWL7 1395 aa10.9□□□□□ -0.66
LRBA-213ENST00000515096 DHX57Q6P158 1386 aaKnown RBP10.89□□□□□ -0.67
LRBA-213ENST00000515096 TIAM1Q13009 1591 aa10.88□□□□□ -0.67
LRBA-213ENST00000515096 PHLDB1Q86UU1 1377 aa10.88□□□□□ -0.67
LRBA-213ENST00000515096 NEUROD1Q13562 356 aa10.88□□□□□ -0.67
LRBA-213ENST00000515096 TULP1O00294 542 aaPredicted RBP10.87□□□□□ -0.67
LRBA-213ENST00000515096 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
LRBA-213ENST00000515096 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
LRBA-213ENST00000515096 ERICH6Q7L0X2 663 aa10.85□□□□□ -0.67
LRBA-213ENST00000515096 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
LRBA-213ENST00000515096 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
LRBA-213ENST00000515096 MIER1Q8N108 512 aa10.84□□□□□ -0.67
LRBA-213ENST00000515096 GAPVD1Q14C86 1478 aa10.84□□□□□ -0.67
LRBA-213ENST00000515096 AQRO60306 1485 aaKnown RBP eCLIP10.83□□□□□ -0.68
LRBA-213ENST00000515096 CTTNBP2Q8WZ74 1663 aa10.82□□□□□ -0.68
LRBA-213ENST00000515096 RAB3GAP2Q9H2M9 1393 aa10.82□□□□□ -0.68
LRBA-213ENST00000515096 ZBTB22O15209 634 aa10.82□□□□□ -0.68
LRBA-213ENST00000515096 BCL11AQ9H165 835 aa10.82□□□□□ -0.68
LRBA-213ENST00000515096 PBRM1Q86U86 1689 aa10.81□□□□□ -0.68
LRBA-213ENST00000515096 CUL7Q14999 1698 aa10.81□□□□□ -0.68
LRBA-213ENST00000515096 FHAD1B1AJZ9 1412 aa10.8□□□□□ -0.68
LRBA-213ENST00000515096 ERCC6Q03468 1493 aa10.8□□□□□ -0.68
LRBA-213ENST00000515096 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
LRBA-213ENST00000515096 CFAP43Q8NDM7 1665 aa10.79□□□□□ -0.68
LRBA-213ENST00000515096 SIN3AQ96ST3 1273 aa10.78□□□□□ -0.68
LRBA-213ENST00000515096 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
LRBA-213ENST00000515096 MTUS2Q5JR59 1369 aa10.76□□□□□ -0.69
LRBA-213ENST00000515096 ZNF608Q9ULD9 1512 aaPredicted RBP10.76□□□□□ -0.69
LRBA-213ENST00000515096 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
LRBA-213ENST00000515096 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
LRBA-213ENST00000515096 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
LRBA-213ENST00000515096 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
LRBA-213ENST00000515096 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
LRBA-213ENST00000515096 EFCAB5A4FU69 1503 aa10.74□□□□□ -0.69
LRBA-213ENST00000515096 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
LRBA-213ENST00000515096 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
LRBA-213ENST00000515096 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
LRBA-213ENST00000515096 FBLN2P98095 1184 aa10.72□□□□□ -0.69
LRBA-213ENST00000515096 CHIC2Q9UKJ5 165 aa10.72□□□□□ -0.69
LRBA-213ENST00000515096 MAPKBP1O60336 1514 aa10.72□□□□□ -0.69
LRBA-213ENST00000515096 CENPBP07199 599 aaPredicted RBP10.72□□□□□ -0.69
LRBA-213ENST00000515096 FMN1Q68DA7 1419 aa10.71□□□□□ -0.69
LRBA-213ENST00000515096 MAP3K1Q13233 1512 aa10.7□□□□□ -0.7
LRBA-213ENST00000515096 CDK13Q14004 1512 aaKnown RBP10.69□□□□□ -0.7
LRBA-213ENST00000515096 ADAMTS12P58397 1594 aa10.69□□□□□ -0.7
LRBA-213ENST00000515096 SAMD9Q5K651 1589 aa10.69□□□□□ -0.7
LRBA-213ENST00000515096 PLEKHG5O94827 1062 aa10.68□□□□□ -0.7
LRBA-213ENST00000515096 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
LRBA-213ENST00000515096 FGD6Q6ZV73 1430 aa10.68□□□□□ -0.7
LRBA-213ENST00000515096 PTPRKQ15262 1439 aa10.68□□□□□ -0.7
LRBA-213ENST00000515096 MAGI3Q5TCQ9 1506 aa10.68□□□□□ -0.7
LRBA-213ENST00000515096 NCOA2Q15596 1464 aa10.67□□□□□ -0.7
LRBA-213ENST00000515096 ARXQ96QS3 562 aa10.67□□□□□ -0.7
LRBA-213ENST00000515096 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
LRBA-213ENST00000515096 TAOK2Q9UL54 1235 aa10.66□□□□□ -0.7
LRBA-213ENST00000515096 CLSPNQ9HAW4 1339 aa10.66□□□□□ -0.7
LRBA-213ENST00000515096 IQGAP2Q13576 1575 aa10.65□□□□□ -0.71
LRBA-213ENST00000515096 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
LRBA-213ENST00000515096 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
LRBA-213ENST00000515096 MYOM3Q5VTT5 1437 aa10.61□□□□□ -0.71
LRBA-213ENST00000515096 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
LRBA-213ENST00000515096 TRIM52Q96A61 297 aa10.61□□□□□ -0.71
LRBA-213ENST00000515096 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
LRBA-213ENST00000515096 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
LRBA-213ENST00000515096 FOXD1Q16676 465 aa10.61□□□□□ -0.71
LRBA-213ENST00000515096 DDX10Q13206 875 aaKnown RBP10.6□□□□□ -0.71
LRBA-213ENST00000515096 TPRNQ4KMQ1 711 aa10.6□□□□□ -0.71
LRBA-213ENST00000515096 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
LRBA-213ENST00000515096 EHBP1L1Q8N3D4 1523 aa10.59□□□□□ -0.71
LRBA-213ENST00000515096 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
LRBA-213ENST00000515096 EPRSP07814 1512 aaKnown RBP10.59□□□□□ -0.71
LRBA-213ENST00000515096 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
LRBA-213ENST00000515096 HECW1Q76N89 1606 aa10.58□□□□□ -0.72
LRBA-213ENST00000515096 CHD1O14646 1710 aa10.57□□□□□ -0.72
LRBA-213ENST00000515096 UGGT2Q9NYU1 1516 aa10.57□□□□□ -0.72
LRBA-213ENST00000515096 ZNF777Q9ULD5 760 aaPredicted RBP10.57□□□□□ -0.72
LRBA-213ENST00000515096 PODXL2Q9NZ53 605 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms