RNA–Protein interactions for RNA: ENST00000515096.5

LRBA-213, Transcript of LPS responsive beige-like anchor protein, humanhuman

TSL 1 (best)

Gene LRBA, Length 2,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-213ENST00000515096 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
LRBA-213ENST00000515096 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
LRBA-213ENST00000515096 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
LRBA-213ENST00000515096 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
LRBA-213ENST00000515096 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
LRBA-213ENST00000515096 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
LRBA-213ENST00000515096 ZCCHC6Q5VYS8 1495 aaKnown RBP13.08□□□□□ -0.32
LRBA-213ENST00000515096 AEBP2Q6ZN18 517 aaPredicted RBP12.95□□□□□ -0.34
LRBA-213ENST00000515096 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
LRBA-213ENST00000515096 DCAF1Q9Y4B6 1507 aa12.78□□□□□ -0.36
LRBA-213ENST00000515096 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
LRBA-213ENST00000515096 ABCC9O60706 1549 aa12.61□□□□□ -0.39
LRBA-213ENST00000515096 NACADO15069 1562 aa12.57□□□□□ -0.4
LRBA-213ENST00000515096 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
LRBA-213ENST00000515096 RB1CC1Q8TDY2 1594 aa12.46□□□□□ -0.41
LRBA-213ENST00000515096 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LRBA-213ENST00000515096 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
LRBA-213ENST00000515096 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
LRBA-213ENST00000515096 LOC105371045A0A1W2PR82 267 aa12.26□□□□□ -0.45
LRBA-213ENST00000515096 PHF23Q9BUL5 403 aaPredicted RBP12.24□□□□□ -0.45
LRBA-213ENST00000515096 CECR2Q9BXF3 1484 aa12.24□□□□□ -0.45
LRBA-213ENST00000515096 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
LRBA-213ENST00000515096 BICRAQ9NZM4 1560 aa12.15□□□□□ -0.46
LRBA-213ENST00000515096 MROH2BQ7Z745 1585 aa12.14□□□□□ -0.47
LRBA-213ENST00000515096 WIZO95785 1651 aa12.1□□□□□ -0.47
LRBA-213ENST00000515096 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
LRBA-213ENST00000515096 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
LRBA-213ENST00000515096 TRIM41Q8WV44 630 aa12.07□□□□□ -0.48
LRBA-213ENST00000515096 PLPPR3Q6T4P5 718 aa11.95□□□□□ -0.5
LRBA-213ENST00000515096 BAZ1AQ9NRL2 1556 aaPredicted RBP11.9□□□□□ -0.5
LRBA-213ENST00000515096 SMARCA4P51532 1647 aa11.87□□□□□ -0.51
LRBA-213ENST00000515096 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
LRBA-213ENST00000515096 HRCP23327 699 aa11.85□□□□□ -0.51
LRBA-213ENST00000515096 ABCC8Q09428 1581 aa11.84□□□□□ -0.51
LRBA-213ENST00000515096 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
LRBA-213ENST00000515096 TOP2AP11388 1531 aaKnown RBP11.79□□□□□ -0.52
LRBA-213ENST00000515096 PEG3Q9GZU2 1588 aa11.78□□□□□ -0.52
LRBA-213ENST00000515096 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
LRBA-213ENST00000515096 SMARCA2P51531 1590 aa11.76□□□□□ -0.53
LRBA-213ENST00000515096 EIF4G1Q04637 1599 aaKnown RBP11.76□□□□□ -0.53
LRBA-213ENST00000515096 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
LRBA-213ENST00000515096 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
LRBA-213ENST00000515096 SOGA1O94964 1423 aa11.66□□□□□ -0.54
LRBA-213ENST00000515096 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
LRBA-213ENST00000515096 KCNA4P22459 653 aa11.6□□□□□ -0.55
LRBA-213ENST00000515096 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
LRBA-213ENST00000515096 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
LRBA-213ENST00000515096 BAZ1BQ9UIG0 1483 aaKnown RBP11.59□□□□□ -0.55
LRBA-213ENST00000515096 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
LRBA-213ENST00000515096 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
LRBA-213ENST00000515096 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
LRBA-213ENST00000515096 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
LRBA-213ENST00000515096 CC2D2AQ9P2K1 1620 aa11.57□□□□□ -0.56
LRBA-213ENST00000515096 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
LRBA-213ENST00000515096 WRNQ14191 1432 aaPredicted RBP eCLIP11.54□□□□□ -0.56
LRBA-213ENST00000515096 SYNJ1O43426 1573 aa11.53□□□□□ -0.56
LRBA-213ENST00000515096 CEP162Q5TB80 1403 aa11.5□□□□□ -0.57
LRBA-213ENST00000515096 DAXXQ9UER7 740 aaPredicted RBP11.49□□□□□ -0.57
LRBA-213ENST00000515096 PRKCSHP14314 528 aaPredicted RBP11.48□□□□□ -0.57
LRBA-213ENST00000515096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
LRBA-213ENST00000515096 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
LRBA-213ENST00000515096 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
LRBA-213ENST00000515096 TNIKQ9UKE5 1360 aa11.39□□□□□ -0.59
LRBA-213ENST00000515096 RAPGEF2Q9Y4G8 1499 aa11.36□□□□□ -0.59
LRBA-213ENST00000515096 CCER1Q8TC90 406 aaPredicted RBP11.36□□□□□ -0.59
LRBA-213ENST00000515096 EEA1Q15075 1411 aa11.35□□□□□ -0.59
LRBA-213ENST00000515096 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
LRBA-213ENST00000515096 CLIP1P30622 1438 aa11.31□□□□□ -0.6
LRBA-213ENST00000515096 TOP2BQ02880 1626 aa11.3□□□□□ -0.6
LRBA-213ENST00000515096 HNRNPUL2Q1KMD3 747 aaKnown RBP11.3□□□□□ -0.6
LRBA-213ENST00000515096 CUX1P39880 1505 aa11.29□□□□□ -0.6
LRBA-213ENST00000515096 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
LRBA-213ENST00000515096 KIF21BO75037 1637 aa11.27□□□□□ -0.6
LRBA-213ENST00000515096 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
LRBA-213ENST00000515096 NCBP3Q53F19 620 aaKnown RBP11.24□□□□□ -0.61
LRBA-213ENST00000515096 CFTRP13569 1480 aa11.24□□□□□ -0.61
LRBA-213ENST00000515096 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
LRBA-213ENST00000515096 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
LRBA-213ENST00000515096 MYT1Q01538 1121 aa11.22□□□□□ -0.61
LRBA-213ENST00000515096 APLP2Q06481 763 aa11.22□□□□□ -0.61
LRBA-213ENST00000515096 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.61
LRBA-213ENST00000515096 VPS8Q8N3P4 1428 aa11.19□□□□□ -0.62
LRBA-213ENST00000515096 NESP48681 1621 aa11.18□□□□□ -0.62
LRBA-213ENST00000515096 CUX2O14529 1486 aa11.17□□□□□ -0.62
LRBA-213ENST00000515096 KIF27Q86VH2 1401 aa11.16□□□□□ -0.62
LRBA-213ENST00000515096 CADPSQ9ULU8 1353 aa11.15□□□□□ -0.62
LRBA-213ENST00000515096 PRXQ9BXM0 1461 aa11.15□□□□□ -0.63
LRBA-213ENST00000515096 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
LRBA-213ENST00000515096 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
LRBA-213ENST00000515096 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
LRBA-213ENST00000515096 ARAP1Q96P48 1450 aa11.14□□□□□ -0.63
LRBA-213ENST00000515096 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
LRBA-213ENST00000515096 ITGAEP38570 1179 aa11.12□□□□□ -0.63
LRBA-213ENST00000515096 KIF21AQ7Z4S6 1674 aa11.12□□□□□ -0.63
LRBA-213ENST00000515096 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
LRBA-213ENST00000515096 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
LRBA-213ENST00000515096 FANCD2Q9BXW9 1451 aa11.1□□□□□ -0.63
LRBA-213ENST00000515096 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
LRBA-213ENST00000515096 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
LRBA-213ENST00000515096 ADRA2BP18089 450 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms