RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 MSH5O43196 834 aa15.11■□□□□ 0.01
HERC4-214ENST00000513996 IGF1RP08069 1367 aa15.1■□□□□ 0.01
HERC4-214ENST00000513996 NUP160Q12769 1436 aa15.09■□□□□ 0.01
HERC4-214ENST00000513996 CEP170Q5SW79 1584 aa15.07■□□□□ 0
HERC4-214ENST00000513996 KIF27Q86VH2 1401 aa15.05■□□□□ -0
HERC4-214ENST00000513996 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
HERC4-214ENST00000513996 JPH4Q96JJ6 628 aa15□□□□□ -0.01
HERC4-214ENST00000513996 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
HERC4-214ENST00000513996 RUSC2Q8N2Y8 1516 aa14.97□□□□□ -0.01
HERC4-214ENST00000513996 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
HERC4-214ENST00000513996 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
HERC4-214ENST00000513996 CUL7Q14999 1698 aa14.9□□□□□ -0.02
HERC4-214ENST00000513996 TRHP20396 242 aaPredicted RBP14.9□□□□□ -0.02
HERC4-214ENST00000513996 KIAA0586Q9BVV6 1533 aa14.9□□□□□ -0.02
HERC4-214ENST00000513996 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
HERC4-214ENST00000513996 PRXQ9BXM0 1461 aa14.76□□□□□ -0.05
HERC4-214ENST00000513996 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
HERC4-214ENST00000513996 IQGAP2Q13576 1575 aa14.74□□□□□ -0.05
HERC4-214ENST00000513996 CSRNP3Q8WYN3 585 aa14.74□□□□□ -0.05
HERC4-214ENST00000513996 PTPRGP23470 1445 aa14.74□□□□□ -0.05
HERC4-214ENST00000513996 TNIKQ9UKE5 1360 aa14.72□□□□□ -0.05
HERC4-214ENST00000513996 DISP1Q96F81 1524 aa14.71□□□□□ -0.05
HERC4-214ENST00000513996 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
HERC4-214ENST00000513996 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
HERC4-214ENST00000513996 UGGT2Q9NYU1 1516 aa14.69□□□□□ -0.06
HERC4-214ENST00000513996 ADCY10Q96PN6 1610 aa14.69□□□□□ -0.06
HERC4-214ENST00000513996 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
HERC4-214ENST00000513996 FAM69CQ0P6D2 419 aa14.63□□□□□ -0.07
HERC4-214ENST00000513996 EEA1Q15075 1411 aa14.62□□□□□ -0.07
HERC4-214ENST00000513996 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
HERC4-214ENST00000513996 KIAA0556O60303 1618 aa14.61□□□□□ -0.07
HERC4-214ENST00000513996 MAPKBP1O60336 1514 aa14.61□□□□□ -0.07
HERC4-214ENST00000513996 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
HERC4-214ENST00000513996 CTTNBP2Q8WZ74 1663 aa14.59□□□□□ -0.07
HERC4-214ENST00000513996 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
HERC4-214ENST00000513996 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
HERC4-214ENST00000513996 ABCC2Q92887 1545 aa14.59□□□□□ -0.07
HERC4-214ENST00000513996 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
HERC4-214ENST00000513996 GOLGA3Q08378 1498 aa14.56□□□□□ -0.08
HERC4-214ENST00000513996 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
HERC4-214ENST00000513996 ASXL2Q76L83 1435 aa14.54□□□□□ -0.08
HERC4-214ENST00000513996 KDM5BQ9UGL1 1544 aa14.54□□□□□ -0.08
HERC4-214ENST00000513996 DIP2BQ9P265 1576 aa14.53□□□□□ -0.08
HERC4-214ENST00000513996 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
HERC4-214ENST00000513996 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
HERC4-214ENST00000513996 ABCA8O94911 1581 aa14.49□□□□□ -0.09
HERC4-214ENST00000513996 KIF21BO75037 1637 aa14.48□□□□□ -0.09
HERC4-214ENST00000513996 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
HERC4-214ENST00000513996 ZCCHC11Q5TAX3 1644 aaKnown RBP14.46□□□□□ -0.09
HERC4-214ENST00000513996 UBTFP17480 764 aaKnown RBP14.45□□□□□ -0.1
HERC4-214ENST00000513996 SAMD9Q5K651 1589 aa14.45□□□□□ -0.1
HERC4-214ENST00000513996 EPRSP07814 1512 aaKnown RBP14.45□□□□□ -0.1
HERC4-214ENST00000513996 GLI2P10070 1586 aa14.43□□□□□ -0.1
HERC4-214ENST00000513996 FHOD3Q2V2M9 1422 aa14.43□□□□□ -0.1
HERC4-214ENST00000513996 ATP10BO94823 1461 aa14.43□□□□□ -0.1
HERC4-214ENST00000513996 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
HERC4-214ENST00000513996 KCNH8Q96L42 1107 aa14.42□□□□□ -0.1
HERC4-214ENST00000513996 WDR7Q9Y4E6 1490 aa14.4□□□□□ -0.1
HERC4-214ENST00000513996 PPRC1Q5VV67 1664 aaKnown RBP14.38□□□□□ -0.11
HERC4-214ENST00000513996 RAPGEF6Q8TEU7 1601 aa14.35□□□□□ -0.11
HERC4-214ENST00000513996 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
HERC4-214ENST00000513996 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
HERC4-214ENST00000513996 MAP3K4Q9Y6R4 1608 aa14.34□□□□□ -0.11
HERC4-214ENST00000513996 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
HERC4-214ENST00000513996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
HERC4-214ENST00000513996 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
HERC4-214ENST00000513996 KDM6BO15054 1643 aa14.33□□□□□ -0.12
HERC4-214ENST00000513996 CD109Q6YHK3 1445 aa14.32□□□□□ -0.12
HERC4-214ENST00000513996 ARHGAP35Q9NRY4 1499 aa14.32□□□□□ -0.12
HERC4-214ENST00000513996 MAGI3Q5TCQ9 1506 aa14.28□□□□□ -0.12
HERC4-214ENST00000513996 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
HERC4-214ENST00000513996 PLEKHD1A6NEE1 506 aa14.27□□□□□ -0.13
HERC4-214ENST00000513996 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
HERC4-214ENST00000513996 CFAP43Q8NDM7 1665 aa14.24□□□□□ -0.13
HERC4-214ENST00000513996 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
HERC4-214ENST00000513996 KDM4FA0A1W2PPD8 638 aa14.23□□□□□ -0.13
HERC4-214ENST00000513996 POTEDQ86YR6 584 aa14.23□□□□□ -0.13
HERC4-214ENST00000513996 CDK13Q14004 1512 aaKnown RBP14.23□□□□□ -0.13
HERC4-214ENST00000513996 ABCA9Q8IUA7 1624 aa14.22□□□□□ -0.13
HERC4-214ENST00000513996 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
HERC4-214ENST00000513996 RAPGEF3O95398 923 aa14.17□□□□□ -0.14
HERC4-214ENST00000513996 CLIP1P30622 1438 aa14.16□□□□□ -0.14
HERC4-214ENST00000513996 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
HERC4-214ENST00000513996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.145e-7■□□□□ 10.2
HERC4-214ENST00000513996 PHLDB1Q86UU1 1377 aa14.15□□□□□ -0.14
HERC4-214ENST00000513996 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
HERC4-214ENST00000513996 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
HERC4-214ENST00000513996 NEO1Q92859 1461 aa14.13□□□□□ -0.15
HERC4-214ENST00000513996 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
HERC4-214ENST00000513996 TROQ12816 1431 aaPredicted RBP14.11□□□□□ -0.15
HERC4-214ENST00000513996 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
HERC4-214ENST00000513996 AKNAQ7Z591 1439 aa14.11□□□□□ -0.15
HERC4-214ENST00000513996 LRRIQ1Q96JM4 1722 aa14.11□□□□□ -0.15
HERC4-214ENST00000513996 PLCH2O75038 1416 aa14.1□□□□□ -0.15
HERC4-214ENST00000513996 PCF11O94913 1555 aaKnown RBP14.09□□□□□ -0.15
HERC4-214ENST00000513996 FANCAO15360 1455 aa14.09□□□□□ -0.15
HERC4-214ENST00000513996 ADGRL1O94910 1474 aa14.07□□□□□ -0.16
HERC4-214ENST00000513996 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
HERC4-214ENST00000513996 KIF14Q15058 1648 aa14.07□□□□□ -0.16
HERC4-214ENST00000513996 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms