RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 PAXIP1Q6ZW49 1069 aaPredicted RBP10.45□□□□□ -0.74
NIPBL-207ENST00000513819 RASEFQ8IZ41 740 aa10.45□□□□□ -0.74
NIPBL-207ENST00000513819 RNF25Q96BH1 459 aaPredicted RBP10.45□□□□□ -0.74
NIPBL-207ENST00000513819 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
NIPBL-207ENST00000513819 CFAP44Q96MT7 982 aa10.44□□□□□ -0.74
NIPBL-207ENST00000513819 CHADLQ6NUI6 762 aa10.42□□□□□ -0.74
NIPBL-207ENST00000513819 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
NIPBL-207ENST00000513819 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
NIPBL-207ENST00000513819 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
NIPBL-207ENST00000513819 PYGBP11216 843 aa10.34□□□□□ -0.75
NIPBL-207ENST00000513819 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
NIPBL-207ENST00000513819 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
NIPBL-207ENST00000513819 VSIG10Q8N0Z9 540 aa10.33□□□□□ -0.76
NIPBL-207ENST00000513819 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
NIPBL-207ENST00000513819 PRKAR2AP13861 404 aaKnown RBP10.3□□□□□ -0.76
NIPBL-207ENST00000513819 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
NIPBL-207ENST00000513819 TSPYL2Q9H2G4 693 aaPredicted RBP10.29□□□□□ -0.76
NIPBL-207ENST00000513819 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
NIPBL-207ENST00000513819 TSHZ2Q9NRE2 1034 aa10.28□□□□□ -0.76
NIPBL-207ENST00000513819 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
NIPBL-207ENST00000513819 STK25O00506 426 aa10.27□□□□□ -0.77
NIPBL-207ENST00000513819 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■□□□ 11.9
NIPBL-207ENST00000513819 NKX1-1Q15270 411 aaPredicted RBP10.26□□□□□ -0.77
NIPBL-207ENST00000513819 DNAJC5Q9H3Z4 198 aa10.25□□□□□ -0.77
NIPBL-207ENST00000513819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
NIPBL-207ENST00000513819 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
NIPBL-207ENST00000513819 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
NIPBL-207ENST00000513819 SGIP1Q9BQI5 828 aa10.21□□□□□ -0.77
NIPBL-207ENST00000513819 BCL11BQ9C0K0 894 aaPredicted RBP10.21□□□□□ -0.77
NIPBL-207ENST00000513819 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
NIPBL-207ENST00000513819 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
NIPBL-207ENST00000513819 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
NIPBL-207ENST00000513819 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
NIPBL-207ENST00000513819 BCANQ96GW7 911 aa10.15□□□□□ -0.78
NIPBL-207ENST00000513819 PCDHB8Q9UN66 801 aa10.15□□□□□ -0.78
NIPBL-207ENST00000513819 PCDHB13Q9Y5F0 798 aa10.15□□□□□ -0.78
NIPBL-207ENST00000513819 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
NIPBL-207ENST00000513819 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
NIPBL-207ENST00000513819 HAX1O00165 279 aa10.09□□□□□ -0.79
NIPBL-207ENST00000513819 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
NIPBL-207ENST00000513819 PSEN1P49768 467 aa10.06□□□□□ -0.8
NIPBL-207ENST00000513819 MAP3K13O43283 966 aa10.05□□□□□ -0.8
NIPBL-207ENST00000513819 IFNL1Q8IU54 200 aa10.05□□□□□ -0.8
NIPBL-207ENST00000513819 KIF12Q96FN5 646 aa10.04□□□□□ -0.8
NIPBL-207ENST00000513819 RYDENQ9NUL5 291 aaKnown RBP10.04□□□□□ -0.8
NIPBL-207ENST00000513819 ZRANB1Q9UGI0 708 aa10.03□□□□□ -0.8
NIPBL-207ENST00000513819 CD44P16070 742 aaKnown RBP10.02□□□□□ -0.81
NIPBL-207ENST00000513819 PHF12Q96QT6 1004 aa10□□□□□ -0.81
NIPBL-207ENST00000513819 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
NIPBL-207ENST00000513819 PRKCSHP14314 528 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-207ENST00000513819 CABP2Q9NPB3 220 aa9.96□□□□□ -0.82
NIPBL-207ENST00000513819 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
NIPBL-207ENST00000513819 CADPS2Q86UW7 1296 aa9.92□□□□□ -0.82
NIPBL-207ENST00000513819 NBR1Q14596 966 aa9.91□□□□□ -0.82
NIPBL-207ENST00000513819 C19orf67A6NJJ6 358 aa9.9□□□□□ -0.82
NIPBL-207ENST00000513819 PHF8Q9UPP1 1060 aa9.9□□□□□ -0.82
NIPBL-207ENST00000513819 PPP1R37O75864 691 aa9.89□□□□□ -0.83
NIPBL-207ENST00000513819 EVX2Q03828 476 aa9.89□□□□□ -0.83
NIPBL-207ENST00000513819 TPRNQ4KMQ1 711 aa9.88□□□□□ -0.83
NIPBL-207ENST00000513819 FBXO22Q8NEZ5 403 aa9.88□□□□□ -0.83
NIPBL-207ENST00000513819 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
NIPBL-207ENST00000513819 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
NIPBL-207ENST00000513819 SOX12O15370 315 aa9.87□□□□□ -0.83
NIPBL-207ENST00000513819 NLRP6P59044 892 aa9.87□□□□□ -0.83
NIPBL-207ENST00000513819 TMEM106CQ9BVX2 250 aa9.85□□□□□ -0.83
NIPBL-207ENST00000513819 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
NIPBL-207ENST00000513819 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
NIPBL-207ENST00000513819 MS4A4AQ96JQ5 239 aa9.8□□□□□ -0.84
NIPBL-207ENST00000513819 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
NIPBL-207ENST00000513819 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
NIPBL-207ENST00000513819 MKRN3Q13064 507 aaKnown RBP9.76□□□□□ -0.85
NIPBL-207ENST00000513819 TTLL13PA6NNM8 815 aa9.75□□□□□ -0.85
NIPBL-207ENST00000513819 TIE1P35590 1138 aa9.75□□□□□ -0.85
NIPBL-207ENST00000513819 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-207ENST00000513819 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
NIPBL-207ENST00000513819 NCKAP5LQ9HCH0 1330 aa9.7□□□□□ -0.86
NIPBL-207ENST00000513819 LHX8Q68G74 356 aa9.69□□□□□ -0.86
NIPBL-207ENST00000513819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■□□ 19.2
NIPBL-207ENST00000513819 TRIM35Q9UPQ4 493 aa9.69□□□□□ -0.86
NIPBL-207ENST00000513819 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
NIPBL-207ENST00000513819 GABBR2O75899 941 aa9.66□□□□□ -0.86
NIPBL-207ENST00000513819 E2F4Q16254 413 aa9.66□□□□□ -0.86
NIPBL-207ENST00000513819 PDE4AP27815 886 aa9.65□□□□□ -0.86
NIPBL-207ENST00000513819 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
NIPBL-207ENST00000513819 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
NIPBL-207ENST00000513819 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
NIPBL-207ENST00000513819 MFSD10Q14728 455 aa9.62□□□□□ -0.87
NIPBL-207ENST00000513819 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
NIPBL-207ENST00000513819 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
NIPBL-207ENST00000513819 CLCN6P51797 869 aa9.61□□□□□ -0.87
NIPBL-207ENST00000513819 DDX27Q96GQ7 796 aaKnown RBP9.61□□□□□ -0.87
NIPBL-207ENST00000513819 ATMINO43313 823 aaPredicted RBP9.59□□□□□ -0.87
NIPBL-207ENST00000513819 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
NIPBL-207ENST00000513819 LMOD2Q6P5Q4 547 aa9.57□□□□□ -0.88
NIPBL-207ENST00000513819 PDCD7Q8N8D1 485 aaKnown RBP9.57□□□□□ -0.88
NIPBL-207ENST00000513819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
NIPBL-207ENST00000513819 SEMA3EO15041 775 aa9.55□□□□□ -0.88
NIPBL-207ENST00000513819 IRX5P78411 483 aaPredicted RBP9.55□□□□□ -0.88
NIPBL-207ENST00000513819 MICALL2Q8IY33 904 aa9.55□□□□□ -0.88
NIPBL-207ENST00000513819 GPHNQ9NQX3 736 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms