RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
TRIM23-207ENST00000513794 CARMIL1Q5VZK9 1371 aa19.68■□□□□ 0.74
TRIM23-207ENST00000513794 CLASP1Q7Z460 1538 aa19.66■□□□□ 0.74
TRIM23-207ENST00000513794 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
TRIM23-207ENST00000513794 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
TRIM23-207ENST00000513794 NUP160Q12769 1436 aa19.64■□□□□ 0.73
TRIM23-207ENST00000513794 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
TRIM23-207ENST00000513794 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
TRIM23-207ENST00000513794 ARAP1Q96P48 1450 aa19.58■□□□□ 0.72
TRIM23-207ENST00000513794 FAM9AQ8IZU1 332 aaPredicted RBP19.57■□□□□ 0.72
TRIM23-207ENST00000513794 CSRNP3Q8WYN3 585 aa19.53■□□□□ 0.72
TRIM23-207ENST00000513794 CUL7Q14999 1698 aa19.52■□□□□ 0.72
TRIM23-207ENST00000513794 PRG4Q92954 1404 aaPredicted RBP19.52■□□□□ 0.72
TRIM23-207ENST00000513794 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
TRIM23-207ENST00000513794 KIAA0586Q9BVV6 1533 aa19.49■□□□□ 0.71
TRIM23-207ENST00000513794 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
TRIM23-207ENST00000513794 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
TRIM23-207ENST00000513794 ERCC6L2Q5T890 1561 aa19.48■□□□□ 0.71
TRIM23-207ENST00000513794 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
TRIM23-207ENST00000513794 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
TRIM23-207ENST00000513794 PRXQ9BXM0 1461 aa19.36■□□□□ 0.69
TRIM23-207ENST00000513794 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRIM23-207ENST00000513794 EEA1Q15075 1411 aa19.34■□□□□ 0.69
TRIM23-207ENST00000513794 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
TRIM23-207ENST00000513794 PTPRGP23470 1445 aa19.33■□□□□ 0.68
TRIM23-207ENST00000513794 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
TRIM23-207ENST00000513794 IQGAP2Q13576 1575 aa19.3■□□□□ 0.68
TRIM23-207ENST00000513794 TNIKQ9UKE5 1360 aa19.29■□□□□ 0.68
TRIM23-207ENST00000513794 MSH5O43196 834 aa19.28■□□□□ 0.68
TRIM23-207ENST00000513794 P3H3Q8IVL6 736 aa19.28■□□□□ 0.68
TRIM23-207ENST00000513794 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
TRIM23-207ENST00000513794 DISP1Q96F81 1524 aa19.2■□□□□ 0.66
TRIM23-207ENST00000513794 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
TRIM23-207ENST00000513794 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
TRIM23-207ENST00000513794 FAM69CQ0P6D2 419 aa19.13■□□□□ 0.65
TRIM23-207ENST00000513794 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
TRIM23-207ENST00000513794 CTTNBP2Q8WZ74 1663 aa19.13■□□□□ 0.65
TRIM23-207ENST00000513794 NCBP3Q53F19 620 aaKnown RBP19.11■□□□□ 0.65
TRIM23-207ENST00000513794 SLC4A1APQ9BWU0 796 aaKnown RBP19.09■□□□□ 0.65
TRIM23-207ENST00000513794 KIAA0556O60303 1618 aa19.09■□□□□ 0.65
TRIM23-207ENST00000513794 ADCY10Q96PN6 1610 aa19.09■□□□□ 0.65
TRIM23-207ENST00000513794 ARID3CA6NKF2 412 aa19.08■□□□□ 0.64
TRIM23-207ENST00000513794 KIF21BO75037 1637 aa19.06■□□□□ 0.64
TRIM23-207ENST00000513794 ABCC2Q92887 1545 aa19.04■□□□□ 0.64
TRIM23-207ENST00000513794 UHRF1BP1LA0JNW5 1464 aa19.03■□□□□ 0.64
TRIM23-207ENST00000513794 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
TRIM23-207ENST00000513794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.02■□□□□ 0.64
TRIM23-207ENST00000513794 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.64
TRIM23-207ENST00000513794 KCNH8Q96L42 1107 aa19■□□□□ 0.63
TRIM23-207ENST00000513794 ILDR1Q86SU0 546 aaPredicted RBP18.99■□□□□ 0.63
TRIM23-207ENST00000513794 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
TRIM23-207ENST00000513794 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
TRIM23-207ENST00000513794 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
TRIM23-207ENST00000513794 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
TRIM23-207ENST00000513794 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
TRIM23-207ENST00000513794 KDM5BQ9UGL1 1544 aa18.95■□□□□ 0.62
TRIM23-207ENST00000513794 ABCA8O94911 1581 aa18.92■□□□□ 0.62
TRIM23-207ENST00000513794 SAMD9Q5K651 1589 aa18.91■□□□□ 0.62
TRIM23-207ENST00000513794 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
TRIM23-207ENST00000513794 ATP10BO94823 1461 aa18.87■□□□□ 0.61
TRIM23-207ENST00000513794 ZCCHC11Q5TAX3 1644 aaKnown RBP18.86■□□□□ 0.61
TRIM23-207ENST00000513794 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
TRIM23-207ENST00000513794 DIP2BQ9P265 1576 aa18.85■□□□□ 0.61
TRIM23-207ENST00000513794 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
TRIM23-207ENST00000513794 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
TRIM23-207ENST00000513794 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
TRIM23-207ENST00000513794 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
TRIM23-207ENST00000513794 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
TRIM23-207ENST00000513794 WDR7Q9Y4E6 1490 aa18.82■□□□□ 0.6
TRIM23-207ENST00000513794 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
TRIM23-207ENST00000513794 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
TRIM23-207ENST00000513794 FMN1Q68DA7 1419 aa18.79■□□□□ 0.6
TRIM23-207ENST00000513794 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
TRIM23-207ENST00000513794 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
TRIM23-207ENST00000513794 CLIP1P30622 1438 aa18.76■□□□□ 0.59
TRIM23-207ENST00000513794 GLI2P10070 1586 aa18.76■□□□□ 0.59
TRIM23-207ENST00000513794 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
TRIM23-207ENST00000513794 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
TRIM23-207ENST00000513794 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
TRIM23-207ENST00000513794 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
TRIM23-207ENST00000513794 TEX14Q8IWB6 1497 aa18.65■□□□□ 0.58
TRIM23-207ENST00000513794 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
TRIM23-207ENST00000513794 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
TRIM23-207ENST00000513794 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
TRIM23-207ENST00000513794 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
TRIM23-207ENST00000513794 KDM6BO15054 1643 aa18.62■□□□□ 0.57
TRIM23-207ENST00000513794 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
TRIM23-207ENST00000513794 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
TRIM23-207ENST00000513794 COL17A1Q9UMD9 1497 aaPredicted RBP18.6■□□□□ 0.57
TRIM23-207ENST00000513794 PPRC1Q5VV67 1664 aaKnown RBP18.59■□□□□ 0.57
TRIM23-207ENST00000513794 CFAP43Q8NDM7 1665 aa18.57■□□□□ 0.56
TRIM23-207ENST00000513794 RAPGEF3O95398 923 aa18.55■□□□□ 0.56
TRIM23-207ENST00000513794 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
TRIM23-207ENST00000513794 TROQ12816 1431 aaPredicted RBP18.53■□□□□ 0.56
TRIM23-207ENST00000513794 PCF11O94913 1555 aaKnown RBP18.52■□□□□ 0.56
TRIM23-207ENST00000513794 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.56
TRIM23-207ENST00000513794 PHLDB1Q86UU1 1377 aa18.52■□□□□ 0.55
TRIM23-207ENST00000513794 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIM23-207ENST00000513794 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
TRIM23-207ENST00000513794 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms