RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
TRIM23-207ENST00000513794 AEBP2Q6ZN18 517 aaPredicted RBP26.83■■□□□ 1.89
TRIM23-207ENST00000513794 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
TRIM23-207ENST00000513794 CCDC180Q9P1Z9 1646 aa24.81■■□□□ 1.56
TRIM23-207ENST00000513794 ABCC9O60706 1549 aa24.62■■□□□ 1.53
TRIM23-207ENST00000513794 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
TRIM23-207ENST00000513794 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
TRIM23-207ENST00000513794 NACADO15069 1562 aa23.46■■□□□ 1.35
TRIM23-207ENST00000513794 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.34
TRIM23-207ENST00000513794 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
TRIM23-207ENST00000513794 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
TRIM23-207ENST00000513794 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
TRIM23-207ENST00000513794 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
TRIM23-207ENST00000513794 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
TRIM23-207ENST00000513794 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
TRIM23-207ENST00000513794 SCRIBQ14160 1630 aa22.79■■□□□ 1.24
TRIM23-207ENST00000513794 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
TRIM23-207ENST00000513794 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
TRIM23-207ENST00000513794 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
TRIM23-207ENST00000513794 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
TRIM23-207ENST00000513794 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
TRIM23-207ENST00000513794 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
TRIM23-207ENST00000513794 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
TRIM23-207ENST00000513794 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
TRIM23-207ENST00000513794 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
TRIM23-207ENST00000513794 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
TRIM23-207ENST00000513794 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
TRIM23-207ENST00000513794 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
TRIM23-207ENST00000513794 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
TRIM23-207ENST00000513794 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
TRIM23-207ENST00000513794 BAZ1BQ9UIG0 1483 aaKnown RBP21.54■■□□□ 1.04
TRIM23-207ENST00000513794 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
TRIM23-207ENST00000513794 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
TRIM23-207ENST00000513794 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
TRIM23-207ENST00000513794 WIZO95785 1651 aa21.4■■□□□ 1.02
TRIM23-207ENST00000513794 NESP48681 1621 aa21.26■□□□□ 0.99
TRIM23-207ENST00000513794 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
TRIM23-207ENST00000513794 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
TRIM23-207ENST00000513794 TOP2AP11388 1531 aaKnown RBP21.13■□□□□ 0.97
TRIM23-207ENST00000513794 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
TRIM23-207ENST00000513794 CUX2O14529 1486 aa21.08■□□□□ 0.97
TRIM23-207ENST00000513794 LAMC3Q9Y6N6 1575 aa21.07■□□□□ 0.96
TRIM23-207ENST00000513794 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
TRIM23-207ENST00000513794 FOXD1Q16676 465 aa21.04■□□□□ 0.96
TRIM23-207ENST00000513794 CCDC88BA6NC98 1476 aa21■□□□□ 0.95
TRIM23-207ENST00000513794 CFTRP13569 1480 aa20.93■□□□□ 0.94
TRIM23-207ENST00000513794 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
TRIM23-207ENST00000513794 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
TRIM23-207ENST00000513794 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
TRIM23-207ENST00000513794 MRC2Q9UBG0 1479 aa20.79■□□□□ 0.92
TRIM23-207ENST00000513794 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
TRIM23-207ENST00000513794 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
TRIM23-207ENST00000513794 WDR62O43379 1518 aa20.64■□□□□ 0.9
TRIM23-207ENST00000513794 URB2Q14146 1524 aaKnown RBP20.63■□□□□ 0.89
TRIM23-207ENST00000513794 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
TRIM23-207ENST00000513794 ADRA2BP18089 450 aa20.53■□□□□ 0.88
TRIM23-207ENST00000513794 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
TRIM23-207ENST00000513794 TOPBP1Q92547 1522 aa20.49■□□□□ 0.87
TRIM23-207ENST00000513794 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
TRIM23-207ENST00000513794 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
TRIM23-207ENST00000513794 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
TRIM23-207ENST00000513794 SOGA1O94964 1423 aa20.36■□□□□ 0.85
TRIM23-207ENST00000513794 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.85
TRIM23-207ENST00000513794 POLA1P09884 1462 aaPredicted RBP20.31■□□□□ 0.84
TRIM23-207ENST00000513794 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
TRIM23-207ENST00000513794 CUX1P39880 1505 aa20.3■□□□□ 0.84
TRIM23-207ENST00000513794 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
TRIM23-207ENST00000513794 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRIM23-207ENST00000513794 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
TRIM23-207ENST00000513794 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
TRIM23-207ENST00000513794 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
TRIM23-207ENST00000513794 FBLN2P98095 1184 aa20.22■□□□□ 0.83
TRIM23-207ENST00000513794 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
TRIM23-207ENST00000513794 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
TRIM23-207ENST00000513794 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
TRIM23-207ENST00000513794 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
TRIM23-207ENST00000513794 TOP2BQ02880 1626 aa20.06■□□□□ 0.8
TRIM23-207ENST00000513794 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
TRIM23-207ENST00000513794 ABCA10Q8WWZ4 1543 aa20.03■□□□□ 0.8
TRIM23-207ENST00000513794 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
TRIM23-207ENST00000513794 BIVM-ERCC5R4GMW8 1640 aa20.01■□□□□ 0.79
TRIM23-207ENST00000513794 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
TRIM23-207ENST00000513794 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
TRIM23-207ENST00000513794 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
TRIM23-207ENST00000513794 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
TRIM23-207ENST00000513794 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 KCNA4P22459 653 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 CHD1O14646 1710 aa19.88■□□□□ 0.77
TRIM23-207ENST00000513794 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
TRIM23-207ENST00000513794 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
TRIM23-207ENST00000513794 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
TRIM23-207ENST00000513794 CYB5RLQ6IPT4 315 aa19.81■□□□□ 0.76
TRIM23-207ENST00000513794 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
TRIM23-207ENST00000513794 IGF1RP08069 1367 aa19.8■□□□□ 0.76
TRIM23-207ENST00000513794 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
TRIM23-207ENST00000513794 GRIN2AQ12879 1464 aa19.74■□□□□ 0.75
TRIM23-207ENST00000513794 ARHGEF11O15085 1522 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms