RNA–Protein interactions for RNA: ENST00000513632.2

PABPC4-218, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-218ENST00000513632 SHROOM2Q13796 1616 aa15.8■□□□□ 0.12
PABPC4-218ENST00000513632 KIF27Q86VH2 1401 aa15.8■□□□□ 0.12
PABPC4-218ENST00000513632 IGF1RP08069 1367 aa15.79■□□□□ 0.12
PABPC4-218ENST00000513632 FAM69CQ0P6D2 419 aa15.76■□□□□ 0.11
PABPC4-218ENST00000513632 KIAA0586Q9BVV6 1533 aa15.73■□□□□ 0.11
PABPC4-218ENST00000513632 CARMIL1Q5VZK9 1371 aa15.71■□□□□ 0.11
PABPC4-218ENST00000513632 RUSC2Q8N2Y8 1516 aa15.69■□□□□ 0.1
PABPC4-218ENST00000513632 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
PABPC4-218ENST00000513632 ABCC10Q5T3U5 1492 aa15.66■□□□□ 0.1
PABPC4-218ENST00000513632 PTPRGP23470 1445 aa15.66■□□□□ 0.1
PABPC4-218ENST00000513632 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
PABPC4-218ENST00000513632 CUL7Q14999 1698 aa15.64■□□□□ 0.09
PABPC4-218ENST00000513632 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
PABPC4-218ENST00000513632 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
PABPC4-218ENST00000513632 ADCY10Q96PN6 1610 aa15.57■□□□□ 0.08
PABPC4-218ENST00000513632 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
PABPC4-218ENST00000513632 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
PABPC4-218ENST00000513632 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.08
PABPC4-218ENST00000513632 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
PABPC4-218ENST00000513632 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
PABPC4-218ENST00000513632 PLB1Q6P1J6 1458 aa15.51■□□□□ 0.07
PABPC4-218ENST00000513632 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
PABPC4-218ENST00000513632 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
PABPC4-218ENST00000513632 UHRF1BP1LA0JNW5 1464 aa15.47■□□□□ 0.07
PABPC4-218ENST00000513632 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
PABPC4-218ENST00000513632 KDM6BO15054 1643 aa15.45■□□□□ 0.06
PABPC4-218ENST00000513632 DISP1Q96F81 1524 aa15.44■□□□□ 0.06
PABPC4-218ENST00000513632 UGGT2Q9NYU1 1516 aa15.43■□□□□ 0.06
PABPC4-218ENST00000513632 KDM4FA0A1W2PPD8 638 aa15.41■□□□□ 0.06
PABPC4-218ENST00000513632 KDM5BQ9UGL1 1544 aa15.39■□□□□ 0.05
PABPC4-218ENST00000513632 GLI2P10070 1586 aa15.38■□□□□ 0.05
PABPC4-218ENST00000513632 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
PABPC4-218ENST00000513632 EPRSP07814 1512 aaKnown RBP15.37■□□□□ 0.05
PABPC4-218ENST00000513632 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
PABPC4-218ENST00000513632 TEX14Q8IWB6 1497 aa15.35■□□□□ 0.05
PABPC4-218ENST00000513632 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
PABPC4-218ENST00000513632 KIAA0556O60303 1618 aa15.34■□□□□ 0.05
PABPC4-218ENST00000513632 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
PABPC4-218ENST00000513632 WDR7Q9Y4E6 1490 aa15.31■□□□□ 0.04
PABPC4-218ENST00000513632 CSRNP3Q8WYN3 585 aa15.3■□□□□ 0.04
PABPC4-218ENST00000513632 CD109Q6YHK3 1445 aa15.28■□□□□ 0.04
PABPC4-218ENST00000513632 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
PABPC4-218ENST00000513632 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
PABPC4-218ENST00000513632 COL17A1Q9UMD9 1497 aaPredicted RBP15.27■□□□□ 0.03
PABPC4-218ENST00000513632 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
PABPC4-218ENST00000513632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
PABPC4-218ENST00000513632 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
PABPC4-218ENST00000513632 MAP3K4Q9Y6R4 1608 aa15.23■□□□□ 0.03
PABPC4-218ENST00000513632 PPRC1Q5VV67 1664 aaKnown RBP15.22■□□□□ 0.03
PABPC4-218ENST00000513632 ABCA8O94911 1581 aa15.22■□□□□ 0.03
PABPC4-218ENST00000513632 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
PABPC4-218ENST00000513632 ADGRL1O94910 1474 aa15.21■□□□□ 0.03
PABPC4-218ENST00000513632 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
PABPC4-218ENST00000513632 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
PABPC4-218ENST00000513632 EEA1Q15075 1411 aa15.17■□□□□ 0.02
PABPC4-218ENST00000513632 ATP10BO94823 1461 aa15.16■□□□□ 0.02
PABPC4-218ENST00000513632 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
PABPC4-218ENST00000513632 CFAP43Q8NDM7 1665 aa15.12■□□□□ 0.01
PABPC4-218ENST00000513632 PLEKHD1A6NEE1 506 aa15.12■□□□□ 0.01
PABPC4-218ENST00000513632 ARAP3Q8WWN8 1544 aa15.08■□□□□ 0.01
PABPC4-218ENST00000513632 RAPGEF3O95398 923 aa15.08■□□□□ 0
PABPC4-218ENST00000513632 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
PABPC4-218ENST00000513632 FHOD3Q2V2M9 1422 aa15.05■□□□□ -0
PABPC4-218ENST00000513632 SAMD9Q5K651 1589 aa15.05■□□□□ -0
PABPC4-218ENST00000513632 NEO1Q92859 1461 aa15.04■□□□□ -0
PABPC4-218ENST00000513632 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
PABPC4-218ENST00000513632 RAPGEF6Q8TEU7 1601 aa15.03■□□□□ -0
PABPC4-218ENST00000513632 UBTFP17480 764 aaKnown RBP15.03■□□□□ -0
PABPC4-218ENST00000513632 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
PABPC4-218ENST00000513632 ATP1B4Q9UN42 357 aaPredicted RBP15.01□□□□□ -0.01
PABPC4-218ENST00000513632 ABCA9Q8IUA7 1624 aa15.01□□□□□ -0.01
PABPC4-218ENST00000513632 EHMT2Q96KQ7 1210 aa14.99□□□□□ -0.01
PABPC4-218ENST00000513632 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
PABPC4-218ENST00000513632 CDK11AQ9UQ88 783 aaPredicted RBP14.97□□□□□ -0.01
PABPC4-218ENST00000513632 DENND4BO75064 1496 aaPredicted RBP14.96□□□□□ -0.01
PABPC4-218ENST00000513632 AKNAQ7Z591 1439 aa14.96□□□□□ -0.01
PABPC4-218ENST00000513632 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
PABPC4-218ENST00000513632 FANCAO15360 1455 aa14.94□□□□□ -0.02
PABPC4-218ENST00000513632 KIF21BO75037 1637 aa14.93□□□□□ -0.02
PABPC4-218ENST00000513632 PTPRMP28827 1452 aa14.92□□□□□ -0.02
PABPC4-218ENST00000513632 FMN1Q68DA7 1419 aa14.92□□□□□ -0.02
PABPC4-218ENST00000513632 EFCAB2Q5VUJ9 269 aa14.91□□□□□ -0.02
PABPC4-218ENST00000513632 POGZQ7Z3K3 1410 aa14.9□□□□□ -0.02
PABPC4-218ENST00000513632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.88□□□□□ -0.03
PABPC4-218ENST00000513632 PLCH2O75038 1416 aa14.87□□□□□ -0.03
PABPC4-218ENST00000513632 SCAPERQ9BY12 1400 aa14.87□□□□□ -0.03
PABPC4-218ENST00000513632 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
PABPC4-218ENST00000513632 MAGI2Q86UL8 1455 aa14.86□□□□□ -0.03
PABPC4-218ENST00000513632 CFAP74Q9C0B2 1584 aa14.85□□□□□ -0.03
PABPC4-218ENST00000513632 MLECQ14165 292 aa14.85□□□□□ -0.03
PABPC4-218ENST00000513632 MYT1LQ9UL68 1186 aa14.85□□□□□ -0.03
PABPC4-218ENST00000513632 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
PABPC4-218ENST00000513632 FRMPD1Q5SYB0 1578 aa14.84□□□□□ -0.03
PABPC4-218ENST00000513632 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
PABPC4-218ENST00000513632 CLIP1P30622 1438 aa14.83□□□□□ -0.04
PABPC4-218ENST00000513632 FBXO41Q8TF61 875 aa14.82□□□□□ -0.04
PABPC4-218ENST00000513632 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
PABPC4-218ENST00000513632 ARHGEF40Q8TER5 1519 aa14.82□□□□□ -0.04
PABPC4-218ENST00000513632 YEATS2Q9ULM3 1422 aa14.81□□□□□ -0.04
PABPC4-218ENST00000513632 ZFYVE16Q7Z3T8 1539 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms