RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 IGF1RP08069 1367 aa44.22■■■■■ 4.67
CLDND1-226ENST00000513287 CUL7Q14999 1698 aa44.14■■■■■ 4.66
CLDND1-226ENST00000513287 KIAA0586Q9BVV6 1533 aa44.1■■■■■ 4.65
CLDND1-226ENST00000513287 CARMIL1Q5VZK9 1371 aa43.9■■■■■ 4.62
CLDND1-226ENST00000513287 KIF13AQ9H1H9 1805 aa43.89■■■■■ 4.62
CLDND1-226ENST00000513287 NPM1P06748 294 aaKnown RBP eCLIP43.84■■■■■ 4.61
CLDND1-226ENST00000513287 MAPKBP1O60336 1514 aa43.83■■■■■ 4.61
CLDND1-226ENST00000513287 ADCY10Q96PN6 1610 aa43.77■■■■■ 4.6
CLDND1-226ENST00000513287 ABCC10Q5T3U5 1492 aa43.76■■■■■ 4.6
CLDND1-226ENST00000513287 CARMIL2Q6F5E8 1435 aa43.65■■■■■ 4.58
CLDND1-226ENST00000513287 FAM69CQ0P6D2 419 aa43.64■■■■■ 4.58
CLDND1-226ENST00000513287 PTPRGP23470 1445 aa43.64■■■■■ 4.58
CLDND1-226ENST00000513287 IQGAP2Q13576 1575 aa43.6■■■■■ 4.57
CLDND1-226ENST00000513287 DIP2BQ9P265 1576 aa43.59■■■■■ 4.57
CLDND1-226ENST00000513287 TNIKQ9UKE5 1360 aa43.59■■■■■ 4.57
CLDND1-226ENST00000513287 AEBP2Q6ZN18 517 aaPredicted RBP43.56■■■■■ 4.56
CLDND1-226ENST00000513287 RAPGEF2Q9Y4G8 1499 aa43.51■■■■■ 4.56
CLDND1-226ENST00000513287 ABCC2Q92887 1545 aa43.43■■■■■ 4.54
CLDND1-226ENST00000513287 UHRF1BP1LA0JNW5 1464 aa43.42■■■■■ 4.54
CLDND1-226ENST00000513287 DISP1Q96F81 1524 aa43.41■■■■■ 4.54
CLDND1-226ENST00000513287 UGGT2Q9NYU1 1516 aa43.39■■■■■ 4.54
CLDND1-226ENST00000513287 UACAQ9BZF9 1416 aa43.32■■■■■ 4.53
CLDND1-226ENST00000513287 PLB1Q6P1J6 1458 aa43.29■■■■■ 4.52
CLDND1-226ENST00000513287 TTBK1Q5TCY1 1321 aaPredicted RBP43.24■■■■■ 4.51
CLDND1-226ENST00000513287 ASXL2Q76L83 1435 aa43.22■■■■■ 4.51
CLDND1-226ENST00000513287 GLI2P10070 1586 aa43.22■■■■■ 4.51
CLDND1-226ENST00000513287 KDM6BO15054 1643 aa43.19■■■■■ 4.51
CLDND1-226ENST00000513287 KIAA0556O60303 1618 aa43.19■■■■■ 4.51
CLDND1-226ENST00000513287 KDM5BQ9UGL1 1544 aa43.19■■■■■ 4.5
CLDND1-226ENST00000513287 TSPOAP1O95153 1857 aa43.18■■■■■ 4.5
CLDND1-226ENST00000513287 CTTNBP2Q8WZ74 1663 aa43.11■■■■■ 4.49
CLDND1-226ENST00000513287 PRXQ9BXM0 1461 aa43.1■■■■■ 4.49
CLDND1-226ENST00000513287 GOLGA3Q08378 1498 aa43.05■■■■■ 4.48
CLDND1-226ENST00000513287 PPRC1Q5VV67 1664 aaKnown RBP43■■■■■ 4.47
CLDND1-226ENST00000513287 EPRSP07814 1512 aaKnown RBP43■■■■■ 4.47
CLDND1-226ENST00000513287 ZCCHC11Q5TAX3 1644 aaKnown RBP42.99■■■■■ 4.47
CLDND1-226ENST00000513287 MAP3K4Q9Y6R4 1608 aa42.92■■■■■ 4.46
CLDND1-226ENST00000513287 ABCA8O94911 1581 aa42.85■■■■■ 4.45
CLDND1-226ENST00000513287 TEX14Q8IWB6 1497 aa42.83■■■■■ 4.45
CLDND1-226ENST00000513287 WDR7Q9Y4E6 1490 aa42.83■■■■■ 4.45
CLDND1-226ENST00000513287 KDM4FA0A1W2PPD8 638 aa42.78■■■■■ 4.44
CLDND1-226ENST00000513287 CSRNP3Q8WYN3 585 aa42.73■■■■■ 4.43
CLDND1-226ENST00000513287 COL17A1Q9UMD9 1497 aaPredicted RBP42.7■■■■■ 4.43
CLDND1-226ENST00000513287 FAM9AQ8IZU1 332 aaPredicted RBP42.69■■■■■ 4.42
CLDND1-226ENST00000513287 EEA1Q15075 1411 aa42.64■■■■■ 4.42
CLDND1-226ENST00000513287 MAGI3Q5TCQ9 1506 aa42.62■■■■■ 4.41
CLDND1-226ENST00000513287 CFAP43Q8NDM7 1665 aa42.62■■■■■ 4.41
CLDND1-226ENST00000513287 CD109Q6YHK3 1445 aa42.57■■■■■ 4.41
CLDND1-226ENST00000513287 SAMD9Q5K651 1589 aa42.54■■■■■ 4.4
CLDND1-226ENST00000513287 KCNH8Q96L42 1107 aa42.5■■■■■ 4.39
CLDND1-226ENST00000513287 ATP10BO94823 1461 aa42.49■■■■■ 4.39
CLDND1-226ENST00000513287 P3H3Q8IVL6 736 aa42.44■■■■■ 4.38
CLDND1-226ENST00000513287 ADGRL1O94910 1474 aa42.4■■■■■ 4.38
CLDND1-226ENST00000513287 RAPGEF6Q8TEU7 1601 aa42.35■■■■■ 4.37
CLDND1-226ENST00000513287 PHLDB1Q86UU1 1377 aa42.3■■■■■ 4.36
CLDND1-226ENST00000513287 ARAP3Q8WWN8 1544 aa42.3■■■■■ 4.36
CLDND1-226ENST00000513287 ABCA9Q8IUA7 1624 aa42.29■■■■■ 4.36
CLDND1-226ENST00000513287 KIF21BO75037 1637 aa42.22■■■■■ 4.35
CLDND1-226ENST00000513287 ARID3CA6NKF2 412 aa42.21■■■■■ 4.35
CLDND1-226ENST00000513287 NUP153P49790 1475 aaKnown RBP42.19■■■■■ 4.34
CLDND1-226ENST00000513287 EFCAB5A4FU69 1503 aa42.15■■■■■ 4.34
CLDND1-226ENST00000513287 FHOD3Q2V2M9 1422 aa42.13■■■■■ 4.34
CLDND1-226ENST00000513287 NEO1Q92859 1461 aa42.11■■■■■ 4.33
CLDND1-226ENST00000513287 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.08■■■■■ 4.33
CLDND1-226ENST00000513287 HNRNPUL2Q1KMD3 747 aaKnown RBP42.08■■■■■ 4.33
CLDND1-226ENST00000513287 PLEKHD1A6NEE1 506 aa42.02■■■■■ 4.32
CLDND1-226ENST00000513287 RANGAP1P46060 587 aaPredicted RBP42.01■■■■■ 4.32
CLDND1-226ENST00000513287 RAPGEF3O95398 923 aa41.88■■■■■ 4.29
CLDND1-226ENST00000513287 CHIC1Q5VXU3 224 aa41.86■■■■■ 4.29
CLDND1-226ENST00000513287 FRMPD1Q5SYB0 1578 aa41.82■■■■■ 4.29
CLDND1-226ENST00000513287 HECW2Q9P2P5 1572 aa41.81■■■■■ 4.28
CLDND1-226ENST00000513287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.81■■■■■ 4.28
CLDND1-226ENST00000513287 UBTFP17480 764 aaKnown RBP41.8■■■■■ 4.28
CLDND1-226ENST00000513287 CFAP74Q9C0B2 1584 aa41.79■■■■■ 4.28
CLDND1-226ENST00000513287 FMN1Q68DA7 1419 aa41.78■■■■■ 4.28
CLDND1-226ENST00000513287 AKNAQ7Z591 1439 aa41.76■■■■■ 4.28
CLDND1-226ENST00000513287 FANCAO15360 1455 aa41.75■■■■■ 4.27
CLDND1-226ENST00000513287 DENND4BO75064 1496 aaPredicted RBP41.74■■■■■ 4.27
CLDND1-226ENST00000513287 ADAMTSL3P82987 1691 aa41.74■■■■■ 4.27
CLDND1-226ENST00000513287 RICTORQ6R327 1708 aa41.71■■■■■ 4.27
CLDND1-226ENST00000513287 ARHGAP35Q9NRY4 1499 aa41.7■■■■■ 4.27
CLDND1-226ENST00000513287 CDK13Q14004 1512 aaKnown RBP41.69■■■■■ 4.26
CLDND1-226ENST00000513287 TTC37Q6PGP7 1564 aa41.68■■■■■ 4.26
CLDND1-226ENST00000513287 HECW1Q76N89 1606 aa41.66■■■■■ 4.26
CLDND1-226ENST00000513287 PLCH2O75038 1416 aa41.62■■■■■ 4.25
CLDND1-226ENST00000513287 BCORL1Q5H9F3 1711 aa41.62■■■■■ 4.25
CLDND1-226ENST00000513287 ARHGEF40Q8TER5 1519 aa41.62■■■■■ 4.25
CLDND1-226ENST00000513287 PTPRMP28827 1452 aa41.61■■■■■ 4.25
CLDND1-226ENST00000513287 CDK11AQ9UQ88 783 aaPredicted RBP41.61■■■■■ 4.25
CLDND1-226ENST00000513287 ZMYM4Q5VZL5 1548 aa41.6■■■■■ 4.25
CLDND1-226ENST00000513287 MAGI2Q86UL8 1455 aa41.57■■■■■ 4.25
CLDND1-226ENST00000513287 ARID4BQ4LE39 1312 aaPredicted RBP41.51■■■■■ 4.24
CLDND1-226ENST00000513287 EHMT2Q96KQ7 1210 aa41.51■■■■■ 4.24
CLDND1-226ENST00000513287 ATP1B4Q9UN42 357 aaPredicted RBP41.47■■■■■ 4.23
CLDND1-226ENST00000513287 SCAPERQ9BY12 1400 aa41.44■■■■■ 4.23
CLDND1-226ENST00000513287 ZFYVE16Q7Z3T8 1539 aa41.44■■■■■ 4.23
CLDND1-226ENST00000513287 MADDQ8WXG6 1647 aa41.44■■■■■ 4.22
CLDND1-226ENST00000513287 EFCAB2Q5VUJ9 269 aa41.44■■■■■ 4.22
CLDND1-226ENST00000513287 MYO5CQ9NQX4 1742 aa41.44■■■■■ 4.22
CLDND1-226ENST00000513287 TROQ12816 1431 aaPredicted RBP41.44■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms