RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
SNHG4-207ENST00000513259 NUP160Q12769 1436 aa16.09■□□□□ 0.17
SNHG4-207ENST00000513259 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
SNHG4-207ENST00000513259 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.16
SNHG4-207ENST00000513259 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
SNHG4-207ENST00000513259 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
SNHG4-207ENST00000513259 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
SNHG4-207ENST00000513259 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
SNHG4-207ENST00000513259 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
SNHG4-207ENST00000513259 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
SNHG4-207ENST00000513259 KIF13AQ9H1H9 1805 aa16.01■□□□□ 0.15
SNHG4-207ENST00000513259 PRG4Q92954 1404 aaPredicted RBP15.98■□□□□ 0.15
SNHG4-207ENST00000513259 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SNHG4-207ENST00000513259 JPH4Q96JJ6 628 aa15.97■□□□□ 0.15
SNHG4-207ENST00000513259 FAM69CQ0P6D2 419 aa15.9■□□□□ 0.14
SNHG4-207ENST00000513259 NPM1P06748 294 aaKnown RBP eCLIP15.88■□□□□ 0.13
SNHG4-207ENST00000513259 ABCC10Q5T3U5 1492 aa15.87■□□□□ 0.13
SNHG4-207ENST00000513259 RUSC2Q8N2Y8 1516 aa15.87■□□□□ 0.13
SNHG4-207ENST00000513259 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.13
SNHG4-207ENST00000513259 MAPKBP1O60336 1514 aa15.83■□□□□ 0.12
SNHG4-207ENST00000513259 DIP2BQ9P265 1576 aa15.83■□□□□ 0.12
SNHG4-207ENST00000513259 TSPOAP1O95153 1857 aa15.78■□□□□ 0.12
SNHG4-207ENST00000513259 KDM4FA0A1W2PPD8 638 aa15.77■□□□□ 0.12
SNHG4-207ENST00000513259 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
SNHG4-207ENST00000513259 KIAA0586Q9BVV6 1533 aa15.77■□□□□ 0.11
SNHG4-207ENST00000513259 KDM6BO15054 1643 aa15.76■□□□□ 0.11
SNHG4-207ENST00000513259 IGF1RP08069 1367 aa15.75■□□□□ 0.11
SNHG4-207ENST00000513259 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
SNHG4-207ENST00000513259 CUL7Q14999 1698 aa15.7■□□□□ 0.1
SNHG4-207ENST00000513259 PTPRGP23470 1445 aa15.69■□□□□ 0.1
SNHG4-207ENST00000513259 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
SNHG4-207ENST00000513259 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
SNHG4-207ENST00000513259 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
SNHG4-207ENST00000513259 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
SNHG4-207ENST00000513259 ABCC2Q92887 1545 aa15.62■□□□□ 0.09
SNHG4-207ENST00000513259 CARMIL2Q6F5E8 1435 aa15.61■□□□□ 0.09
SNHG4-207ENST00000513259 ASXL2Q76L83 1435 aa15.61■□□□□ 0.09
SNHG4-207ENST00000513259 PPRC1Q5VV67 1664 aaKnown RBP15.61■□□□□ 0.09
SNHG4-207ENST00000513259 GLI2P10070 1586 aa15.59■□□□□ 0.09
SNHG4-207ENST00000513259 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
SNHG4-207ENST00000513259 IQGAP2Q13576 1575 aa15.57■□□□□ 0.08
SNHG4-207ENST00000513259 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
SNHG4-207ENST00000513259 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
SNHG4-207ENST00000513259 UHRF1BP1LA0JNW5 1464 aa15.56■□□□□ 0.08
SNHG4-207ENST00000513259 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
SNHG4-207ENST00000513259 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
SNHG4-207ENST00000513259 DISP1Q96F81 1524 aa15.54■□□□□ 0.08
SNHG4-207ENST00000513259 ADGRL1O94910 1474 aa15.54■□□□□ 0.08
SNHG4-207ENST00000513259 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
SNHG4-207ENST00000513259 EPRSP07814 1512 aaKnown RBP15.51■□□□□ 0.07
SNHG4-207ENST00000513259 MAP3K4Q9Y6R4 1608 aa15.5■□□□□ 0.07
SNHG4-207ENST00000513259 KDM5BQ9UGL1 1544 aa15.5■□□□□ 0.07
SNHG4-207ENST00000513259 ZCCHC11Q5TAX3 1644 aaKnown RBP15.49■□□□□ 0.07
SNHG4-207ENST00000513259 UGGT2Q9NYU1 1516 aa15.47■□□□□ 0.07
SNHG4-207ENST00000513259 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.06
SNHG4-207ENST00000513259 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
SNHG4-207ENST00000513259 KIAA0556O60303 1618 aa15.43■□□□□ 0.06
SNHG4-207ENST00000513259 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
SNHG4-207ENST00000513259 WDR7Q9Y4E6 1490 aa15.4■□□□□ 0.06
SNHG4-207ENST00000513259 KCNH8Q96L42 1107 aa15.38■□□□□ 0.05
SNHG4-207ENST00000513259 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
SNHG4-207ENST00000513259 CD109Q6YHK3 1445 aa15.36■□□□□ 0.05
SNHG4-207ENST00000513259 CTTNBP2Q8WZ74 1663 aa15.35■□□□□ 0.05
SNHG4-207ENST00000513259 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
SNHG4-207ENST00000513259 MAGI3Q5TCQ9 1506 aa15.33■□□□□ 0.05
SNHG4-207ENST00000513259 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
SNHG4-207ENST00000513259 ABCA8O94911 1581 aa15.32■□□□□ 0.04
SNHG4-207ENST00000513259 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
SNHG4-207ENST00000513259 KIF21BO75037 1637 aa15.28■□□□□ 0.04
SNHG4-207ENST00000513259 KCNA4P22459 653 aa15.28■□□□□ 0.04
SNHG4-207ENST00000513259 ARID3CA6NKF2 412 aa15.27■□□□□ 0.04
SNHG4-207ENST00000513259 P3H3Q8IVL6 736 aa15.24■□□□□ 0.03
SNHG4-207ENST00000513259 ARAP3Q8WWN8 1544 aa15.23■□□□□ 0.03
SNHG4-207ENST00000513259 ATP10BO94823 1461 aa15.22■□□□□ 0.03
SNHG4-207ENST00000513259 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
SNHG4-207ENST00000513259 RAPGEF3O95398 923 aa15.18■□□□□ 0.02
SNHG4-207ENST00000513259 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
SNHG4-207ENST00000513259 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
SNHG4-207ENST00000513259 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
SNHG4-207ENST00000513259 PTPRMP28827 1452 aa15.16■□□□□ 0.02
SNHG4-207ENST00000513259 FBXO41Q8TF61 875 aa15.16■□□□□ 0.02
SNHG4-207ENST00000513259 PHLDB1Q86UU1 1377 aa15.15■□□□□ 0.02
SNHG4-207ENST00000513259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
SNHG4-207ENST00000513259 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
SNHG4-207ENST00000513259 NEO1Q92859 1461 aa15.11■□□□□ 0.01
SNHG4-207ENST00000513259 BCORL1Q5H9F3 1711 aa15.11■□□□□ 0.01
SNHG4-207ENST00000513259 ARID4BQ4LE39 1312 aaPredicted RBP15.11■□□□□ 0.01
SNHG4-207ENST00000513259 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
SNHG4-207ENST00000513259 SAMD9Q5K651 1589 aa15.1■□□□□ 0.01
SNHG4-207ENST00000513259 FRMPD1Q5SYB0 1578 aa15.1■□□□□ 0.01
SNHG4-207ENST00000513259 MADDQ8WXG6 1647 aa15.09■□□□□ 0.01
SNHG4-207ENST00000513259 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
SNHG4-207ENST00000513259 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
SNHG4-207ENST00000513259 NUP153P49790 1475 aaKnown RBP15.05■□□□□ -0
SNHG4-207ENST00000513259 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
SNHG4-207ENST00000513259 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
SNHG4-207ENST00000513259 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
SNHG4-207ENST00000513259 DENND4BO75064 1496 aaPredicted RBP15.02■□□□□ -0
SNHG4-207ENST00000513259 RICTORQ6R327 1708 aa15.02□□□□□ -0.01
SNHG4-207ENST00000513259 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms