RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
VEGFA-216ENST00000512683 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
VEGFA-216ENST00000512683 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
VEGFA-216ENST00000512683 FAM69CQ0P6D2 419 aa21.85■■□□□ 1.09
VEGFA-216ENST00000512683 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
VEGFA-216ENST00000512683 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
VEGFA-216ENST00000512683 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
VEGFA-216ENST00000512683 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
VEGFA-216ENST00000512683 CUL7Q14999 1698 aa21.77■■□□□ 1.08
VEGFA-216ENST00000512683 PTPRGP23470 1445 aa21.77■■□□□ 1.08
VEGFA-216ENST00000512683 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
VEGFA-216ENST00000512683 TNIKQ9UKE5 1360 aa21.73■■□□□ 1.07
VEGFA-216ENST00000512683 ADCY10Q96PN6 1610 aa21.65■■□□□ 1.06
VEGFA-216ENST00000512683 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
VEGFA-216ENST00000512683 DIP2BQ9P265 1576 aa21.6■■□□□ 1.05
VEGFA-216ENST00000512683 ABCC2Q92887 1545 aa21.6■■□□□ 1.05
VEGFA-216ENST00000512683 UHRF1BP1LA0JNW5 1464 aa21.58■■□□□ 1.05
VEGFA-216ENST00000512683 PLB1Q6P1J6 1458 aa21.58■■□□□ 1.05
VEGFA-216ENST00000512683 RAPGEF2Q9Y4G8 1499 aa21.58■■□□□ 1.05
VEGFA-216ENST00000512683 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
VEGFA-216ENST00000512683 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-216ENST00000512683 IQGAP2Q13576 1575 aa21.56■■□□□ 1.04
VEGFA-216ENST00000512683 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
VEGFA-216ENST00000512683 DISP1Q96F81 1524 aa21.51■■□□□ 1.03
VEGFA-216ENST00000512683 UGGT2Q9NYU1 1516 aa21.5■■□□□ 1.03
VEGFA-216ENST00000512683 GLI2P10070 1586 aa21.46■■□□□ 1.03
VEGFA-216ENST00000512683 KDM5BQ9UGL1 1544 aa21.45■■□□□ 1.02
VEGFA-216ENST00000512683 KDM6BO15054 1643 aa21.44■■□□□ 1.02
VEGFA-216ENST00000512683 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
VEGFA-216ENST00000512683 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
VEGFA-216ENST00000512683 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
VEGFA-216ENST00000512683 EPRSP07814 1512 aaKnown RBP21.38■■□□□ 1.01
VEGFA-216ENST00000512683 TEX14Q8IWB6 1497 aa21.35■■□□□ 1.01
VEGFA-216ENST00000512683 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
VEGFA-216ENST00000512683 KIAA0556O60303 1618 aa21.33■■□□□ 1
VEGFA-216ENST00000512683 WDR7Q9Y4E6 1490 aa21.28■■□□□ 1
VEGFA-216ENST00000512683 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
VEGFA-216ENST00000512683 TSPOAP1O95153 1857 aa21.26■□□□□ 0.99
VEGFA-216ENST00000512683 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
VEGFA-216ENST00000512683 CD109Q6YHK3 1445 aa21.23■□□□□ 0.99
VEGFA-216ENST00000512683 KCNH8Q96L42 1107 aa21.23■□□□□ 0.99
VEGFA-216ENST00000512683 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
VEGFA-216ENST00000512683 MAGI3Q5TCQ9 1506 aa21.21■□□□□ 0.99
VEGFA-216ENST00000512683 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
VEGFA-216ENST00000512683 ABCA8O94911 1581 aa21.2■□□□□ 0.98
VEGFA-216ENST00000512683 PPRC1Q5VV67 1664 aaKnown RBP21.2■□□□□ 0.98
VEGFA-216ENST00000512683 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
VEGFA-216ENST00000512683 EEA1Q15075 1411 aa21.14■□□□□ 0.98
VEGFA-216ENST00000512683 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
VEGFA-216ENST00000512683 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
VEGFA-216ENST00000512683 ADGRL1O94910 1474 aa21.12■□□□□ 0.97
VEGFA-216ENST00000512683 ATP10BO94823 1461 aa21.11■□□□□ 0.97
VEGFA-216ENST00000512683 CFAP43Q8NDM7 1665 aa21.05■□□□□ 0.96
VEGFA-216ENST00000512683 ARAP3Q8WWN8 1544 aa21.04■□□□□ 0.96
VEGFA-216ENST00000512683 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
VEGFA-216ENST00000512683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-216ENST00000512683 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
VEGFA-216ENST00000512683 PLEKHD1A6NEE1 506 aa21■□□□□ 0.95
VEGFA-216ENST00000512683 SAMD9Q5K651 1589 aa20.97■□□□□ 0.95
VEGFA-216ENST00000512683 NEO1Q92859 1461 aa20.95■□□□□ 0.94
VEGFA-216ENST00000512683 RAPGEF3O95398 923 aa20.91■□□□□ 0.94
VEGFA-216ENST00000512683 ABCA9Q8IUA7 1624 aa20.91■□□□□ 0.94
VEGFA-216ENST00000512683 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
VEGFA-216ENST00000512683 RAPGEF6Q8TEU7 1601 aa20.89■□□□□ 0.94
VEGFA-216ENST00000512683 RANGAP1P46060 587 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-216ENST00000512683 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
VEGFA-216ENST00000512683 ILDR1Q86SU0 546 aaPredicted RBP20.84■□□□□ 0.93
VEGFA-216ENST00000512683 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.93
VEGFA-216ENST00000512683 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
VEGFA-216ENST00000512683 CDK11AQ9UQ88 783 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-216ENST00000512683 DENND4BO75064 1496 aaPredicted RBP20.8■□□□□ 0.92
VEGFA-216ENST00000512683 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
VEGFA-216ENST00000512683 HECW2Q9P2P5 1572 aa20.79■□□□□ 0.92
VEGFA-216ENST00000512683 ARID4BQ4LE39 1312 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-216ENST00000512683 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
VEGFA-216ENST00000512683 KIF21BO75037 1637 aa20.77■□□□□ 0.92
VEGFA-216ENST00000512683 FMN1Q68DA7 1419 aa20.75■□□□□ 0.91
VEGFA-216ENST00000512683 FANCAO15360 1455 aa20.75■□□□□ 0.91
VEGFA-216ENST00000512683 PTPRMP28827 1452 aa20.74■□□□□ 0.91
VEGFA-216ENST00000512683 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
VEGFA-216ENST00000512683 PLCH2O75038 1416 aa20.71■□□□□ 0.91
VEGFA-216ENST00000512683 EFCAB2Q5VUJ9 269 aa20.71■□□□□ 0.91
VEGFA-216ENST00000512683 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
VEGFA-216ENST00000512683 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.92e-6■■□□□ 14
VEGFA-216ENST00000512683 ADAMTSL3P82987 1691 aa20.67■□□□□ 0.9
VEGFA-216ENST00000512683 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
VEGFA-216ENST00000512683 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
VEGFA-216ENST00000512683 FRMPD1Q5SYB0 1578 aa20.65■□□□□ 0.9
VEGFA-216ENST00000512683 SCAPERQ9BY12 1400 aa20.64■□□□□ 0.89
VEGFA-216ENST00000512683 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
VEGFA-216ENST00000512683 ARHGAP35Q9NRY4 1499 aa20.61■□□□□ 0.89
VEGFA-216ENST00000512683 ARHGEF40Q8TER5 1519 aa20.6■□□□□ 0.89
VEGFA-216ENST00000512683 CDK13Q14004 1512 aaKnown RBP20.59■□□□□ 0.89
VEGFA-216ENST00000512683 FBXO41Q8TF61 875 aa20.59■□□□□ 0.89
VEGFA-216ENST00000512683 BCORL1Q5H9F3 1711 aa20.58■□□□□ 0.89
VEGFA-216ENST00000512683 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.88
VEGFA-216ENST00000512683 CLIP1P30622 1438 aa20.57■□□□□ 0.88
VEGFA-216ENST00000512683 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
VEGFA-216ENST00000512683 ZFYVE16Q7Z3T8 1539 aa20.57■□□□□ 0.88
VEGFA-216ENST00000512683 YEATS2Q9ULM3 1422 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms