RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CUL7Q14999 1698 aa25.68■■□□□ 1.7
CCHCR1-229ENST00000512418 IGF1RP08069 1367 aa25.67■■□□□ 1.7
CCHCR1-229ENST00000512418 KIAA0586Q9BVV6 1533 aa25.59■■□□□ 1.69
CCHCR1-229ENST00000512418 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
CCHCR1-229ENST00000512418 KIF13AQ9H1H9 1805 aa25.44■■□□□ 1.66
CCHCR1-229ENST00000512418 ADCY10Q96PN6 1610 aa25.42■■□□□ 1.66
CCHCR1-229ENST00000512418 NPM1P06748 294 aaKnown RBP eCLIP25.4■■□□□ 1.66
CCHCR1-229ENST00000512418 MAPKBP1O60336 1514 aa25.4■■□□□ 1.66
CCHCR1-229ENST00000512418 IQGAP2Q13576 1575 aa25.36■■□□□ 1.65
CCHCR1-229ENST00000512418 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
CCHCR1-229ENST00000512418 CARMIL2Q6F5E8 1435 aa25.34■■□□□ 1.65
CCHCR1-229ENST00000512418 PTPRGP23470 1445 aa25.32■■□□□ 1.64
CCHCR1-229ENST00000512418 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
CCHCR1-229ENST00000512418 DIP2BQ9P265 1576 aa25.3■■□□□ 1.64
CCHCR1-229ENST00000512418 FAM69CQ0P6D2 419 aa25.29■■□□□ 1.64
CCHCR1-229ENST00000512418 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
CCHCR1-229ENST00000512418 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
CCHCR1-229ENST00000512418 TTBK1Q5TCY1 1321 aaPredicted RBP25.21■■□□□ 1.63
CCHCR1-229ENST00000512418 UGGT2Q9NYU1 1516 aa25.21■■□□□ 1.63
CCHCR1-229ENST00000512418 ABCC2Q92887 1545 aa25.2■■□□□ 1.62
CCHCR1-229ENST00000512418 AEBP2Q6ZN18 517 aaPredicted RBP25.17■■□□□ 1.62
CCHCR1-229ENST00000512418 UHRF1BP1LA0JNW5 1464 aa25.16■■□□□ 1.62
CCHCR1-229ENST00000512418 UACAQ9BZF9 1416 aa25.14■■□□□ 1.62
CCHCR1-229ENST00000512418 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
CCHCR1-229ENST00000512418 CTTNBP2Q8WZ74 1663 aa25.1■■□□□ 1.61
CCHCR1-229ENST00000512418 PLB1Q6P1J6 1458 aa25.09■■□□□ 1.61
CCHCR1-229ENST00000512418 ASXL2Q76L83 1435 aa25.09■■□□□ 1.61
CCHCR1-229ENST00000512418 TSPOAP1O95153 1857 aa25.07■■□□□ 1.6
CCHCR1-229ENST00000512418 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
CCHCR1-229ENST00000512418 KDM6BO15054 1643 aa25.05■■□□□ 1.6
CCHCR1-229ENST00000512418 KDM5BQ9UGL1 1544 aa25.05■■□□□ 1.6
CCHCR1-229ENST00000512418 GLI2P10070 1586 aa25.03■■□□□ 1.6
CCHCR1-229ENST00000512418 GOLGA3Q08378 1498 aa25.01■■□□□ 1.59
CCHCR1-229ENST00000512418 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
CCHCR1-229ENST00000512418 EPRSP07814 1512 aaKnown RBP24.94■■□□□ 1.58
CCHCR1-229ENST00000512418 PPRC1Q5VV67 1664 aaKnown RBP24.94■■□□□ 1.58
CCHCR1-229ENST00000512418 MAP3K4Q9Y6R4 1608 aa24.9■■□□□ 1.58
CCHCR1-229ENST00000512418 ABCA8O94911 1581 aa24.88■■□□□ 1.57
CCHCR1-229ENST00000512418 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
CCHCR1-229ENST00000512418 CSRNP3Q8WYN3 585 aa24.85■■□□□ 1.57
CCHCR1-229ENST00000512418 TEX14Q8IWB6 1497 aa24.83■■□□□ 1.57
CCHCR1-229ENST00000512418 EEA1Q15075 1411 aa24.82■■□□□ 1.56
CCHCR1-229ENST00000512418 FAM9AQ8IZU1 332 aaPredicted RBP24.76■■□□□ 1.55
CCHCR1-229ENST00000512418 SAMD9Q5K651 1589 aa24.76■■□□□ 1.55
CCHCR1-229ENST00000512418 COL17A1Q9UMD9 1497 aaPredicted RBP24.75■■□□□ 1.55
CCHCR1-229ENST00000512418 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
CCHCR1-229ENST00000512418 KDM4FA0A1W2PPD8 638 aa24.72■■□□□ 1.55
CCHCR1-229ENST00000512418 P3H3Q8IVL6 736 aa24.72■■□□□ 1.55
CCHCR1-229ENST00000512418 MAGI3Q5TCQ9 1506 aa24.7■■□□□ 1.54
CCHCR1-229ENST00000512418 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
CCHCR1-229ENST00000512418 KCNH8Q96L42 1107 aa24.68■■□□□ 1.54
CCHCR1-229ENST00000512418 ATP10BO94823 1461 aa24.66■■□□□ 1.54
CCHCR1-229ENST00000512418 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
CCHCR1-229ENST00000512418 ARID3CA6NKF2 412 aa24.62■■□□□ 1.53
CCHCR1-229ENST00000512418 KIF21BO75037 1637 aa24.61■■□□□ 1.53
CCHCR1-229ENST00000512418 ADGRL1O94910 1474 aa24.58■■□□□ 1.53
CCHCR1-229ENST00000512418 FHOD3Q2V2M9 1422 aa24.56■■□□□ 1.52
CCHCR1-229ENST00000512418 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
CCHCR1-229ENST00000512418 RANGAP1P46060 587 aaPredicted RBP24.55■■□□□ 1.52
CCHCR1-229ENST00000512418 NUP153P49790 1475 aaKnown RBP24.54■■□□□ 1.52
CCHCR1-229ENST00000512418 EFCAB5A4FU69 1503 aa24.54■■□□□ 1.52
CCHCR1-229ENST00000512418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
CCHCR1-229ENST00000512418 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
CCHCR1-229ENST00000512418 ARAP3Q8WWN8 1544 aa24.5■■□□□ 1.51
CCHCR1-229ENST00000512418 PHLDB1Q86UU1 1377 aa24.46■■□□□ 1.51
CCHCR1-229ENST00000512418 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
CCHCR1-229ENST00000512418 NEO1Q92859 1461 aa24.42■■□□□ 1.5
CCHCR1-229ENST00000512418 PLEKHD1A6NEE1 506 aa24.38■■□□□ 1.49
CCHCR1-229ENST00000512418 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
CCHCR1-229ENST00000512418 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
CCHCR1-229ENST00000512418 RAPGEF3O95398 923 aa24.31■■□□□ 1.48
CCHCR1-229ENST00000512418 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
CCHCR1-229ENST00000512418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.481e-5■■■■□ 25.8
CCHCR1-229ENST00000512418 CDK13Q14004 1512 aaKnown RBP24.3■■□□□ 1.48
CCHCR1-229ENST00000512418 FRMPD1Q5SYB0 1578 aa24.29■■□□□ 1.48
CCHCR1-229ENST00000512418 ARHGAP35Q9NRY4 1499 aa24.29■■□□□ 1.48
CCHCR1-229ENST00000512418 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
CCHCR1-229ENST00000512418 TTC37Q6PGP7 1564 aa24.28■■□□□ 1.48
CCHCR1-229ENST00000512418 HECW1Q76N89 1606 aa24.27■■□□□ 1.48
CCHCR1-229ENST00000512418 FANCAO15360 1455 aa24.26■■□□□ 1.47
CCHCR1-229ENST00000512418 AKNAQ7Z591 1439 aa24.24■■□□□ 1.47
CCHCR1-229ENST00000512418 DENND4BO75064 1496 aaPredicted RBP24.23■■□□□ 1.47
CCHCR1-229ENST00000512418 HECW2Q9P2P5 1572 aa24.23■■□□□ 1.47
CCHCR1-229ENST00000512418 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
CCHCR1-229ENST00000512418 ATP1B4Q9UN42 357 aaPredicted RBP24.19■■□□□ 1.46
CCHCR1-229ENST00000512418 ARHGEF40Q8TER5 1519 aa24.19■■□□□ 1.46
CCHCR1-229ENST00000512418 ADAMTSL3P82987 1691 aa24.18■■□□□ 1.46
CCHCR1-229ENST00000512418 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
CCHCR1-229ENST00000512418 PLCH2O75038 1416 aa24.15■■□□□ 1.46
CCHCR1-229ENST00000512418 ZMYM4Q5VZL5 1548 aa24.15■■□□□ 1.46
CCHCR1-229ENST00000512418 BCORL1Q5H9F3 1711 aa24.14■■□□□ 1.45
CCHCR1-229ENST00000512418 PTPRMP28827 1452 aa24.12■■□□□ 1.45
CCHCR1-229ENST00000512418 KIF14Q15058 1648 aa24.11■■□□□ 1.45
CCHCR1-229ENST00000512418 MYO5CQ9NQX4 1742 aa24.11■■□□□ 1.45
CCHCR1-229ENST00000512418 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
CCHCR1-229ENST00000512418 TROQ12816 1431 aaPredicted RBP24.1■■□□□ 1.45
CCHCR1-229ENST00000512418 MAGI2Q86UL8 1455 aa24.08■■□□□ 1.45
CCHCR1-229ENST00000512418 LRRIQ1Q96JM4 1722 aa24.08■■□□□ 1.45
CCHCR1-229ENST00000512418 ZFYVE16Q7Z3T8 1539 aa24.08■■□□□ 1.45
CCHCR1-229ENST00000512418 CLIP1P30622 1438 aa24.08■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms