RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 COL17A1Q9UMD9 1497 aaPredicted RBP12.55□□□□□ -0.4
CLDND1-225ENST00000512147 WIZO95785 1651 aa12.54□□□□□ -0.4
CLDND1-225ENST00000512147 PTPRMP28827 1452 aa12.52□□□□□ -0.41
CLDND1-225ENST00000512147 HSPA2P54652 639 aa12.51□□□□□ -0.41
CLDND1-225ENST00000512147 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-225ENST00000512147 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
CLDND1-225ENST00000512147 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
CLDND1-225ENST00000512147 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
CLDND1-225ENST00000512147 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
CLDND1-225ENST00000512147 NUP160Q12769 1436 aa12.42□□□□□ -0.42
CLDND1-225ENST00000512147 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
CLDND1-225ENST00000512147 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
CLDND1-225ENST00000512147 PHF23Q9BUL5 403 aaPredicted RBP12.4□□□□□ -0.42
CLDND1-225ENST00000512147 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
CLDND1-225ENST00000512147 GLI2P10070 1586 aa12.38□□□□□ -0.43
CLDND1-225ENST00000512147 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
CLDND1-225ENST00000512147 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
CLDND1-225ENST00000512147 KIF21BO75037 1637 aa12.33□□□□□ -0.43
CLDND1-225ENST00000512147 PLB1Q6P1J6 1458 aa12.33□□□□□ -0.44
CLDND1-225ENST00000512147 ADAMTSL3P82987 1691 aa12.32□□□□□ -0.44
CLDND1-225ENST00000512147 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
CLDND1-225ENST00000512147 ASXL2Q76L83 1435 aa12.3□□□□□ -0.44
CLDND1-225ENST00000512147 TOP2AP11388 1531 aaKnown RBP12.3□□□□□ -0.44
CLDND1-225ENST00000512147 IQSEC2Q5JU85 1478 aa12.27□□□□□ -0.45
CLDND1-225ENST00000512147 UBAP1LF5GYI3 381 aa12.26□□□□□ -0.45
CLDND1-225ENST00000512147 PLPPR3Q6T4P5 718 aa12.26□□□□□ -0.45
CLDND1-225ENST00000512147 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
CLDND1-225ENST00000512147 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
CLDND1-225ENST00000512147 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
CLDND1-225ENST00000512147 KIAA0586Q9BVV6 1533 aa12.23□□□□□ -0.45
CLDND1-225ENST00000512147 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.46
CLDND1-225ENST00000512147 MADDQ8WXG6 1647 aa12.2□□□□□ -0.46
CLDND1-225ENST00000512147 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
CLDND1-225ENST00000512147 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
CLDND1-225ENST00000512147 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
CLDND1-225ENST00000512147 ADAMTS12P58397 1594 aa12.18□□□□□ -0.46
CLDND1-225ENST00000512147 HSPA1LP34931 641 aa12.17□□□□□ -0.46
CLDND1-225ENST00000512147 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
CLDND1-225ENST00000512147 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
CLDND1-225ENST00000512147 TTBK1Q5TCY1 1321 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-225ENST00000512147 PTPRTO14522 1441 aa12.14□□□□□ -0.47
CLDND1-225ENST00000512147 LTBP4Q8N2S1 1624 aa12.14□□□□□ -0.47
CLDND1-225ENST00000512147 PTPRGP23470 1445 aa12.13□□□□□ -0.47
CLDND1-225ENST00000512147 RIMS1Q86UR5 1692 aaKnown RBP12.13□□□□□ -0.47
CLDND1-225ENST00000512147 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
CLDND1-225ENST00000512147 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
CLDND1-225ENST00000512147 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
CLDND1-225ENST00000512147 CFAP43Q8NDM7 1665 aa12.08□□□□□ -0.48
CLDND1-225ENST00000512147 IFFO2Q5TF58 517 aa12.08□□□□□ -0.48
CLDND1-225ENST00000512147 CUX1P39880 1505 aa12.07□□□□□ -0.48
CLDND1-225ENST00000512147 CD109Q6YHK3 1445 aa12.07□□□□□ -0.48
CLDND1-225ENST00000512147 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
CLDND1-225ENST00000512147 CUL7Q14999 1698 aa12.06□□□□□ -0.48
CLDND1-225ENST00000512147 PIP4K2BP78356 416 aa12.05□□□□□ -0.48
CLDND1-225ENST00000512147 RUSC2Q8N2Y8 1516 aa12.03□□□□□ -0.48
CLDND1-225ENST00000512147 RGS17Q9UGC6 210 aaPredicted RBP12.03□□□□□ -0.48
CLDND1-225ENST00000512147 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
CLDND1-225ENST00000512147 UHRF1BP1LA0JNW5 1464 aa12□□□□□ -0.49
CLDND1-225ENST00000512147 TOM1O60784 492 aa11.99□□□□□ -0.49
CLDND1-225ENST00000512147 PREX1Q8TCU6 1659 aa11.98□□□□□ -0.49
CLDND1-225ENST00000512147 POGZQ7Z3K3 1410 aa11.98□□□□□ -0.49
CLDND1-225ENST00000512147 TNIKQ9UKE5 1360 aa11.97□□□□□ -0.49
CLDND1-225ENST00000512147 RAPGEF3O95398 923 aa11.97□□□□□ -0.49
CLDND1-225ENST00000512147 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
CLDND1-225ENST00000512147 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
CLDND1-225ENST00000512147 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.5
CLDND1-225ENST00000512147 UHRF1BP1Q6BDS2 1440 aa11.94□□□□□ -0.5
CLDND1-225ENST00000512147 ERICH3Q5RHP9 1530 aa11.94□□□□□ -0.5
CLDND1-225ENST00000512147 WDR7Q9Y4E6 1490 aa11.94□□□□□ -0.5
CLDND1-225ENST00000512147 ZNF335Q9H4Z2 1342 aaPredicted RBP11.93□□□□□ -0.5
CLDND1-225ENST00000512147 POTEAQ6S8J7 498 aa11.93□□□□□ -0.5
CLDND1-225ENST00000512147 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLDND1-225ENST00000512147 PHLDB1Q86UU1 1377 aa11.92□□□□□ -0.5
CLDND1-225ENST00000512147 MLECQ14165 292 aa11.91□□□□□ -0.5
CLDND1-225ENST00000512147 CARMIL2Q6F5E8 1435 aa11.91□□□□□ -0.5
CLDND1-225ENST00000512147 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-225ENST00000512147 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
CLDND1-225ENST00000512147 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
CLDND1-225ENST00000512147 WRNQ14191 1432 aaPredicted RBP eCLIP11.87□□□□□ -0.51
CLDND1-225ENST00000512147 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
CLDND1-225ENST00000512147 FANCAO15360 1455 aa11.87□□□□□ -0.51
CLDND1-225ENST00000512147 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
CLDND1-225ENST00000512147 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
CLDND1-225ENST00000512147 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
CLDND1-225ENST00000512147 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
CLDND1-225ENST00000512147 NCOA1Q15788 1441 aa11.81□□□□□ -0.52
CLDND1-225ENST00000512147 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
CLDND1-225ENST00000512147 ARHGEF40Q8TER5 1519 aa11.78□□□□□ -0.52
CLDND1-225ENST00000512147 KIAA0556O60303 1618 aa11.76□□□□□ -0.53
CLDND1-225ENST00000512147 FOXD1Q16676 465 aa11.75□□□□□ -0.53
CLDND1-225ENST00000512147 RBM33Q96EV2 1170 aaKnown RBP11.75□□□□□ -0.53
CLDND1-225ENST00000512147 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
CLDND1-225ENST00000512147 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
CLDND1-225ENST00000512147 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
CLDND1-225ENST00000512147 NEO1Q92859 1461 aa11.73□□□□□ -0.53
CLDND1-225ENST00000512147 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
CLDND1-225ENST00000512147 PKD2Q13563 968 aa11.7□□□□□ -0.54
CLDND1-225ENST00000512147 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
CLDND1-225ENST00000512147 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
CLDND1-225ENST00000512147 PPP6R1Q9UPN7 881 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms