RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
CLDND1-225ENST00000512147 ABCC9O60706 1549 aa16.88■□□□□ 0.29
CLDND1-225ENST00000512147 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
CLDND1-225ENST00000512147 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
CLDND1-225ENST00000512147 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLDND1-225ENST00000512147 TRIM41Q8WV44 630 aa15.47■□□□□ 0.07
CLDND1-225ENST00000512147 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
CLDND1-225ENST00000512147 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
CLDND1-225ENST00000512147 CECR2Q9BXF3 1484 aa15.37■□□□□ 0.05
CLDND1-225ENST00000512147 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
CLDND1-225ENST00000512147 CUX2O14529 1486 aa15.11■□□□□ 0.01
CLDND1-225ENST00000512147 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
CLDND1-225ENST00000512147 NACADO15069 1562 aa15□□□□□ -0.01
CLDND1-225ENST00000512147 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
CLDND1-225ENST00000512147 UNC13AQ9UPW8 1703 aa14.96□□□□□ -0.01
CLDND1-225ENST00000512147 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
CLDND1-225ENST00000512147 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
CLDND1-225ENST00000512147 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
CLDND1-225ENST00000512147 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
CLDND1-225ENST00000512147 ILDR1Q86SU0 546 aaPredicted RBP14.6□□□□□ -0.07
CLDND1-225ENST00000512147 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
CLDND1-225ENST00000512147 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
CLDND1-225ENST00000512147 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
CLDND1-225ENST00000512147 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
CLDND1-225ENST00000512147 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
CLDND1-225ENST00000512147 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
CLDND1-225ENST00000512147 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
CLDND1-225ENST00000512147 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
CLDND1-225ENST00000512147 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
CLDND1-225ENST00000512147 NESP48681 1621 aa14.08□□□□□ -0.15
CLDND1-225ENST00000512147 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
CLDND1-225ENST00000512147 SMARCA2P51531 1590 aa13.97□□□□□ -0.17
CLDND1-225ENST00000512147 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
CLDND1-225ENST00000512147 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
CLDND1-225ENST00000512147 PDS5BQ9NTI5 1447 aa13.81□□□□□ -0.2
CLDND1-225ENST00000512147 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
CLDND1-225ENST00000512147 LAMC3Q9Y6N6 1575 aa13.76□□□□□ -0.21
CLDND1-225ENST00000512147 SOCS7O14512 581 aa13.76□□□□□ -0.21
CLDND1-225ENST00000512147 LMTK3Q96Q04 1460 aa13.75□□□□□ -0.21
CLDND1-225ENST00000512147 MRC2Q9UBG0 1479 aa13.72□□□□□ -0.21
CLDND1-225ENST00000512147 FBXO41Q8TF61 875 aa13.71□□□□□ -0.21
CLDND1-225ENST00000512147 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
CLDND1-225ENST00000512147 WDR62O43379 1518 aa13.68□□□□□ -0.22
CLDND1-225ENST00000512147 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
CLDND1-225ENST00000512147 DCAF1Q9Y4B6 1507 aa13.63□□□□□ -0.23
CLDND1-225ENST00000512147 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
CLDND1-225ENST00000512147 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CLDND1-225ENST00000512147 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
CLDND1-225ENST00000512147 ERCC6L2Q5T890 1561 aa13.5□□□□□ -0.25
CLDND1-225ENST00000512147 RSF1Q96T23 1441 aaPredicted RBP13.48□□□□□ -0.25
CLDND1-225ENST00000512147 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CLDND1-225ENST00000512147 ZCCHC6Q5VYS8 1495 aaKnown RBP13.44□□□□□ -0.26
CLDND1-225ENST00000512147 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
CLDND1-225ENST00000512147 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
CLDND1-225ENST00000512147 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
CLDND1-225ENST00000512147 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
CLDND1-225ENST00000512147 FBLN2P98095 1184 aa13.33□□□□□ -0.28
CLDND1-225ENST00000512147 ZNF608Q9ULD9 1512 aaPredicted RBP13.27□□□□□ -0.29
CLDND1-225ENST00000512147 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
CLDND1-225ENST00000512147 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
CLDND1-225ENST00000512147 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
CLDND1-225ENST00000512147 CHD1O14646 1710 aa13.23□□□□□ -0.29
CLDND1-225ENST00000512147 URB2Q14146 1524 aaKnown RBP13.19□□□□□ -0.3
CLDND1-225ENST00000512147 IFT140Q96RY7 1462 aa13.19□□□□□ -0.3
CLDND1-225ENST00000512147 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
CLDND1-225ENST00000512147 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CLDND1-225ENST00000512147 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
CLDND1-225ENST00000512147 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
CLDND1-225ENST00000512147 KIF13AQ9H1H9 1805 aa13.07□□□□□ -0.32
CLDND1-225ENST00000512147 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
CLDND1-225ENST00000512147 KDM6BO15054 1643 aa13.06□□□□□ -0.32
CLDND1-225ENST00000512147 FAM69CQ0P6D2 419 aa13.05□□□□□ -0.32
CLDND1-225ENST00000512147 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■■□ 26.1
CLDND1-225ENST00000512147 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
CLDND1-225ENST00000512147 CHMP7Q8WUX9 453 aaPredicted RBP12.99□□□□□ -0.33
CLDND1-225ENST00000512147 SYNJ1O43426 1573 aa12.98□□□□□ -0.33
CLDND1-225ENST00000512147 CFTRP13569 1480 aa12.95□□□□□ -0.34
CLDND1-225ENST00000512147 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
CLDND1-225ENST00000512147 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
CLDND1-225ENST00000512147 MROH2BQ7Z745 1585 aa12.86□□□□□ -0.35
CLDND1-225ENST00000512147 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
CLDND1-225ENST00000512147 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
CLDND1-225ENST00000512147 SNAPC4Q5SXM2 1469 aa12.8□□□□□ -0.36
CLDND1-225ENST00000512147 ABCC8Q09428 1581 aa12.77□□□□□ -0.36
CLDND1-225ENST00000512147 TARBP1Q13395 1621 aaKnown RBP12.77□□□□□ -0.36
CLDND1-225ENST00000512147 TSPOAP1O95153 1857 aa12.76□□□□□ -0.37
CLDND1-225ENST00000512147 DIP2BQ9P265 1576 aa12.76□□□□□ -0.37
CLDND1-225ENST00000512147 TOP2BQ02880 1626 aa12.75□□□□□ -0.37
CLDND1-225ENST00000512147 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
CLDND1-225ENST00000512147 MAGI1Q96QZ7 1491 aaPredicted RBP12.73□□□□□ -0.37
CLDND1-225ENST00000512147 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
CLDND1-225ENST00000512147 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
CLDND1-225ENST00000512147 CEP170Q5SW79 1584 aa12.63□□□□□ -0.39
CLDND1-225ENST00000512147 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
CLDND1-225ENST00000512147 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
CLDND1-225ENST00000512147 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
CLDND1-225ENST00000512147 SOGA1O94964 1423 aa12.6□□□□□ -0.39
CLDND1-225ENST00000512147 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
CLDND1-225ENST00000512147 PCF11O94913 1555 aaKnown RBP12.57□□□□□ -0.4
CLDND1-225ENST00000512147 WDR97A6NE52 1622 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms