RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 CFAP44Q96MT7 982 aa13.27□□□□□ -0.29
LINC01088-209ENST00000512130 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
LINC01088-209ENST00000512130 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
LINC01088-209ENST00000512130 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
LINC01088-209ENST00000512130 RIOK3O14730 519 aaKnown RBP13.19□□□□□ -0.3
LINC01088-209ENST00000512130 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
LINC01088-209ENST00000512130 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
LINC01088-209ENST00000512130 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
LINC01088-209ENST00000512130 CHRM1P11229 460 aaPredicted RBP13.14□□□□□ -0.31
LINC01088-209ENST00000512130 VGFO15240 615 aaPredicted RBP13.11□□□□□ -0.31
LINC01088-209ENST00000512130 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
LINC01088-209ENST00000512130 STK25O00506 426 aa13.06□□□□□ -0.32
LINC01088-209ENST00000512130 BCANQ96GW7 911 aa13.06□□□□□ -0.32
LINC01088-209ENST00000512130 DNAJC5Q9H3Z4 198 aa13.06□□□□□ -0.32
LINC01088-209ENST00000512130 PYGBP11216 843 aa13.05□□□□□ -0.32
LINC01088-209ENST00000512130 FARP1Q9Y4F1 1045 aaPredicted RBP13.04□□□□□ -0.32
LINC01088-209ENST00000512130 TSHZ2Q9NRE2 1034 aa13.01□□□□□ -0.33
LINC01088-209ENST00000512130 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
LINC01088-209ENST00000512130 TSPYL2Q9H2G4 693 aaPredicted RBP13□□□□□ -0.33
LINC01088-209ENST00000512130 SGIP1Q9BQI5 828 aa12.99□□□□□ -0.33
LINC01088-209ENST00000512130 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
LINC01088-209ENST00000512130 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
LINC01088-209ENST00000512130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-209ENST00000512130 ZNF467Q7Z7K2 595 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-209ENST00000512130 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-209ENST00000512130 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
LINC01088-209ENST00000512130 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
LINC01088-209ENST00000512130 PAK3O75914 559 aaPredicted RBP12.94□□□□□ -0.34
LINC01088-209ENST00000512130 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC01088-209ENST00000512130 NKX1-1Q15270 411 aaPredicted RBP12.91□□□□□ -0.34
LINC01088-209ENST00000512130 GTPBP6O43824 516 aaPredicted RBP12.88□□□□□ -0.35
LINC01088-209ENST00000512130 CHRDL2Q6WN34 429 aa12.88□□□□□ -0.35
LINC01088-209ENST00000512130 PDAP1Q13442 181 aaKnown RBP12.85□□□□□ -0.35
LINC01088-209ENST00000512130 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
LINC01088-209ENST00000512130 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
LINC01088-209ENST00000512130 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
LINC01088-209ENST00000512130 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
LINC01088-209ENST00000512130 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
LINC01088-209ENST00000512130 PSEN1P49768 467 aa12.76□□□□□ -0.37
LINC01088-209ENST00000512130 NBR1Q14596 966 aa12.73□□□□□ -0.37
LINC01088-209ENST00000512130 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
LINC01088-209ENST00000512130 MAP3K13O43283 966 aa12.68□□□□□ -0.38
LINC01088-209ENST00000512130 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
LINC01088-209ENST00000512130 KIF12Q96FN5 646 aa12.68□□□□□ -0.38
LINC01088-209ENST00000512130 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
LINC01088-209ENST00000512130 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
LINC01088-209ENST00000512130 MFRPQ9BY79 579 aa12.59□□□□□ -0.39
LINC01088-209ENST00000512130 WDR70Q9NW82 654 aa12.59□□□□□ -0.39
LINC01088-209ENST00000512130 SOX12O15370 315 aa12.58□□□□□ -0.4
LINC01088-209ENST00000512130 NLRP6P59044 892 aa12.58□□□□□ -0.4
LINC01088-209ENST00000512130 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
LINC01088-209ENST00000512130 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
LINC01088-209ENST00000512130 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
LINC01088-209ENST00000512130 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
LINC01088-209ENST00000512130 GOLGA2Q08379 1002 aa12.55□□□□□ -0.4
LINC01088-209ENST00000512130 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
LINC01088-209ENST00000512130 PHF8Q9UPP1 1060 aa12.49□□□□□ -0.41
LINC01088-209ENST00000512130 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
LINC01088-209ENST00000512130 C19orf67A6NJJ6 358 aa12.47□□□□□ -0.41
LINC01088-209ENST00000512130 TMEM106CQ9BVX2 250 aa12.47□□□□□ -0.41
LINC01088-209ENST00000512130 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
LINC01088-209ENST00000512130 PPP1R37O75864 691 aa12.43□□□□□ -0.42
LINC01088-209ENST00000512130 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
LINC01088-209ENST00000512130 MS4A3Q96HJ5 214 aa12.43□□□□□ -0.42
LINC01088-209ENST00000512130 TIE1P35590 1138 aa12.37□□□□□ -0.43
LINC01088-209ENST00000512130 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
LINC01088-209ENST00000512130 CLCN6P51797 869 aa12.34□□□□□ -0.43
LINC01088-209ENST00000512130 TRPC6Q9Y210 931 aa12.33□□□□□ -0.44
LINC01088-209ENST00000512130 HAX1O00165 279 aa12.32□□□□□ -0.44
LINC01088-209ENST00000512130 PDE4AP27815 886 aa12.32□□□□□ -0.44
LINC01088-209ENST00000512130 E2F4Q16254 413 aa12.32□□□□□ -0.44
LINC01088-209ENST00000512130 MS4A4AQ96JQ5 239 aa12.32□□□□□ -0.44
LINC01088-209ENST00000512130 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
LINC01088-209ENST00000512130 TTLL13PA6NNM8 815 aa12.3□□□□□ -0.44
LINC01088-209ENST00000512130 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
LINC01088-209ENST00000512130 LARP6Q9BRS8 491 aaKnown RBP12.28□□□□□ -0.44
LINC01088-209ENST00000512130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01088-209ENST00000512130 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
LINC01088-209ENST00000512130 NCKAP5LQ9HCH0 1330 aa12.24□□□□□ -0.45
LINC01088-209ENST00000512130 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
LINC01088-209ENST00000512130 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-209ENST00000512130 DDX27Q96GQ7 796 aaKnown RBP12.23□□□□□ -0.45
LINC01088-209ENST00000512130 CRISPLD2Q9H0B8 497 aa12.21□□□□□ -0.45
LINC01088-209ENST00000512130 MFSD10Q14728 455 aa12.2□□□□□ -0.46
LINC01088-209ENST00000512130 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
LINC01088-209ENST00000512130 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
LINC01088-209ENST00000512130 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC01088-209ENST00000512130 G3V3G9 751 aa12.14□□□□□ -0.47
LINC01088-209ENST00000512130 SMYD5Q6GMV2 418 aa12.13□□□□□ -0.47
LINC01088-209ENST00000512130 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-209ENST00000512130 EVX2Q03828 476 aa12.11□□□□□ -0.47
LINC01088-209ENST00000512130 IER5LQ5T953 404 aa12.11□□□□□ -0.47
LINC01088-209ENST00000512130 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-209ENST00000512130 SEMA3EO15041 775 aa12.09□□□□□ -0.47
LINC01088-209ENST00000512130 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-209ENST00000512130 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
LINC01088-209ENST00000512130 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
LINC01088-209ENST00000512130 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
LINC01088-209ENST00000512130 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
LINC01088-209ENST00000512130 ARIH1Q9Y4X5 557 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms