RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
LINC01088-209ENST00000512130 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
LINC01088-209ENST00000512130 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
LINC01088-209ENST00000512130 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
LINC01088-209ENST00000512130 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
LINC01088-209ENST00000512130 FOXD1Q16676 465 aa18.93■□□□□ 0.62
LINC01088-209ENST00000512130 ADRA2BP18089 450 aa18.65■□□□□ 0.58
LINC01088-209ENST00000512130 PPP6R1Q9UPN7 881 aa18.58■□□□□ 0.56
LINC01088-209ENST00000512130 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
LINC01088-209ENST00000512130 KCNA4P22459 653 aa17.76■□□□□ 0.43
LINC01088-209ENST00000512130 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
LINC01088-209ENST00000512130 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
LINC01088-209ENST00000512130 MSH5O43196 834 aa17.35■□□□□ 0.37
LINC01088-209ENST00000512130 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
LINC01088-209ENST00000512130 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
LINC01088-209ENST00000512130 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
LINC01088-209ENST00000512130 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
LINC01088-209ENST00000512130 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
LINC01088-209ENST00000512130 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
LINC01088-209ENST00000512130 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
LINC01088-209ENST00000512130 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
LINC01088-209ENST00000512130 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
LINC01088-209ENST00000512130 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
LINC01088-209ENST00000512130 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
LINC01088-209ENST00000512130 ZBTB22O15209 634 aa16.29■□□□□ 0.2
LINC01088-209ENST00000512130 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
LINC01088-209ENST00000512130 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
LINC01088-209ENST00000512130 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
LINC01088-209ENST00000512130 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
LINC01088-209ENST00000512130 ATXN8OSP0DMR3 200 aa15.67■□□□□ 0.1
LINC01088-209ENST00000512130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC01088-209ENST00000512130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
LINC01088-209ENST00000512130 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
LINC01088-209ENST00000512130 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
LINC01088-209ENST00000512130 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
LINC01088-209ENST00000512130 APLP2Q06481 763 aa15.23■□□□□ 0.03
LINC01088-209ENST00000512130 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
LINC01088-209ENST00000512130 FKBP8Q14318 412 aa15.12■□□□□ 0.01
LINC01088-209ENST00000512130 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
LINC01088-209ENST00000512130 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
LINC01088-209ENST00000512130 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
LINC01088-209ENST00000512130 TRHP20396 242 aaPredicted RBP14.8□□□□□ -0.04
LINC01088-209ENST00000512130 CAPN15O75808 1086 aa14.76□□□□□ -0.05
LINC01088-209ENST00000512130 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
LINC01088-209ENST00000512130 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
LINC01088-209ENST00000512130 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
LINC01088-209ENST00000512130 FBLN2P98095 1184 aa14.71□□□□□ -0.05
LINC01088-209ENST00000512130 POLA2Q14181 598 aa14.66□□□□□ -0.06
LINC01088-209ENST00000512130 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
LINC01088-209ENST00000512130 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
LINC01088-209ENST00000512130 MKRN4PQ13434 485 aaPredicted RBP14.58□□□□□ -0.08
LINC01088-209ENST00000512130 ZBTB12Q9Y330 459 aaPredicted RBP14.55□□□□□ -0.08
LINC01088-209ENST00000512130 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
LINC01088-209ENST00000512130 ABCB7O75027 752 aa14.47□□□□□ -0.09
LINC01088-209ENST00000512130 PROM2Q8N271 834 aa14.36□□□□□ -0.11
LINC01088-209ENST00000512130 DSG3P32926 999 aa14.31□□□□□ -0.12
LINC01088-209ENST00000512130 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
LINC01088-209ENST00000512130 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
LINC01088-209ENST00000512130 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
LINC01088-209ENST00000512130 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
LINC01088-209ENST00000512130 SPDYE2BA6NHP3 402 aa14.14□□□□□ -0.15
LINC01088-209ENST00000512130 SPDYE6P0CI01 402 aa14.14□□□□□ -0.15
LINC01088-209ENST00000512130 SPDYE2Q495Y8 402 aa14.14□□□□□ -0.15
LINC01088-209ENST00000512130 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
LINC01088-209ENST00000512130 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
LINC01088-209ENST00000512130 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
LINC01088-209ENST00000512130 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
LINC01088-209ENST00000512130 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
LINC01088-209ENST00000512130 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
LINC01088-209ENST00000512130 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
LINC01088-209ENST00000512130 SPOCK2Q92563 424 aa13.86□□□□□ -0.19
LINC01088-209ENST00000512130 MIER1Q8N108 512 aa13.83□□□□□ -0.2
LINC01088-209ENST00000512130 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
LINC01088-209ENST00000512130 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
LINC01088-209ENST00000512130 PKD2Q13563 968 aa13.75□□□□□ -0.21
LINC01088-209ENST00000512130 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
LINC01088-209ENST00000512130 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
LINC01088-209ENST00000512130 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-209ENST00000512130 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
LINC01088-209ENST00000512130 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
LINC01088-209ENST00000512130 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
LINC01088-209ENST00000512130 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
LINC01088-209ENST00000512130 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
LINC01088-209ENST00000512130 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
LINC01088-209ENST00000512130 TRIM41Q8WV44 630 aa13.48□□□□□ -0.25
LINC01088-209ENST00000512130 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
LINC01088-209ENST00000512130 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
LINC01088-209ENST00000512130 RGL2O15211 777 aa13.44□□□□□ -0.26
LINC01088-209ENST00000512130 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
LINC01088-209ENST00000512130 GSE1Q14687 1217 aa13.44□□□□□ -0.26
LINC01088-209ENST00000512130 BBXQ8WY36 941 aaPredicted RBP13.43□□□□□ -0.26
LINC01088-209ENST00000512130 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
LINC01088-209ENST00000512130 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
LINC01088-209ENST00000512130 NUBP1P53384 320 aa13.34□□□□□ -0.27
LINC01088-209ENST00000512130 FAM212AQ96EL1 285 aa13.32□□□□□ -0.28
LINC01088-209ENST00000512130 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC01088-209ENST00000512130 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
LINC01088-209ENST00000512130 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
LINC01088-209ENST00000512130 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
LINC01088-209ENST00000512130 TAOK2Q9UL54 1235 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms