RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
SMAD5-205ENST00000509297 CUL7Q14999 1698 aa26.91■■□□□ 1.9
SMAD5-205ENST00000509297 KIAA0586Q9BVV6 1533 aa26.88■■□□□ 1.89
SMAD5-205ENST00000509297 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
SMAD5-205ENST00000509297 NPM1P06748 294 aaKnown RBP eCLIP26.68■■□□□ 1.86
SMAD5-205ENST00000509297 MAPKBP1O60336 1514 aa26.68■■□□□ 1.86
SMAD5-205ENST00000509297 KIF13AQ9H1H9 1805 aa26.66■■□□□ 1.86
SMAD5-205ENST00000509297 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
SMAD5-205ENST00000509297 ABCC10Q5T3U5 1492 aa26.63■■□□□ 1.85
SMAD5-205ENST00000509297 CARMIL2Q6F5E8 1435 aa26.6■■□□□ 1.85
SMAD5-205ENST00000509297 PTPRGP23470 1445 aa26.59■■□□□ 1.85
SMAD5-205ENST00000509297 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
SMAD5-205ENST00000509297 TNIKQ9UKE5 1360 aa26.56■■□□□ 1.84
SMAD5-205ENST00000509297 FAM69CQ0P6D2 419 aa26.55■■□□□ 1.84
SMAD5-205ENST00000509297 RAPGEF2Q9Y4G8 1499 aa26.55■■□□□ 1.84
SMAD5-205ENST00000509297 DIP2BQ9P265 1576 aa26.54■■□□□ 1.84
SMAD5-205ENST00000509297 DISP1Q96F81 1524 aa26.47■■□□□ 1.83
SMAD5-205ENST00000509297 ABCC2Q92887 1545 aa26.46■■□□□ 1.83
SMAD5-205ENST00000509297 UGGT2Q9NYU1 1516 aa26.46■■□□□ 1.83
SMAD5-205ENST00000509297 UHRF1BP1LA0JNW5 1464 aa26.45■■□□□ 1.82
SMAD5-205ENST00000509297 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
SMAD5-205ENST00000509297 UACAQ9BZF9 1416 aa26.39■■□□□ 1.82
SMAD5-205ENST00000509297 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
SMAD5-205ENST00000509297 PLB1Q6P1J6 1458 aa26.36■■□□□ 1.81
SMAD5-205ENST00000509297 ASXL2Q76L83 1435 aa26.33■■□□□ 1.81
SMAD5-205ENST00000509297 KIAA0556O60303 1618 aa26.33■■□□□ 1.81
SMAD5-205ENST00000509297 PRXQ9BXM0 1461 aa26.31■■□□□ 1.8
SMAD5-205ENST00000509297 KDM5BQ9UGL1 1544 aa26.31■■□□□ 1.8
SMAD5-205ENST00000509297 GLI2P10070 1586 aa26.31■■□□□ 1.8
SMAD5-205ENST00000509297 KDM6BO15054 1643 aa26.27■■□□□ 1.8
SMAD5-205ENST00000509297 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
SMAD5-205ENST00000509297 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
SMAD5-205ENST00000509297 TSPOAP1O95153 1857 aa26.23■■□□□ 1.79
SMAD5-205ENST00000509297 EPRSP07814 1512 aaKnown RBP26.19■■□□□ 1.78
SMAD5-205ENST00000509297 ZCCHC11Q5TAX3 1644 aaKnown RBP26.18■■□□□ 1.78
SMAD5-205ENST00000509297 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
SMAD5-205ENST00000509297 MAP3K4Q9Y6R4 1608 aa26.12■■□□□ 1.77
SMAD5-205ENST00000509297 ABCA8O94911 1581 aa26.12■■□□□ 1.77
SMAD5-205ENST00000509297 WDR7Q9Y4E6 1490 aa26.11■■□□□ 1.77
SMAD5-205ENST00000509297 CSRNP3Q8WYN3 585 aa26.09■■□□□ 1.77
SMAD5-205ENST00000509297 TEX14Q8IWB6 1497 aa26.08■■□□□ 1.77
SMAD5-205ENST00000509297 EEA1Q15075 1411 aa26.05■■□□□ 1.76
SMAD5-205ENST00000509297 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
SMAD5-205ENST00000509297 COL17A1Q9UMD9 1497 aaPredicted RBP25.99■■□□□ 1.75
SMAD5-205ENST00000509297 KDM4FA0A1W2PPD8 638 aa25.99■■□□□ 1.75
SMAD5-205ENST00000509297 SAMD9Q5K651 1589 aa25.96■■□□□ 1.75
SMAD5-205ENST00000509297 MAGI3Q5TCQ9 1506 aa25.95■■□□□ 1.74
SMAD5-205ENST00000509297 CFAP43Q8NDM7 1665 aa25.93■■□□□ 1.74
SMAD5-205ENST00000509297 CD109Q6YHK3 1445 aa25.93■■□□□ 1.74
SMAD5-205ENST00000509297 P3H3Q8IVL6 736 aa25.89■■□□□ 1.74
SMAD5-205ENST00000509297 ATP10BO94823 1461 aa25.89■■□□□ 1.73
SMAD5-205ENST00000509297 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
SMAD5-205ENST00000509297 RAPGEF6Q8TEU7 1601 aa25.81■■□□□ 1.72
SMAD5-205ENST00000509297 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
SMAD5-205ENST00000509297 KIF21BO75037 1637 aa25.79■■□□□ 1.72
SMAD5-205ENST00000509297 ARID3CA6NKF2 412 aa25.76■■□□□ 1.71
SMAD5-205ENST00000509297 ARAP3Q8WWN8 1544 aa25.76■■□□□ 1.71
SMAD5-205ENST00000509297 ABCA9Q8IUA7 1624 aa25.76■■□□□ 1.71
SMAD5-205ENST00000509297 NUP153P49790 1475 aaKnown RBP25.75■■□□□ 1.71
SMAD5-205ENST00000509297 PHLDB1Q86UU1 1377 aa25.75■■□□□ 1.71
SMAD5-205ENST00000509297 EFCAB5A4FU69 1503 aa25.73■■□□□ 1.71
SMAD5-205ENST00000509297 FHOD3Q2V2M9 1422 aa25.72■■□□□ 1.71
SMAD5-205ENST00000509297 NEO1Q92859 1461 aa25.66■■□□□ 1.7
SMAD5-205ENST00000509297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.65■■□□□ 1.7
SMAD5-205ENST00000509297 RANGAP1P46060 587 aaPredicted RBP25.65■■□□□ 1.7
SMAD5-205ENST00000509297 HNRNPUL2Q1KMD3 747 aaKnown RBP25.65■■□□□ 1.7
SMAD5-205ENST00000509297 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
SMAD5-205ENST00000509297 PLEKHD1A6NEE1 506 aa25.6■■□□□ 1.69
SMAD5-205ENST00000509297 UBTFP17480 764 aaKnown RBP25.52■■□□□ 1.68
SMAD5-205ENST00000509297 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
SMAD5-205ENST00000509297 FMN1Q68DA7 1419 aa25.5■■□□□ 1.67
SMAD5-205ENST00000509297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.48■■□□□ 1.67
SMAD5-205ENST00000509297 FRMPD1Q5SYB0 1578 aa25.48■■□□□ 1.67
SMAD5-205ENST00000509297 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
SMAD5-205ENST00000509297 CFAP74Q9C0B2 1584 aa25.45■■□□□ 1.66
SMAD5-205ENST00000509297 FANCAO15360 1455 aa25.45■■□□□ 1.66
SMAD5-205ENST00000509297 AKNAQ7Z591 1439 aa25.45■■□□□ 1.66
SMAD5-205ENST00000509297 CDK13Q14004 1512 aaKnown RBP25.44■■□□□ 1.66
SMAD5-205ENST00000509297 DENND4BO75064 1496 aaPredicted RBP25.44■■□□□ 1.66
SMAD5-205ENST00000509297 TTC37Q6PGP7 1564 aa25.42■■□□□ 1.66
SMAD5-205ENST00000509297 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
SMAD5-205ENST00000509297 HECW2Q9P2P5 1572 aa25.41■■□□□ 1.66
SMAD5-205ENST00000509297 ADAMTSL3P82987 1691 aa25.39■■□□□ 1.65
SMAD5-205ENST00000509297 RICTORQ6R327 1708 aa25.38■■□□□ 1.65
SMAD5-205ENST00000509297 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
SMAD5-205ENST00000509297 CDK11AQ9UQ88 783 aaPredicted RBP25.37■■□□□ 1.65
SMAD5-205ENST00000509297 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
SMAD5-205ENST00000509297 PLCH2O75038 1416 aa25.37■■□□□ 1.65
SMAD5-205ENST00000509297 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
SMAD5-205ENST00000509297 MAGI2Q86UL8 1455 aa25.33■■□□□ 1.65
SMAD5-205ENST00000509297 PTPRMP28827 1452 aa25.32■■□□□ 1.64
SMAD5-205ENST00000509297 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
SMAD5-205ENST00000509297 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
SMAD5-205ENST00000509297 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
SMAD5-205ENST00000509297 ARID4BQ4LE39 1312 aaPredicted RBP25.28■■□□□ 1.64
SMAD5-205ENST00000509297 POGZQ7Z3K3 1410 aa25.27■■□□□ 1.64
SMAD5-205ENST00000509297 EFCAB2Q5VUJ9 269 aa25.26■■□□□ 1.63
SMAD5-205ENST00000509297 SCAPERQ9BY12 1400 aa25.26■■□□□ 1.63
SMAD5-205ENST00000509297 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
SMAD5-205ENST00000509297 KIF14Q15058 1648 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms