RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 PRG4Q92954 1404 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-218ENST00000508503 RUSC2Q8N2Y8 1516 aa20.85■□□□□ 0.93
CLDND1-218ENST00000508503 KIAA0586Q9BVV6 1533 aa20.85■□□□□ 0.93
CLDND1-218ENST00000508503 TRHP20396 242 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-218ENST00000508503 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
CLDND1-218ENST00000508503 IQGAP2Q13576 1575 aa20.63■□□□□ 0.89
CLDND1-218ENST00000508503 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
CLDND1-218ENST00000508503 PRXQ9BXM0 1461 aa20.59■□□□□ 0.89
CLDND1-218ENST00000508503 PTPRGP23470 1445 aa20.59■□□□□ 0.89
CLDND1-218ENST00000508503 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
CLDND1-218ENST00000508503 UGGT2Q9NYU1 1516 aa20.57■□□□□ 0.88
CLDND1-218ENST00000508503 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
CLDND1-218ENST00000508503 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
CLDND1-218ENST00000508503 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
CLDND1-218ENST00000508503 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
CLDND1-218ENST00000508503 MAPKBP1O60336 1514 aa20.52■□□□□ 0.87
CLDND1-218ENST00000508503 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
CLDND1-218ENST00000508503 ABCC10Q5T3U5 1492 aa20.48■□□□□ 0.87
CLDND1-218ENST00000508503 UHRF1BP1LA0JNW5 1464 aa20.46■□□□□ 0.87
CLDND1-218ENST00000508503 EEA1Q15075 1411 aa20.45■□□□□ 0.86
CLDND1-218ENST00000508503 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
CLDND1-218ENST00000508503 UACAQ9BZF9 1416 aa20.44■□□□□ 0.86
CLDND1-218ENST00000508503 ABCC2Q92887 1545 aa20.43■□□□□ 0.86
CLDND1-218ENST00000508503 KIAA0556O60303 1618 aa20.43■□□□□ 0.86
CLDND1-218ENST00000508503 FAM69CQ0P6D2 419 aa20.43■□□□□ 0.86
CLDND1-218ENST00000508503 TTBK1Q5TCY1 1321 aaPredicted RBP20.42■□□□□ 0.86
CLDND1-218ENST00000508503 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
CLDND1-218ENST00000508503 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
CLDND1-218ENST00000508503 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
CLDND1-218ENST00000508503 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
CLDND1-218ENST00000508503 PLB1Q6P1J6 1458 aa20.34■□□□□ 0.85
CLDND1-218ENST00000508503 ASXL2Q76L83 1435 aa20.32■□□□□ 0.84
CLDND1-218ENST00000508503 ABCA8O94911 1581 aa20.28■□□□□ 0.84
CLDND1-218ENST00000508503 GLI2P10070 1586 aa20.28■□□□□ 0.84
CLDND1-218ENST00000508503 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-218ENST00000508503 ZCCHC11Q5TAX3 1644 aaKnown RBP20.24■□□□□ 0.83
CLDND1-218ENST00000508503 SAMD9Q5K651 1589 aa20.23■□□□□ 0.83
CLDND1-218ENST00000508503 KIF21BO75037 1637 aa20.23■□□□□ 0.83
CLDND1-218ENST00000508503 EPRSP07814 1512 aaKnown RBP20.22■□□□□ 0.83
CLDND1-218ENST00000508503 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
CLDND1-218ENST00000508503 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
CLDND1-218ENST00000508503 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
CLDND1-218ENST00000508503 PPRC1Q5VV67 1664 aaKnown RBP20.15■□□□□ 0.82
CLDND1-218ENST00000508503 ATP10BO94823 1461 aa20.13■□□□□ 0.81
CLDND1-218ENST00000508503 MAP3K4Q9Y6R4 1608 aa20.13■□□□□ 0.81
CLDND1-218ENST00000508503 KDM6BO15054 1643 aa20.11■□□□□ 0.81
CLDND1-218ENST00000508503 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
CLDND1-218ENST00000508503 RAPGEF6Q8TEU7 1601 aa20.07■□□□□ 0.8
CLDND1-218ENST00000508503 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
CLDND1-218ENST00000508503 RANGAP1P46060 587 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-218ENST00000508503 FHOD3Q2V2M9 1422 aa20.06■□□□□ 0.8
CLDND1-218ENST00000508503 KCNH8Q96L42 1107 aa20.06■□□□□ 0.8
CLDND1-218ENST00000508503 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
CLDND1-218ENST00000508503 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-218ENST00000508503 CD109Q6YHK3 1445 aa20.03■□□□□ 0.8
CLDND1-218ENST00000508503 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
CLDND1-218ENST00000508503 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
CLDND1-218ENST00000508503 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.8
CLDND1-218ENST00000508503 ARID3CA6NKF2 412 aa20■□□□□ 0.79
CLDND1-218ENST00000508503 AEBP2Q6ZN18 517 aaPredicted RBP19.96■□□□□ 0.79
CLDND1-218ENST00000508503 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
CLDND1-218ENST00000508503 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
CLDND1-218ENST00000508503 ABCA9Q8IUA7 1624 aa19.94■□□□□ 0.78
CLDND1-218ENST00000508503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
CLDND1-218ENST00000508503 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
CLDND1-218ENST00000508503 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
CLDND1-218ENST00000508503 FMN1Q68DA7 1419 aa19.91■□□□□ 0.78
CLDND1-218ENST00000508503 PHLDB1Q86UU1 1377 aa19.9■□□□□ 0.78
CLDND1-218ENST00000508503 KDM4FA0A1W2PPD8 638 aa19.89■□□□□ 0.77
CLDND1-218ENST00000508503 ARAP3Q8WWN8 1544 aa19.88■□□□□ 0.77
CLDND1-218ENST00000508503 NEO1Q92859 1461 aa19.82■□□□□ 0.76
CLDND1-218ENST00000508503 CDK13Q14004 1512 aaKnown RBP19.81■□□□□ 0.76
CLDND1-218ENST00000508503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.76
CLDND1-218ENST00000508503 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
CLDND1-218ENST00000508503 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
CLDND1-218ENST00000508503 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
CLDND1-218ENST00000508503 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
CLDND1-218ENST00000508503 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
CLDND1-218ENST00000508503 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 PLCH2O75038 1416 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 CLIP1P30622 1438 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 AKNAQ7Z591 1439 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 ADGRL1O94910 1474 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 LRRIQ1Q96JM4 1722 aa19.71■□□□□ 0.75
CLDND1-218ENST00000508503 FANCAO15360 1455 aa19.7■□□□□ 0.74
CLDND1-218ENST00000508503 TROQ12816 1431 aaPredicted RBP19.69■□□□□ 0.74
CLDND1-218ENST00000508503 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
CLDND1-218ENST00000508503 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
CLDND1-218ENST00000508503 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
CLDND1-218ENST00000508503 CCDC18Q5T9S5 1454 aa19.65■□□□□ 0.74
CLDND1-218ENST00000508503 PCF11O94913 1555 aaKnown RBP19.65■□□□□ 0.74
CLDND1-218ENST00000508503 EFCAB2Q5VUJ9 269 aa19.64■□□□□ 0.73
CLDND1-218ENST00000508503 FYCO1Q9BQS8 1478 aa19.64■□□□□ 0.73
CLDND1-218ENST00000508503 RICTORQ6R327 1708 aa19.63■□□□□ 0.73
CLDND1-218ENST00000508503 KIF14Q15058 1648 aa19.62■□□□□ 0.73
CLDND1-218ENST00000508503 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
CLDND1-218ENST00000508503 SCAPERQ9BY12 1400 aa19.59■□□□□ 0.73
CLDND1-218ENST00000508503 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
CLDND1-218ENST00000508503 MAGI2Q86UL8 1455 aa19.56■□□□□ 0.72
CLDND1-218ENST00000508503 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms