RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 DNMBPQ6XZF7 1577 aa6.94□□□□□ -1.3
ATP2C1-212ENST00000507488 ERICH3Q5RHP9 1530 aa6.93□□□□□ -1.3
ATP2C1-212ENST00000507488 FBLN2P98095 1184 aa6.93□□□□□ -1.3
ATP2C1-212ENST00000507488 PDS5BQ9NTI5 1447 aa6.93□□□□□ -1.3
ATP2C1-212ENST00000507488 FAM50AQ14320 339 aaKnown RBP6.92□□□□□ -1.3
ATP2C1-212ENST00000507488 ABCA10Q8WWZ4 1543 aa6.92□□□□□ -1.3
ATP2C1-212ENST00000507488 HIRIP3Q9BW71 556 aaPredicted RBP6.9□□□□□ -1.3
ATP2C1-212ENST00000507488 GAPVD1Q14C86 1478 aa6.9□□□□□ -1.3
ATP2C1-212ENST00000507488 PCF11O94913 1555 aaKnown RBP6.9□□□□□ -1.31
ATP2C1-212ENST00000507488 SIN3AQ96ST3 1273 aa6.89□□□□□ -1.31
ATP2C1-212ENST00000507488 LAMC3Q9Y6N6 1575 aa6.88□□□□□ -1.31
ATP2C1-212ENST00000507488 TARBP1Q13395 1621 aaKnown RBP6.88□□□□□ -1.31
ATP2C1-212ENST00000507488 CHIC2Q9UKJ5 165 aa6.87□□□□□ -1.31
ATP2C1-212ENST00000507488 LRRIQ1Q96JM4 1722 aa6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 DHX57Q6P158 1386 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 WDR97A6NE52 1622 aa6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 YTHDC1Q96MU7 727 aaKnown RBP6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 PTPRKQ15262 1439 aa6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 ABCA5Q8WWZ7 1642 aa6.86□□□□□ -1.31
ATP2C1-212ENST00000507488 NEUROD1Q13562 356 aa6.85□□□□□ -1.31
ATP2C1-212ENST00000507488 MAGI3Q5TCQ9 1506 aa6.85□□□□□ -1.31
ATP2C1-212ENST00000507488 CCNB3Q8WWL7 1395 aa6.85□□□□□ -1.31
ATP2C1-212ENST00000507488 ZNF644Q9H582 1327 aaPredicted RBP6.85□□□□□ -1.31
ATP2C1-212ENST00000507488 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
ATP2C1-212ENST00000507488 LRRC9Q6ZRR7 1453 aa6.84□□□□□ -1.31
ATP2C1-212ENST00000507488 ERCC6Q03468 1493 aa6.84□□□□□ -1.31
ATP2C1-212ENST00000507488 CDK13Q14004 1512 aaKnown RBP6.83□□□□□ -1.32
ATP2C1-212ENST00000507488 TIAM1Q13009 1591 aa6.83□□□□□ -1.32
ATP2C1-212ENST00000507488 RAB3GAP2Q9H2M9 1393 aa6.83□□□□□ -1.32
ATP2C1-212ENST00000507488 MIER1Q8N108 512 aa6.83□□□□□ -1.32
ATP2C1-212ENST00000507488 MSH5O43196 834 aa6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 SNAPC4Q5SXM2 1469 aa6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 KCNH8Q96L42 1107 aa6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 RRP7BPQ9NSQ0 103 aa6.82□□□□□ -1.32
ATP2C1-212ENST00000507488 SCAF1Q9H7N4 1312 aaKnown RBP6.81□□□□□ -1.32
ATP2C1-212ENST00000507488 PBRM1Q86U86 1689 aa6.79□□□□□ -1.32
ATP2C1-212ENST00000507488 CTTNBP2Q8WZ74 1663 aa6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 CHMP7Q8WUX9 453 aaPredicted RBP6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 EIF4G3O43432 1585 aaKnown RBP6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 ZNF316A6NFI3 1004 aaPredicted RBP6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 MAPKBP1O60336 1514 aa6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 MTUS2Q5JR59 1369 aa6.78□□□□□ -1.32
ATP2C1-212ENST00000507488 PLB1Q6P1J6 1458 aa6.77□□□□□ -1.33
ATP2C1-212ENST00000507488 CASKIN1Q8WXD9 1431 aa6.77□□□□□ -1.33
ATP2C1-212ENST00000507488 ADAMTS12P58397 1594 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 KDM6BO15054 1643 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 CUL7Q14999 1698 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 GRIN2BQ13224 1484 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 THOC2Q8NI27 1593 aaKnown RBP6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 WDR62O43379 1518 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 DISP1Q96F81 1524 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 FHAD1B1AJZ9 1412 aa6.76□□□□□ -1.33
ATP2C1-212ENST00000507488 SAMD9Q5K651 1589 aa6.75□□□□□ -1.33
ATP2C1-212ENST00000507488 ZNF777Q9ULD5 760 aaPredicted RBP6.75□□□□□ -1.33
ATP2C1-212ENST00000507488 CEP170Q5SW79 1584 aa6.75□□□□□ -1.33
ATP2C1-212ENST00000507488 PRG4Q92954 1404 aaPredicted RBP6.75□□□□□ -1.33
ATP2C1-212ENST00000507488 NCOA2Q15596 1464 aa6.75□□□□□ -1.33
ATP2C1-212ENST00000507488 CENPBP07199 599 aaPredicted RBP6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 FGD6Q6ZV73 1430 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 FYCO1Q9BQS8 1478 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 CFAP43Q8NDM7 1665 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 ERCC6L2Q5T890 1561 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 JPH4Q96JJ6 628 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 IQGAP2Q13576 1575 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 GRIN2AQ12879 1464 aa6.73□□□□□ -1.33
ATP2C1-212ENST00000507488 SETD5Q9C0A6 1442 aa6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 KCNA4P22459 653 aa6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 IFT140Q96RY7 1462 aa6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 PIAS4Q8N2W9 510 aaPredicted RBP6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 PPP6R1Q9UPN7 881 aa6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 EPRSP07814 1512 aaKnown RBP6.72□□□□□ -1.33
ATP2C1-212ENST00000507488 DENND4BO75064 1496 aaPredicted RBP6.71□□□□□ -1.33
ATP2C1-212ENST00000507488 NUP153P49790 1475 aaKnown RBP6.71□□□□□ -1.33
ATP2C1-212ENST00000507488 FMN1Q68DA7 1419 aa6.71□□□□□ -1.34
ATP2C1-212ENST00000507488 SENP3-EIF4A1A0A087X0R7 540 aa6.7□□□□□ -1.34
ATP2C1-212ENST00000507488 CNGB1Q14028 1251 aaPredicted RBP6.7□□□□□ -1.34
ATP2C1-212ENST00000507488 EFCAB5A4FU69 1503 aa6.7□□□□□ -1.34
ATP2C1-212ENST00000507488 ADRA2BP18089 450 aa6.69□□□□□ -1.34
ATP2C1-212ENST00000507488 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
ATP2C1-212ENST00000507488 CLSPNQ9HAW4 1339 aa6.69□□□□□ -1.34
ATP2C1-212ENST00000507488 PELP1Q8IZL8 1130 aaKnown RBP6.69□□□□□ -1.34
ATP2C1-212ENST00000507488 NAIPQ13075 1403 aa6.69□□□□□ -1.34
ATP2C1-212ENST00000507488 DDX10Q13206 875 aaKnown RBP6.68□□□□□ -1.34
ATP2C1-212ENST00000507488 KIF14Q15058 1648 aa6.68□□□□□ -1.34
ATP2C1-212ENST00000507488 MYOM3Q5VTT5 1437 aa6.68□□□□□ -1.34
ATP2C1-212ENST00000507488 KIAA0556O60303 1618 aa6.68□□□□□ -1.34
ATP2C1-212ENST00000507488 GTF3C3Q9Y5Q9 886 aa6.67□□□□□ -1.34
ATP2C1-212ENST00000507488 KIAA0586Q9BVV6 1533 aa6.67□□□□□ -1.34
ATP2C1-212ENST00000507488 HNRNPMP52272 730 aaKnown RBP eCLIP6.67□□□□□ -1.345e-7■■■■■ 28.1
ATP2C1-212ENST00000507488 CCDC18Q5T9S5 1454 aa6.67□□□□□ -1.34
ATP2C1-212ENST00000507488 UGGT2Q9NYU1 1516 aa6.66□□□□□ -1.34
ATP2C1-212ENST00000507488 MAP3K1Q13233 1512 aa6.66□□□□□ -1.34
ATP2C1-212ENST00000507488 PTPN23Q9H3S7 1636 aa6.66□□□□□ -1.34
ATP2C1-212ENST00000507488 SYNJ2O15056 1496 aa6.66□□□□□ -1.34
ATP2C1-212ENST00000507488 SUPT6HQ7KZ85 1726 aaKnown RBP6.65□□□□□ -1.34
ATP2C1-212ENST00000507488 C11orf95C9JLR9 678 aaPredicted RBP6.64□□□□□ -1.35
ATP2C1-212ENST00000507488 ARHGEF11O15085 1522 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms