RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
SNHG4-203ENST00000506188 SHROOM2Q13796 1616 aa23.6■■□□□ 1.37
SNHG4-203ENST00000506188 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.37
SNHG4-203ENST00000506188 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
SNHG4-203ENST00000506188 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
SNHG4-203ENST00000506188 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
SNHG4-203ENST00000506188 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
SNHG4-203ENST00000506188 PTPRGP23470 1445 aa23.44■■□□□ 1.34
SNHG4-203ENST00000506188 TTBK1Q5TCY1 1321 aaPredicted RBP23.43■■□□□ 1.34
SNHG4-203ENST00000506188 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
SNHG4-203ENST00000506188 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
SNHG4-203ENST00000506188 IQGAP2Q13576 1575 aa23.41■■□□□ 1.34
SNHG4-203ENST00000506188 TNIKQ9UKE5 1360 aa23.4■■□□□ 1.34
SNHG4-203ENST00000506188 EEA1Q15075 1411 aa23.37■■□□□ 1.33
SNHG4-203ENST00000506188 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
SNHG4-203ENST00000506188 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
SNHG4-203ENST00000506188 UGGT2Q9NYU1 1516 aa23.27■■□□□ 1.32
SNHG4-203ENST00000506188 FAM69CQ0P6D2 419 aa23.25■■□□□ 1.31
SNHG4-203ENST00000506188 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
SNHG4-203ENST00000506188 DISP1Q96F81 1524 aa23.23■■□□□ 1.31
SNHG4-203ENST00000506188 UACAQ9BZF9 1416 aa23.22■■□□□ 1.31
SNHG4-203ENST00000506188 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
SNHG4-203ENST00000506188 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
SNHG4-203ENST00000506188 ABCC2Q92887 1545 aa23.17■■□□□ 1.3
SNHG4-203ENST00000506188 UHRF1BP1LA0JNW5 1464 aa23.17■■□□□ 1.3
SNHG4-203ENST00000506188 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
SNHG4-203ENST00000506188 KIAA0556O60303 1618 aa23.14■■□□□ 1.29
SNHG4-203ENST00000506188 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
SNHG4-203ENST00000506188 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
SNHG4-203ENST00000506188 P3H3Q8IVL6 736 aa23.1■■□□□ 1.29
SNHG4-203ENST00000506188 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.29
SNHG4-203ENST00000506188 UBTFP17480 764 aaKnown RBP23.07■■□□□ 1.28
SNHG4-203ENST00000506188 ASXL2Q76L83 1435 aa23.06■■□□□ 1.28
SNHG4-203ENST00000506188 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
SNHG4-203ENST00000506188 DIP2BQ9P265 1576 aa22.99■■□□□ 1.27
SNHG4-203ENST00000506188 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
SNHG4-203ENST00000506188 KIF21BO75037 1637 aa22.96■■□□□ 1.27
SNHG4-203ENST00000506188 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.95■■□□□ 1.26
SNHG4-203ENST00000506188 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
SNHG4-203ENST00000506188 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
SNHG4-203ENST00000506188 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
SNHG4-203ENST00000506188 ABCA8O94911 1581 aa22.9■■□□□ 1.26
SNHG4-203ENST00000506188 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
SNHG4-203ENST00000506188 WDR7Q9Y4E6 1490 aa22.9■■□□□ 1.26
SNHG4-203ENST00000506188 EPRSP07814 1512 aaKnown RBP22.88■■□□□ 1.25
SNHG4-203ENST00000506188 GLI2P10070 1586 aa22.88■■□□□ 1.25
SNHG4-203ENST00000506188 ZCCHC11Q5TAX3 1644 aaKnown RBP22.87■■□□□ 1.25
SNHG4-203ENST00000506188 SAMD9Q5K651 1589 aa22.86■■□□□ 1.25
SNHG4-203ENST00000506188 EFCAB5A4FU69 1503 aa22.84■■□□□ 1.25
SNHG4-203ENST00000506188 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
SNHG4-203ENST00000506188 FHOD3Q2V2M9 1422 aa22.83■■□□□ 1.25
SNHG4-203ENST00000506188 TEX14Q8IWB6 1497 aa22.83■■□□□ 1.25
SNHG4-203ENST00000506188 ATP10BO94823 1461 aa22.8■■□□□ 1.24
SNHG4-203ENST00000506188 PLEKHD1A6NEE1 506 aa22.8■■□□□ 1.24
SNHG4-203ENST00000506188 CD109Q6YHK3 1445 aa22.78■■□□□ 1.24
SNHG4-203ENST00000506188 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
SNHG4-203ENST00000506188 KDM6BO15054 1643 aa22.77■■□□□ 1.24
SNHG4-203ENST00000506188 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
SNHG4-203ENST00000506188 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
SNHG4-203ENST00000506188 TSPOAP1O95153 1857 aa22.74■■□□□ 1.23
SNHG4-203ENST00000506188 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
SNHG4-203ENST00000506188 NUP153P49790 1475 aaKnown RBP22.69■■□□□ 1.22
SNHG4-203ENST00000506188 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
SNHG4-203ENST00000506188 MAGI3Q5TCQ9 1506 aa22.67■■□□□ 1.22
SNHG4-203ENST00000506188 PHLDB1Q86UU1 1377 aa22.64■■□□□ 1.22
SNHG4-203ENST00000506188 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.21
SNHG4-203ENST00000506188 CFAP43Q8NDM7 1665 aa22.62■■□□□ 1.21
SNHG4-203ENST00000506188 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
SNHG4-203ENST00000506188 COL17A1Q9UMD9 1497 aaPredicted RBP22.54■■□□□ 1.2
SNHG4-203ENST00000506188 CLIP1P30622 1438 aa22.54■■□□□ 1.2
SNHG4-203ENST00000506188 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
SNHG4-203ENST00000506188 ABCA9Q8IUA7 1624 aa22.52■■□□□ 1.2
SNHG4-203ENST00000506188 NEO1Q92859 1461 aa22.51■■□□□ 1.19
SNHG4-203ENST00000506188 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
SNHG4-203ENST00000506188 ARAP3Q8WWN8 1544 aa22.48■■□□□ 1.19
SNHG4-203ENST00000506188 CASKIN1Q8WXD9 1431 aa22.47■■□□□ 1.19
SNHG4-203ENST00000506188 RAPGEF3O95398 923 aa22.43■■□□□ 1.18
SNHG4-203ENST00000506188 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
SNHG4-203ENST00000506188 CCDC18Q5T9S5 1454 aa22.42■■□□□ 1.18
SNHG4-203ENST00000506188 KDM4FA0A1W2PPD8 638 aa22.42■■□□□ 1.18
SNHG4-203ENST00000506188 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
SNHG4-203ENST00000506188 FANCAO15360 1455 aa22.41■■□□□ 1.18
SNHG4-203ENST00000506188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.182e-37■□□□□ 9.1
SNHG4-203ENST00000506188 AKNAQ7Z591 1439 aa22.4■■□□□ 1.18
SNHG4-203ENST00000506188 PLCH2O75038 1416 aa22.38■■□□□ 1.17
SNHG4-203ENST00000506188 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
SNHG4-203ENST00000506188 FYCO1Q9BQS8 1478 aa22.37■■□□□ 1.17
SNHG4-203ENST00000506188 CFAP74Q9C0B2 1584 aa22.33■■□□□ 1.17
SNHG4-203ENST00000506188 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
SNHG4-203ENST00000506188 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
SNHG4-203ENST00000506188 KIF14Q15058 1648 aa22.31■■□□□ 1.16
SNHG4-203ENST00000506188 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
SNHG4-203ENST00000506188 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
SNHG4-203ENST00000506188 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
SNHG4-203ENST00000506188 TTC37Q6PGP7 1564 aa22.29■■□□□ 1.16
SNHG4-203ENST00000506188 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
SNHG4-203ENST00000506188 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
SNHG4-203ENST00000506188 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
SNHG4-203ENST00000506188 ARHGAP5Q13017 1502 aa22.25■■□□□ 1.15
SNHG4-203ENST00000506188 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms