RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 KIAA0586Q9BVV6 1533 aa26.07■■□□□ 1.76
AFF1-205ENST00000504956 IQGAP2Q13576 1575 aa26.06■■□□□ 1.76
AFF1-205ENST00000504956 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
AFF1-205ENST00000504956 GOLGA3Q08378 1498 aa26.05■■□□□ 1.76
AFF1-205ENST00000504956 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
AFF1-205ENST00000504956 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
AFF1-205ENST00000504956 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
AFF1-205ENST00000504956 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
AFF1-205ENST00000504956 ARHGEF11O15085 1522 aa25.97■■□□□ 1.75
AFF1-205ENST00000504956 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
AFF1-205ENST00000504956 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
AFF1-205ENST00000504956 UBTFP17480 764 aaKnown RBP25.93■■□□□ 1.74
AFF1-205ENST00000504956 PRG4Q92954 1404 aaPredicted RBP25.9■■□□□ 1.74
AFF1-205ENST00000504956 UGGT2Q9NYU1 1516 aa25.88■■□□□ 1.73
AFF1-205ENST00000504956 DISP1Q96F81 1524 aa25.82■■□□□ 1.72
AFF1-205ENST00000504956 KIAA0556O60303 1618 aa25.82■■□□□ 1.72
AFF1-205ENST00000504956 RANGAP1P46060 587 aaPredicted RBP25.8■■□□□ 1.72
AFF1-205ENST00000504956 LOC105371045A0A1W2PR82 267 aa25.79■■□□□ 1.72
AFF1-205ENST00000504956 ARAP1Q96P48 1450 aa25.79■■□□□ 1.72
AFF1-205ENST00000504956 CARMIL2Q6F5E8 1435 aa25.77■■□□□ 1.72
AFF1-205ENST00000504956 SAMD9Q5K651 1589 aa25.77■■□□□ 1.72
AFF1-205ENST00000504956 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
AFF1-205ENST00000504956 EFCAB5A4FU69 1503 aa25.69■■□□□ 1.7
AFF1-205ENST00000504956 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
AFF1-205ENST00000504956 P3H3Q8IVL6 736 aa25.67■■□□□ 1.7
AFF1-205ENST00000504956 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
AFF1-205ENST00000504956 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.69
AFF1-205ENST00000504956 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
AFF1-205ENST00000504956 PTPRGP23470 1445 aa25.62■■□□□ 1.69
AFF1-205ENST00000504956 CLIP1P30622 1438 aa25.59■■□□□ 1.69
AFF1-205ENST00000504956 CEP162Q5TB80 1403 aa25.58■■□□□ 1.69
AFF1-205ENST00000504956 ADCY10Q96PN6 1610 aa25.53■■□□□ 1.68
AFF1-205ENST00000504956 PLB1Q6P1J6 1458 aa25.49■■□□□ 1.67
AFF1-205ENST00000504956 ABCA8O94911 1581 aa25.48■■□□□ 1.67
AFF1-205ENST00000504956 UACAQ9BZF9 1416 aa25.47■■□□□ 1.67
AFF1-205ENST00000504956 RAPGEF6Q8TEU7 1601 aa25.46■■□□□ 1.67
AFF1-205ENST00000504956 ABCC2Q92887 1545 aa25.46■■□□□ 1.67
AFF1-205ENST00000504956 UHRF1BP1LA0JNW5 1464 aa25.41■■□□□ 1.66
AFF1-205ENST00000504956 FMN1Q68DA7 1419 aa25.41■■□□□ 1.66
AFF1-205ENST00000504956 PCF11O94913 1555 aaKnown RBP25.38■■□□□ 1.65
AFF1-205ENST00000504956 ZCCHC11Q5TAX3 1644 aaKnown RBP25.36■■□□□ 1.65
AFF1-205ENST00000504956 HECW1Q76N89 1606 aa25.34■■□□□ 1.65
AFF1-205ENST00000504956 LRRIQ1Q96JM4 1722 aa25.33■■□□□ 1.65
AFF1-205ENST00000504956 NUP153P49790 1475 aaKnown RBP25.32■■□□□ 1.64
AFF1-205ENST00000504956 KDM5BQ9UGL1 1544 aa25.31■■□□□ 1.64
AFF1-205ENST00000504956 ARID3CA6NKF2 412 aa25.3■■□□□ 1.64
AFF1-205ENST00000504956 NPM1P06748 294 aaKnown RBP eCLIP25.28■■□□□ 1.64
AFF1-205ENST00000504956 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
AFF1-205ENST00000504956 ATP1B4Q9UN42 357 aaPredicted RBP25.26■■□□□ 1.63
AFF1-205ENST00000504956 FYCO1Q9BQS8 1478 aa25.25■■□□□ 1.63
AFF1-205ENST00000504956 ATP10BO94823 1461 aa25.23■■□□□ 1.63
AFF1-205ENST00000504956 CDK13Q14004 1512 aaKnown RBP25.23■■□□□ 1.63
AFF1-205ENST00000504956 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
AFF1-205ENST00000504956 MAPKBP1O60336 1514 aa25.23■■□□□ 1.63
AFF1-205ENST00000504956 EPRSP07814 1512 aaKnown RBP25.21■■□□□ 1.63
AFF1-205ENST00000504956 ASXL2Q76L83 1435 aa25.17■■□□□ 1.62
AFF1-205ENST00000504956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
AFF1-205ENST00000504956 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
AFF1-205ENST00000504956 CCDC18Q5T9S5 1454 aa25.13■■□□□ 1.61
AFF1-205ENST00000504956 KIF13AQ9H1H9 1805 aa25.13■■□□□ 1.61
AFF1-205ENST00000504956 WDR7Q9Y4E6 1490 aa25.11■■□□□ 1.61
AFF1-205ENST00000504956 CFAP43Q8NDM7 1665 aa25.1■■□□□ 1.61
AFF1-205ENST00000504956 DIP2BQ9P265 1576 aa25.09■■□□□ 1.61
AFF1-205ENST00000504956 ABCC10Q5T3U5 1492 aa25.04■■□□□ 1.6
AFF1-205ENST00000504956 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
AFF1-205ENST00000504956 MAGI3Q5TCQ9 1506 aa25.02■■□□□ 1.6
AFF1-205ENST00000504956 TRHP20396 242 aaPredicted RBP25.02■■□□□ 1.6
AFF1-205ENST00000504956 PLEKHD1A6NEE1 506 aa25.01■■□□□ 1.59
AFF1-205ENST00000504956 KCNH8Q96L42 1107 aa25■■□□□ 1.59
AFF1-205ENST00000504956 TSPOAP1O95153 1857 aa24.98■■□□□ 1.59
AFF1-205ENST00000504956 KIF14Q15058 1648 aa24.98■■□□□ 1.59
AFF1-205ENST00000504956 CDK11AQ9UQ88 783 aaPredicted RBP24.97■■□□□ 1.59
AFF1-205ENST00000504956 GLI2P10070 1586 aa24.97■■□□□ 1.59
AFF1-205ENST00000504956 FAM69CQ0P6D2 419 aa24.97■■□□□ 1.59
AFF1-205ENST00000504956 TROQ12816 1431 aaPredicted RBP24.96■■□□□ 1.59
AFF1-205ENST00000504956 MAP3K4Q9Y6R4 1608 aa24.94■■□□□ 1.58
AFF1-205ENST00000504956 ABCA9Q8IUA7 1624 aa24.93■■□□□ 1.58
AFF1-205ENST00000504956 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
AFF1-205ENST00000504956 EHBP1L1Q8N3D4 1523 aa24.92■■□□□ 1.58
AFF1-205ENST00000504956 TTC37Q6PGP7 1564 aa24.92■■□□□ 1.58
AFF1-205ENST00000504956 MTUS2Q5JR59 1369 aa24.91■■□□□ 1.58
AFF1-205ENST00000504956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.9■■□□□ 1.58
AFF1-205ENST00000504956 APLP2Q06481 763 aa24.89■■□□□ 1.58
AFF1-205ENST00000504956 LRRC9Q6ZRR7 1453 aa24.88■■□□□ 1.57
AFF1-205ENST00000504956 PPRC1Q5VV67 1664 aaKnown RBP24.87■■□□□ 1.57
AFF1-205ENST00000504956 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
AFF1-205ENST00000504956 MYO5CQ9NQX4 1742 aa24.85■■□□□ 1.57
AFF1-205ENST00000504956 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
AFF1-205ENST00000504956 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
AFF1-205ENST00000504956 CD109Q6YHK3 1445 aa24.81■■□□□ 1.56
AFF1-205ENST00000504956 CDC42BPBQ9Y5S2 1711 aa24.77■■□□□ 1.56
AFF1-205ENST00000504956 PREX2Q70Z35 1606 aa24.76■■□□□ 1.55
AFF1-205ENST00000504956 NCOA2Q15596 1464 aa24.75■■□□□ 1.55
AFF1-205ENST00000504956 ITSN2Q9NZM3 1697 aa24.73■■□□□ 1.55
AFF1-205ENST00000504956 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
AFF1-205ENST00000504956 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
AFF1-205ENST00000504956 PLCH2O75038 1416 aa24.69■■□□□ 1.54
AFF1-205ENST00000504956 ARHGAP5Q13017 1502 aa24.69■■□□□ 1.54
AFF1-205ENST00000504956 CFAP74Q9C0B2 1584 aa24.69■■□□□ 1.54
AFF1-205ENST00000504956 CCNB3Q8WWL7 1395 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms