RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
RUFY3-207ENST00000504805 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
RUFY3-207ENST00000504805 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
RUFY3-207ENST00000504805 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
RUFY3-207ENST00000504805 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
RUFY3-207ENST00000504805 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
RUFY3-207ENST00000504805 NUP160Q12769 1436 aa12.44□□□□□ -0.42
RUFY3-207ENST00000504805 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
RUFY3-207ENST00000504805 ERICH3Q5RHP9 1530 aa12.34□□□□□ -0.43
RUFY3-207ENST00000504805 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
RUFY3-207ENST00000504805 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
RUFY3-207ENST00000504805 POTEDQ86YR6 584 aa12.32□□□□□ -0.44
RUFY3-207ENST00000504805 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
RUFY3-207ENST00000504805 DIP2BQ9P265 1576 aa12.28□□□□□ -0.44
RUFY3-207ENST00000504805 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
RUFY3-207ENST00000504805 PRG4Q92954 1404 aaPredicted RBP12.27□□□□□ -0.45
RUFY3-207ENST00000504805 MAPKBP1O60336 1514 aa12.27□□□□□ -0.45
RUFY3-207ENST00000504805 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
RUFY3-207ENST00000504805 MSH5O43196 834 aa12.26□□□□□ -0.45
RUFY3-207ENST00000504805 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
RUFY3-207ENST00000504805 CUL7Q14999 1698 aa12.22□□□□□ -0.45
RUFY3-207ENST00000504805 KDM6BO15054 1643 aa12.19□□□□□ -0.46
RUFY3-207ENST00000504805 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
RUFY3-207ENST00000504805 TSPOAP1O95153 1857 aa12.18□□□□□ -0.46
RUFY3-207ENST00000504805 IGF1RP08069 1367 aa12.17□□□□□ -0.46
RUFY3-207ENST00000504805 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
RUFY3-207ENST00000504805 PPRC1Q5VV67 1664 aaKnown RBP12.14□□□□□ -0.47
RUFY3-207ENST00000504805 KIAA0586Q9BVV6 1533 aa12.13□□□□□ -0.47
RUFY3-207ENST00000504805 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
RUFY3-207ENST00000504805 ZBTB22O15209 634 aa12.12□□□□□ -0.47
RUFY3-207ENST00000504805 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
RUFY3-207ENST00000504805 EEA1Q15075 1411 aa12.11□□□□□ -0.47
RUFY3-207ENST00000504805 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
RUFY3-207ENST00000504805 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
RUFY3-207ENST00000504805 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
RUFY3-207ENST00000504805 RAPGEF2Q9Y4G8 1499 aa12.08□□□□□ -0.47
RUFY3-207ENST00000504805 ABCC2Q92887 1545 aa12.06□□□□□ -0.48
RUFY3-207ENST00000504805 GLI2P10070 1586 aa12.05□□□□□ -0.48
RUFY3-207ENST00000504805 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
RUFY3-207ENST00000504805 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
RUFY3-207ENST00000504805 IQGAP2Q13576 1575 aa12.03□□□□□ -0.48
RUFY3-207ENST00000504805 MAP3K4Q9Y6R4 1608 aa12.02□□□□□ -0.49
RUFY3-207ENST00000504805 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
RUFY3-207ENST00000504805 FAM9AQ8IZU1 332 aaPredicted RBP12.01□□□□□ -0.49
RUFY3-207ENST00000504805 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
RUFY3-207ENST00000504805 ADGRL1O94910 1474 aa12.01□□□□□ -0.49
RUFY3-207ENST00000504805 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
RUFY3-207ENST00000504805 PTPRGP23470 1445 aa12□□□□□ -0.49
RUFY3-207ENST00000504805 TNIKQ9UKE5 1360 aa11.99□□□□□ -0.49
RUFY3-207ENST00000504805 PLB1Q6P1J6 1458 aa11.99□□□□□ -0.49
RUFY3-207ENST00000504805 DISP1Q96F81 1524 aa11.99□□□□□ -0.49
RUFY3-207ENST00000504805 KIF21BO75037 1637 aa11.98□□□□□ -0.49
RUFY3-207ENST00000504805 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
RUFY3-207ENST00000504805 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
RUFY3-207ENST00000504805 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.49
RUFY3-207ENST00000504805 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
RUFY3-207ENST00000504805 CARMIL2Q6F5E8 1435 aa11.96□□□□□ -0.49
RUFY3-207ENST00000504805 HECW2Q9P2P5 1572 aa11.96□□□□□ -0.5
RUFY3-207ENST00000504805 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
RUFY3-207ENST00000504805 UACAQ9BZF9 1416 aa11.94□□□□□ -0.5
RUFY3-207ENST00000504805 UGGT2Q9NYU1 1516 aa11.94□□□□□ -0.5
RUFY3-207ENST00000504805 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
RUFY3-207ENST00000504805 GOLGA3Q08378 1498 aa11.91□□□□□ -0.5
RUFY3-207ENST00000504805 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
RUFY3-207ENST00000504805 RTN4Q9NQC3 1192 aaKnown RBP11.9□□□□□ -0.5
RUFY3-207ENST00000504805 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
RUFY3-207ENST00000504805 CNKSR2Q8WXI2 1034 aa11.89□□□□□ -0.51
RUFY3-207ENST00000504805 WDR7Q9Y4E6 1490 aa11.88□□□□□ -0.51
RUFY3-207ENST00000504805 CFAP43Q8NDM7 1665 aa11.87□□□□□ -0.51
RUFY3-207ENST00000504805 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
RUFY3-207ENST00000504805 ABCA8O94911 1581 aa11.84□□□□□ -0.51
RUFY3-207ENST00000504805 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
RUFY3-207ENST00000504805 MAGI3Q5TCQ9 1506 aa11.83□□□□□ -0.52
RUFY3-207ENST00000504805 SAMD9Q5K651 1589 aa11.83□□□□□ -0.52
RUFY3-207ENST00000504805 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
RUFY3-207ENST00000504805 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
RUFY3-207ENST00000504805 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
RUFY3-207ENST00000504805 CD109Q6YHK3 1445 aa11.77□□□□□ -0.52
RUFY3-207ENST00000504805 ADAMTSL3P82987 1691 aa11.75□□□□□ -0.53
RUFY3-207ENST00000504805 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
RUFY3-207ENST00000504805 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
RUFY3-207ENST00000504805 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
RUFY3-207ENST00000504805 FRMPD1Q5SYB0 1578 aa11.74□□□□□ -0.53
RUFY3-207ENST00000504805 ABCA9Q8IUA7 1624 aa11.74□□□□□ -0.53
RUFY3-207ENST00000504805 ARHGAP35Q9NRY4 1499 aa11.72□□□□□ -0.53
RUFY3-207ENST00000504805 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.53
RUFY3-207ENST00000504805 BCORL1Q5H9F3 1711 aa11.71□□□□□ -0.54
RUFY3-207ENST00000504805 RAPGEF6Q8TEU7 1601 aa11.71□□□□□ -0.54
RUFY3-207ENST00000504805 PTPRMP28827 1452 aa11.69□□□□□ -0.54
RUFY3-207ENST00000504805 CLIP1P30622 1438 aa11.69□□□□□ -0.54
RUFY3-207ENST00000504805 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
RUFY3-207ENST00000504805 MADDQ8WXG6 1647 aa11.68□□□□□ -0.54
RUFY3-207ENST00000504805 ARHGEF40Q8TER5 1519 aa11.67□□□□□ -0.54
RUFY3-207ENST00000504805 ATP10BO94823 1461 aa11.67□□□□□ -0.54
RUFY3-207ENST00000504805 PCF11O94913 1555 aaKnown RBP11.67□□□□□ -0.54
RUFY3-207ENST00000504805 KCNH8Q96L42 1107 aa11.66□□□□□ -0.54
RUFY3-207ENST00000504805 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
RUFY3-207ENST00000504805 RICTORQ6R327 1708 aa11.65□□□□□ -0.54
RUFY3-207ENST00000504805 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
RUFY3-207ENST00000504805 NEO1Q92859 1461 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms