RNA–Protein interactions for RNA: ENST00000504805.6

RUFY3-207, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 5

Gene RUFY3, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-207ENST00000504805 NISCHQ9Y2I1 1504 aa17.41■□□□□ 0.38
RUFY3-207ENST00000504805 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
RUFY3-207ENST00000504805 AEBP2Q6ZN18 517 aaPredicted RBP16.37■□□□□ 0.21
RUFY3-207ENST00000504805 ABCC9O60706 1549 aa15.9■□□□□ 0.14
RUFY3-207ENST00000504805 CCDC180Q9P1Z9 1646 aa15.79■□□□□ 0.12
RUFY3-207ENST00000504805 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
RUFY3-207ENST00000504805 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
RUFY3-207ENST00000504805 NACADO15069 1562 aa14.91□□□□□ -0.02
RUFY3-207ENST00000504805 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
RUFY3-207ENST00000504805 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
RUFY3-207ENST00000504805 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
RUFY3-207ENST00000504805 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
RUFY3-207ENST00000504805 MYO15BQ96JP2 1530 aa14.66□□□□□ -0.06
RUFY3-207ENST00000504805 DCAF8L2P0C7V8 631 aa14.55□□□□□ -0.08
RUFY3-207ENST00000504805 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
RUFY3-207ENST00000504805 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
RUFY3-207ENST00000504805 DCAF1Q9Y4B6 1507 aa14.42□□□□□ -0.1
RUFY3-207ENST00000504805 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
RUFY3-207ENST00000504805 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
RUFY3-207ENST00000504805 SCRIBQ14160 1630 aa14.33□□□□□ -0.11
RUFY3-207ENST00000504805 EIF4G1Q04637 1599 aaKnown RBP14.33□□□□□ -0.12
RUFY3-207ENST00000504805 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
RUFY3-207ENST00000504805 DNAJC5Q9H3Z4 198 aa13.96□□□□□ -0.17
RUFY3-207ENST00000504805 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
RUFY3-207ENST00000504805 CUX2O14529 1486 aa13.82□□□□□ -0.2
RUFY3-207ENST00000504805 NCAPD3P42695 1498 aa13.74□□□□□ -0.21
RUFY3-207ENST00000504805 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
RUFY3-207ENST00000504805 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
RUFY3-207ENST00000504805 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
RUFY3-207ENST00000504805 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
RUFY3-207ENST00000504805 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
RUFY3-207ENST00000504805 NESP48681 1621 aa13.63□□□□□ -0.23
RUFY3-207ENST00000504805 THOC2Q8NI27 1593 aaKnown RBP13.62□□□□□ -0.23
RUFY3-207ENST00000504805 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
RUFY3-207ENST00000504805 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
RUFY3-207ENST00000504805 BAZ1AQ9NRL2 1556 aaPredicted RBP13.53□□□□□ -0.24
RUFY3-207ENST00000504805 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
RUFY3-207ENST00000504805 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
RUFY3-207ENST00000504805 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
RUFY3-207ENST00000504805 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
RUFY3-207ENST00000504805 WDR62O43379 1518 aa13.34□□□□□ -0.27
RUFY3-207ENST00000504805 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
RUFY3-207ENST00000504805 WIZO95785 1651 aa13.28□□□□□ -0.28
RUFY3-207ENST00000504805 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
RUFY3-207ENST00000504805 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
RUFY3-207ENST00000504805 TRIM41Q8WV44 630 aa13.22□□□□□ -0.29
RUFY3-207ENST00000504805 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
RUFY3-207ENST00000504805 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
RUFY3-207ENST00000504805 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
RUFY3-207ENST00000504805 TOP2AP11388 1531 aaKnown RBP13.16□□□□□ -0.3
RUFY3-207ENST00000504805 CFTRP13569 1480 aa13.13□□□□□ -0.31
RUFY3-207ENST00000504805 URB2Q14146 1524 aaKnown RBP13.12□□□□□ -0.31
RUFY3-207ENST00000504805 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
RUFY3-207ENST00000504805 KCNA4P22459 653 aa13.11□□□□□ -0.31
RUFY3-207ENST00000504805 ADRA2BP18089 450 aa13.08□□□□□ -0.32
RUFY3-207ENST00000504805 RIMBP3CA6NJZ7 1639 aa13.05□□□□□ -0.32
RUFY3-207ENST00000504805 RIMBP3BA6NNM3 1639 aa13.05□□□□□ -0.32
RUFY3-207ENST00000504805 RIMBP3Q9UFD9 1639 aa13.05□□□□□ -0.32
RUFY3-207ENST00000504805 FOXD1Q16676 465 aa13.04□□□□□ -0.32
RUFY3-207ENST00000504805 OSCARQ8IYS5 282 aa13□□□□□ -0.33
RUFY3-207ENST00000504805 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
RUFY3-207ENST00000504805 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
RUFY3-207ENST00000504805 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
RUFY3-207ENST00000504805 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
RUFY3-207ENST00000504805 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
RUFY3-207ENST00000504805 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
RUFY3-207ENST00000504805 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
RUFY3-207ENST00000504805 CHD1O14646 1710 aa12.91□□□□□ -0.34
RUFY3-207ENST00000504805 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
RUFY3-207ENST00000504805 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
RUFY3-207ENST00000504805 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
RUFY3-207ENST00000504805 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
RUFY3-207ENST00000504805 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
RUFY3-207ENST00000504805 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■□□ 18.3
RUFY3-207ENST00000504805 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
RUFY3-207ENST00000504805 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
RUFY3-207ENST00000504805 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
RUFY3-207ENST00000504805 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
RUFY3-207ENST00000504805 CSRNP3Q8WYN3 585 aa12.71□□□□□ -0.37
RUFY3-207ENST00000504805 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.38
RUFY3-207ENST00000504805 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
RUFY3-207ENST00000504805 FGD5Q6ZNL6 1462 aa12.65□□□□□ -0.38
RUFY3-207ENST00000504805 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
RUFY3-207ENST00000504805 CUX1P39880 1505 aa12.64□□□□□ -0.39
RUFY3-207ENST00000504805 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
RUFY3-207ENST00000504805 MAGI1Q96QZ7 1491 aaPredicted RBP12.64□□□□□ -0.39
RUFY3-207ENST00000504805 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
RUFY3-207ENST00000504805 SOGA1O94964 1423 aa12.62□□□□□ -0.39
RUFY3-207ENST00000504805 FBLN2P98095 1184 aa12.62□□□□□ -0.39
RUFY3-207ENST00000504805 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
RUFY3-207ENST00000504805 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
RUFY3-207ENST00000504805 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
RUFY3-207ENST00000504805 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
RUFY3-207ENST00000504805 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
RUFY3-207ENST00000504805 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
RUFY3-207ENST00000504805 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
RUFY3-207ENST00000504805 BIVM-ERCC5R4GMW8 1640 aa12.52□□□□□ -0.4
RUFY3-207ENST00000504805 ERCC6L2Q5T890 1561 aa12.52□□□□□ -0.41
RUFY3-207ENST00000504805 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
RUFY3-207ENST00000504805 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms