RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 IGF1RP08069 1367 aa13.54□□□□□ -0.24
MATR3-210ENST00000504643 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.24
MATR3-210ENST00000504643 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
MATR3-210ENST00000504643 CUL7Q14999 1698 aa13.49□□□□□ -0.25
MATR3-210ENST00000504643 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
MATR3-210ENST00000504643 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
MATR3-210ENST00000504643 FAM69CQ0P6D2 419 aa13.44□□□□□ -0.26
MATR3-210ENST00000504643 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
MATR3-210ENST00000504643 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
MATR3-210ENST00000504643 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
MATR3-210ENST00000504643 PTPRGP23470 1445 aa13.41□□□□□ -0.26
MATR3-210ENST00000504643 TNIKQ9UKE5 1360 aa13.39□□□□□ -0.27
MATR3-210ENST00000504643 KIF13AQ9H1H9 1805 aa13.35□□□□□ -0.27
MATR3-210ENST00000504643 ADCY10Q96PN6 1610 aa13.34□□□□□ -0.27
MATR3-210ENST00000504643 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
MATR3-210ENST00000504643 IQGAP2Q13576 1575 aa13.32□□□□□ -0.28
MATR3-210ENST00000504643 DIP2BQ9P265 1576 aa13.32□□□□□ -0.28
MATR3-210ENST00000504643 UHRF1BP1LA0JNW5 1464 aa13.31□□□□□ -0.28
MATR3-210ENST00000504643 PLB1Q6P1J6 1458 aa13.31□□□□□ -0.28
MATR3-210ENST00000504643 ABCC2Q92887 1545 aa13.31□□□□□ -0.28
MATR3-210ENST00000504643 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
MATR3-210ENST00000504643 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
MATR3-210ENST00000504643 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.28
MATR3-210ENST00000504643 UGGT2Q9NYU1 1516 aa13.26□□□□□ -0.29
MATR3-210ENST00000504643 ASXL2Q76L83 1435 aa13.25□□□□□ -0.29
MATR3-210ENST00000504643 GLI2P10070 1586 aa13.24□□□□□ -0.29
MATR3-210ENST00000504643 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
MATR3-210ENST00000504643 KDM6BO15054 1643 aa13.24□□□□□ -0.29
MATR3-210ENST00000504643 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
MATR3-210ENST00000504643 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
MATR3-210ENST00000504643 TEX14Q8IWB6 1497 aa13.19□□□□□ -0.3
MATR3-210ENST00000504643 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
MATR3-210ENST00000504643 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
MATR3-210ENST00000504643 PRXQ9BXM0 1461 aa13.16□□□□□ -0.3
MATR3-210ENST00000504643 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
MATR3-210ENST00000504643 WDR7Q9Y4E6 1490 aa13.13□□□□□ -0.31
MATR3-210ENST00000504643 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
MATR3-210ENST00000504643 CTTNBP2Q8WZ74 1663 aa13.12□□□□□ -0.31
MATR3-210ENST00000504643 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
MATR3-210ENST00000504643 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
MATR3-210ENST00000504643 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
MATR3-210ENST00000504643 EEA1Q15075 1411 aa13.09□□□□□ -0.31
MATR3-210ENST00000504643 ABCA8O94911 1581 aa13.08□□□□□ -0.32
MATR3-210ENST00000504643 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
MATR3-210ENST00000504643 PPRC1Q5VV67 1664 aaKnown RBP13.07□□□□□ -0.32
MATR3-210ENST00000504643 MAGI3Q5TCQ9 1506 aa13.07□□□□□ -0.32
MATR3-210ENST00000504643 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
MATR3-210ENST00000504643 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
MATR3-210ENST00000504643 COL17A1Q9UMD9 1497 aaPredicted RBP13.03□□□□□ -0.32
MATR3-210ENST00000504643 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
MATR3-210ENST00000504643 ADGRL1O94910 1474 aa13□□□□□ -0.33
MATR3-210ENST00000504643 P3H3Q8IVL6 736 aa13□□□□□ -0.33
MATR3-210ENST00000504643 ATP10BO94823 1461 aa12.99□□□□□ -0.33
MATR3-210ENST00000504643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
MATR3-210ENST00000504643 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
MATR3-210ENST00000504643 ARAP3Q8WWN8 1544 aa12.97□□□□□ -0.33
MATR3-210ENST00000504643 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
MATR3-210ENST00000504643 PLEKHD1A6NEE1 506 aa12.95□□□□□ -0.34
MATR3-210ENST00000504643 NEO1Q92859 1461 aa12.93□□□□□ -0.34
MATR3-210ENST00000504643 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
MATR3-210ENST00000504643 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
MATR3-210ENST00000504643 ABCA9Q8IUA7 1624 aa12.92□□□□□ -0.34
MATR3-210ENST00000504643 EFCAB5A4FU69 1503 aa12.9□□□□□ -0.35
MATR3-210ENST00000504643 NUP153P49790 1475 aaKnown RBP12.88□□□□□ -0.35
MATR3-210ENST00000504643 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
MATR3-210ENST00000504643 KIF21BO75037 1637 aa12.86□□□□□ -0.35
MATR3-210ENST00000504643 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
MATR3-210ENST00000504643 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
MATR3-210ENST00000504643 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
MATR3-210ENST00000504643 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
MATR3-210ENST00000504643 DENND4BO75064 1496 aaPredicted RBP12.83□□□□□ -0.36
MATR3-210ENST00000504643 FMN1Q68DA7 1419 aa12.83□□□□□ -0.36
MATR3-210ENST00000504643 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
MATR3-210ENST00000504643 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
MATR3-210ENST00000504643 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
MATR3-210ENST00000504643 HECW2Q9P2P5 1572 aa12.8□□□□□ -0.36
MATR3-210ENST00000504643 FANCAO15360 1455 aa12.79□□□□□ -0.36
MATR3-210ENST00000504643 POGZQ7Z3K3 1410 aa12.79□□□□□ -0.36
MATR3-210ENST00000504643 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
MATR3-210ENST00000504643 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.36
MATR3-210ENST00000504643 CHIC1Q5VXU3 224 aa12.77□□□□□ -0.36
MATR3-210ENST00000504643 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
MATR3-210ENST00000504643 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
MATR3-210ENST00000504643 PLCH2O75038 1416 aa12.76□□□□□ -0.37
MATR3-210ENST00000504643 PTPRMP28827 1452 aa12.76□□□□□ -0.37
MATR3-210ENST00000504643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.377e-32■□□□□ 9.7
MATR3-210ENST00000504643 ADAMTSL3P82987 1691 aa12.75□□□□□ -0.37
MATR3-210ENST00000504643 CLIP1P30622 1438 aa12.73□□□□□ -0.37
MATR3-210ENST00000504643 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
MATR3-210ENST00000504643 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
MATR3-210ENST00000504643 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
MATR3-210ENST00000504643 ARHGEF40Q8TER5 1519 aa12.72□□□□□ -0.37
MATR3-210ENST00000504643 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
MATR3-210ENST00000504643 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.37
MATR3-210ENST00000504643 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.37
MATR3-210ENST00000504643 CDK13Q14004 1512 aaKnown RBP12.7□□□□□ -0.38
MATR3-210ENST00000504643 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
MATR3-210ENST00000504643 ZFYVE16Q7Z3T8 1539 aa12.7□□□□□ -0.38
MATR3-210ENST00000504643 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
MATR3-210ENST00000504643 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms