RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 CTTNBP2Q8WZ74 1663 aa19.44■□□□□ 0.7
MATR3-233ENST00000504203 DIEXFQ68CQ4 756 aaKnown RBP19.43■□□□□ 0.7
MATR3-233ENST00000504203 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
MATR3-233ENST00000504203 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
MATR3-233ENST00000504203 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
MATR3-233ENST00000504203 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
MATR3-233ENST00000504203 CFAP43Q8NDM7 1665 aa19.41■□□□□ 0.7
MATR3-233ENST00000504203 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
MATR3-233ENST00000504203 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
MATR3-233ENST00000504203 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.7
MATR3-233ENST00000504203 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
MATR3-233ENST00000504203 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.692e-7■■■■□ 23.3
MATR3-233ENST00000504203 P3H3Q8IVL6 736 aa19.36■□□□□ 0.69
MATR3-233ENST00000504203 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
MATR3-233ENST00000504203 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
MATR3-233ENST00000504203 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
MATR3-233ENST00000504203 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
MATR3-233ENST00000504203 SAMD9Q5K651 1589 aa19.3■□□□□ 0.68
MATR3-233ENST00000504203 FMN1Q68DA7 1419 aa19.29■□□□□ 0.68
MATR3-233ENST00000504203 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
MATR3-233ENST00000504203 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
MATR3-233ENST00000504203 ITGAEP38570 1179 aa19.23■□□□□ 0.67
MATR3-233ENST00000504203 ATP1B4Q9UN42 357 aaPredicted RBP19.22■□□□□ 0.67
MATR3-233ENST00000504203 RAB3GAP2Q9H2M9 1393 aa19.22■□□□□ 0.67
MATR3-233ENST00000504203 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
MATR3-233ENST00000504203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.665e-19■■□□□ 13.5
MATR3-233ENST00000504203 SETD5Q9C0A6 1442 aa19.18■□□□□ 0.66
MATR3-233ENST00000504203 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
MATR3-233ENST00000504203 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
MATR3-233ENST00000504203 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
MATR3-233ENST00000504203 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
MATR3-233ENST00000504203 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
MATR3-233ENST00000504203 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
MATR3-233ENST00000504203 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
MATR3-233ENST00000504203 WDR62O43379 1518 aa19.12■□□□□ 0.65
MATR3-233ENST00000504203 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
MATR3-233ENST00000504203 FGD6Q6ZV73 1430 aa19.1■□□□□ 0.65
MATR3-233ENST00000504203 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
MATR3-233ENST00000504203 MTUS2Q5JR59 1369 aa19.1■□□□□ 0.65
MATR3-233ENST00000504203 IQGAP2Q13576 1575 aa19.09■□□□□ 0.65
MATR3-233ENST00000504203 NEUROD1Q13562 356 aa19.07■□□□□ 0.64
MATR3-233ENST00000504203 ZNF608Q9ULD9 1512 aaPredicted RBP19.06■□□□□ 0.64
MATR3-233ENST00000504203 EHBP1L1Q8N3D4 1523 aa19.05■□□□□ 0.64
MATR3-233ENST00000504203 MIER1Q8N108 512 aa19.05■□□□□ 0.64
MATR3-233ENST00000504203 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
MATR3-233ENST00000504203 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
MATR3-233ENST00000504203 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
MATR3-233ENST00000504203 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
MATR3-233ENST00000504203 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
MATR3-233ENST00000504203 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.63
MATR3-233ENST00000504203 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.63
MATR3-233ENST00000504203 MAGI3Q5TCQ9 1506 aa19.01■□□□□ 0.63
MATR3-233ENST00000504203 HECW1Q76N89 1606 aa19.01■□□□□ 0.63
MATR3-233ENST00000504203 PTPRKQ15262 1439 aa18.98■□□□□ 0.63
MATR3-233ENST00000504203 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
MATR3-233ENST00000504203 HFM1A2PYH4 1435 aa18.96■□□□□ 0.62
MATR3-233ENST00000504203 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
MATR3-233ENST00000504203 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
MATR3-233ENST00000504203 PTPN23Q9H3S7 1636 aa18.93■□□□□ 0.62
MATR3-233ENST00000504203 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
MATR3-233ENST00000504203 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
MATR3-233ENST00000504203 DISP1Q96F81 1524 aa18.91■□□□□ 0.62
MATR3-233ENST00000504203 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
MATR3-233ENST00000504203 ERCC6Q03468 1493 aa18.9■□□□□ 0.62
MATR3-233ENST00000504203 KIAA0556O60303 1618 aa18.9■□□□□ 0.62
MATR3-233ENST00000504203 SIN3AQ96ST3 1273 aa18.9■□□□□ 0.62
MATR3-233ENST00000504203 CDK13Q14004 1512 aaKnown RBP18.89■□□□□ 0.61
MATR3-233ENST00000504203 NAIPQ13075 1403 aa18.89■□□□□ 0.61
MATR3-233ENST00000504203 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
MATR3-233ENST00000504203 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
MATR3-233ENST00000504203 MIA2Q96PC5 1412 aa18.84■□□□□ 0.61
MATR3-233ENST00000504203 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.6
MATR3-233ENST00000504203 GTF3C3Q9Y5Q9 886 aa18.82■□□□□ 0.6
MATR3-233ENST00000504203 SYNJ2O15056 1496 aa18.81■□□□□ 0.6
MATR3-233ENST00000504203 NUP153P49790 1475 aaKnown RBP18.81■□□□□ 0.6
MATR3-233ENST00000504203 CEP170Q5SW79 1584 aa18.8■□□□□ 0.6
MATR3-233ENST00000504203 AKNAQ7Z591 1439 aa18.8■□□□□ 0.6
MATR3-233ENST00000504203 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
MATR3-233ENST00000504203 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
MATR3-233ENST00000504203 PPP1R15AO75807 674 aaPredicted RBP18.78■□□□□ 0.6
MATR3-233ENST00000504203 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
MATR3-233ENST00000504203 CHMP7Q8WUX9 453 aaPredicted RBP18.75■□□□□ 0.59
MATR3-233ENST00000504203 NUP160Q12769 1436 aa18.74■□□□□ 0.59
MATR3-233ENST00000504203 RRP7BPQ9NSQ0 103 aa18.72■□□□□ 0.59
MATR3-233ENST00000504203 CHIC2Q9UKJ5 165 aa18.7■□□□□ 0.58
MATR3-233ENST00000504203 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
MATR3-233ENST00000504203 KDM6BO15054 1643 aa18.69■□□□□ 0.58
MATR3-233ENST00000504203 DENND4BO75064 1496 aaPredicted RBP18.69■□□□□ 0.58
MATR3-233ENST00000504203 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
MATR3-233ENST00000504203 PLB1Q6P1J6 1458 aa18.67■□□□□ 0.58
MATR3-233ENST00000504203 DAPK1P53355 1430 aa18.67■□□□□ 0.58
MATR3-233ENST00000504203 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
MATR3-233ENST00000504203 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
MATR3-233ENST00000504203 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
MATR3-233ENST00000504203 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
MATR3-233ENST00000504203 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
MATR3-233ENST00000504203 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
MATR3-233ENST00000504203 FBLN2P98095 1184 aa18.65■□□□□ 0.58
MATR3-233ENST00000504203 ABCC5O15440 1437 aa18.64■□□□□ 0.57
MATR3-233ENST00000504203 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms