RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
MED28-203ENST00000503945 IGF1RP08069 1367 aa20.62■□□□□ 0.89
MED28-203ENST00000503945 NPM1P06748 294 aaKnown RBP eCLIP20.62■□□□□ 0.89
MED28-203ENST00000503945 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
MED28-203ENST00000503945 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
MED28-203ENST00000503945 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
MED28-203ENST00000503945 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
MED28-203ENST00000503945 ADCY10Q96PN6 1610 aa20.55■□□□□ 0.88
MED28-203ENST00000503945 MAPKBP1O60336 1514 aa20.52■□□□□ 0.87
MED28-203ENST00000503945 CUL7Q14999 1698 aa20.51■□□□□ 0.87
MED28-203ENST00000503945 DIP2BQ9P265 1576 aa20.48■□□□□ 0.87
MED28-203ENST00000503945 CARMIL1Q5VZK9 1371 aa20.46■□□□□ 0.87
MED28-203ENST00000503945 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
MED28-203ENST00000503945 TSPOAP1O95153 1857 aa20.44■□□□□ 0.86
MED28-203ENST00000503945 PTPRGP23470 1445 aa20.44■□□□□ 0.86
MED28-203ENST00000503945 TNIKQ9UKE5 1360 aa20.37■□□□□ 0.85
MED28-203ENST00000503945 CARMIL2Q6F5E8 1435 aa20.36■□□□□ 0.85
MED28-203ENST00000503945 KDM6BO15054 1643 aa20.35■□□□□ 0.85
MED28-203ENST00000503945 KDM4FA0A1W2PPD8 638 aa20.33■□□□□ 0.85
MED28-203ENST00000503945 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
MED28-203ENST00000503945 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
MED28-203ENST00000503945 ASXL2Q76L83 1435 aa20.28■□□□□ 0.84
MED28-203ENST00000503945 DISP1Q96F81 1524 aa20.27■□□□□ 0.83
MED28-203ENST00000503945 UACAQ9BZF9 1416 aa20.27■□□□□ 0.83
MED28-203ENST00000503945 UHRF1BP1LA0JNW5 1464 aa20.25■□□□□ 0.83
MED28-203ENST00000503945 PLB1Q6P1J6 1458 aa20.25■□□□□ 0.83
MED28-203ENST00000503945 PPRC1Q5VV67 1664 aaKnown RBP20.23■□□□□ 0.83
MED28-203ENST00000503945 GLI2P10070 1586 aa20.23■□□□□ 0.83
MED28-203ENST00000503945 RAPGEF2Q9Y4G8 1499 aa20.23■□□□□ 0.83
MED28-203ENST00000503945 UGGT2Q9NYU1 1516 aa20.19■□□□□ 0.82
MED28-203ENST00000503945 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
MED28-203ENST00000503945 EPRSP07814 1512 aaKnown RBP20.16■□□□□ 0.82
MED28-203ENST00000503945 KIAA0556O60303 1618 aa20.14■□□□□ 0.81
MED28-203ENST00000503945 ZCCHC11Q5TAX3 1644 aaKnown RBP20.14■□□□□ 0.81
MED28-203ENST00000503945 COL17A1Q9UMD9 1497 aaPredicted RBP20.14■□□□□ 0.81
MED28-203ENST00000503945 MAP3K4Q9Y6R4 1608 aa20.12■□□□□ 0.81
MED28-203ENST00000503945 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
MED28-203ENST00000503945 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
MED28-203ENST00000503945 CTTNBP2Q8WZ74 1663 aa20.06■□□□□ 0.8
MED28-203ENST00000503945 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
MED28-203ENST00000503945 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
MED28-203ENST00000503945 KCNH8Q96L42 1107 aa20.03■□□□□ 0.8
MED28-203ENST00000503945 WDR7Q9Y4E6 1490 aa20.03■□□□□ 0.8
MED28-203ENST00000503945 GOLGA3Q08378 1498 aa20■□□□□ 0.79
MED28-203ENST00000503945 PRXQ9BXM0 1461 aa20■□□□□ 0.79
MED28-203ENST00000503945 ABCA8O94911 1581 aa19.99■□□□□ 0.79
MED28-203ENST00000503945 CD109Q6YHK3 1445 aa19.97■□□□□ 0.79
MED28-203ENST00000503945 P3H3Q8IVL6 736 aa19.94■□□□□ 0.78
MED28-203ENST00000503945 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
MED28-203ENST00000503945 MAGI3Q5TCQ9 1506 aa19.93■□□□□ 0.78
MED28-203ENST00000503945 ARID3CA6NKF2 412 aa19.9■□□□□ 0.78
MED28-203ENST00000503945 EEA1Q15075 1411 aa19.89■□□□□ 0.77
MED28-203ENST00000503945 ILDR1Q86SU0 546 aaPredicted RBP19.89■□□□□ 0.77
MED28-203ENST00000503945 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
MED28-203ENST00000503945 ATP10BO94823 1461 aa19.86■□□□□ 0.77
MED28-203ENST00000503945 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
MED28-203ENST00000503945 HECW2Q9P2P5 1572 aa19.82■□□□□ 0.76
MED28-203ENST00000503945 ARAP3Q8WWN8 1544 aa19.79■□□□□ 0.76
MED28-203ENST00000503945 KIF21BO75037 1637 aa19.77■□□□□ 0.76
MED28-203ENST00000503945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
MED28-203ENST00000503945 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
MED28-203ENST00000503945 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
MED28-203ENST00000503945 SAMD9Q5K651 1589 aa19.75■□□□□ 0.75
MED28-203ENST00000503945 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
MED28-203ENST00000503945 EHMT2Q96KQ7 1210 aa19.74■□□□□ 0.75
MED28-203ENST00000503945 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
MED28-203ENST00000503945 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
MED28-203ENST00000503945 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
MED28-203ENST00000503945 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
MED28-203ENST00000503945 NEO1Q92859 1461 aa19.66■□□□□ 0.74
MED28-203ENST00000503945 FHOD3Q2V2M9 1422 aa19.65■□□□□ 0.74
MED28-203ENST00000503945 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
MED28-203ENST00000503945 ADAMTSL3P82987 1691 aa19.64■□□□□ 0.73
MED28-203ENST00000503945 PTPRMP28827 1452 aa19.61■□□□□ 0.73
MED28-203ENST00000503945 ARID4BQ4LE39 1312 aaPredicted RBP19.6■□□□□ 0.73
MED28-203ENST00000503945 FRMPD1Q5SYB0 1578 aa19.6■□□□□ 0.73
MED28-203ENST00000503945 ATP1B4Q9UN42 357 aaPredicted RBP19.58■□□□□ 0.72
MED28-203ENST00000503945 BCORL1Q5H9F3 1711 aa19.57■□□□□ 0.72
MED28-203ENST00000503945 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
MED28-203ENST00000503945 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
MED28-203ENST00000503945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.53■□□□□ 0.72
MED28-203ENST00000503945 RICTORQ6R327 1708 aa19.53■□□□□ 0.72
MED28-203ENST00000503945 MADDQ8WXG6 1647 aa19.52■□□□□ 0.72
MED28-203ENST00000503945 FANCAO15360 1455 aa19.51■□□□□ 0.71
MED28-203ENST00000503945 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
MED28-203ENST00000503945 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
MED28-203ENST00000503945 TTC37Q6PGP7 1564 aa19.48■□□□□ 0.71
MED28-203ENST00000503945 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
MED28-203ENST00000503945 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
MED28-203ENST00000503945 ARHGEF40Q8TER5 1519 aa19.46■□□□□ 0.71
MED28-203ENST00000503945 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
MED28-203ENST00000503945 FBXO41Q8TF61 875 aa19.46■□□□□ 0.71
MED28-203ENST00000503945 FMN1Q68DA7 1419 aa19.45■□□□□ 0.7
MED28-203ENST00000503945 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
MED28-203ENST00000503945 YEATS2Q9ULM3 1422 aa19.43■□□□□ 0.7
MED28-203ENST00000503945 SIGLEC1Q9BZZ2 1709 aa19.43■□□□□ 0.7
MED28-203ENST00000503945 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
MED28-203ENST00000503945 LMTK3Q96Q04 1460 aa19.42■□□□□ 0.7
MED28-203ENST00000503945 PLCH2O75038 1416 aa19.42■□□□□ 0.7
MED28-203ENST00000503945 SCAPERQ9BY12 1400 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms