RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 NEFMP07197 916 aa20.11■□□□□ 0.81
C4A-259ENST00000498271 WIZO95785 1651 aa20.11■□□□□ 0.81
C4A-259ENST00000498271 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
C4A-259ENST00000498271 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.1■□□□□ 0.81
C4A-259ENST00000498271 STAG3Q9UJ98 1225 aa20.1■□□□□ 0.81
C4A-259ENST00000498271 FAM9BQ8IZU0 186 aa20.09■□□□□ 0.81
C4A-259ENST00000498271 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
C4A-259ENST00000498271 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
C4A-259ENST00000498271 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
C4A-259ENST00000498271 PPM1GO15355 546 aaPredicted RBP20.03■□□□□ 0.8
C4A-259ENST00000498271 BCL11AQ9H165 835 aa20.01■□□□□ 0.79
C4A-259ENST00000498271 ERICH6BQ5W0A0 696 aa20.01■□□□□ 0.79
C4A-259ENST00000498271 TSPY4P0CV99 314 aa20■□□□□ 0.79
C4A-259ENST00000498271 TSPY10P0CW01 314 aa20■□□□□ 0.79
C4A-259ENST00000498271 VPS8Q8N3P4 1428 aa20■□□□□ 0.79
C4A-259ENST00000498271 EIF4G2P78344 907 aaKnown RBP eCLIP19.97■□□□□ 0.79
C4A-259ENST00000498271 CCNB3Q8WWL7 1395 aa19.96■□□□□ 0.79
C4A-259ENST00000498271 BECN1Q14457 450 aa19.96■□□□□ 0.79
C4A-259ENST00000498271 TMC1Q8TDI8 760 aa19.96■□□□□ 0.79
C4A-259ENST00000498271 MRS2Q9HD23 443 aa19.96■□□□□ 0.79
C4A-259ENST00000498271 CUX2O14529 1486 aa19.96■□□□□ 0.79
C4A-259ENST00000498271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.79
C4A-259ENST00000498271 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
C4A-259ENST00000498271 CARMIL1Q5VZK9 1371 aa19.94■□□□□ 0.78
C4A-259ENST00000498271 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
C4A-259ENST00000498271 TRIM44Q96DX7 344 aaPredicted RBP19.92■□□□□ 0.78
C4A-259ENST00000498271 TNNT2P45379 298 aaPredicted RBP19.92■□□□□ 0.78
C4A-259ENST00000498271 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
C4A-259ENST00000498271 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
C4A-259ENST00000498271 SUPT16HQ9Y5B9 1047 aaKnown RBP19.89■□□□□ 0.77
C4A-259ENST00000498271 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
C4A-259ENST00000498271 NOP58Q9Y2X3 529 aaKnown RBP19.86■□□□□ 0.77
C4A-259ENST00000498271 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
C4A-259ENST00000498271 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
C4A-259ENST00000498271 PPP4R2Q9NY27 417 aa19.85■□□□□ 0.77
C4A-259ENST00000498271 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
C4A-259ENST00000498271 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
C4A-259ENST00000498271 PLEKHD1A6NEE1 506 aa19.83■□□□□ 0.77
C4A-259ENST00000498271 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
C4A-259ENST00000498271 CFDP1Q9UEE9 299 aaPredicted RBP19.81■□□□□ 0.76
C4A-259ENST00000498271 GOLGA6L22H0YM25 854 aa19.79■□□□□ 0.76
C4A-259ENST00000498271 ARXQ96QS3 562 aa19.79■□□□□ 0.76
C4A-259ENST00000498271 PLPPR3Q6T4P5 718 aa19.79■□□□□ 0.76
C4A-259ENST00000498271 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.75
C4A-259ENST00000498271 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
C4A-259ENST00000498271 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
C4A-259ENST00000498271 DEKP35659 375 aaKnown RBP19.72■□□□□ 0.75
C4A-259ENST00000498271 TRHP20396 242 aaPredicted RBP19.72■□□□□ 0.75
C4A-259ENST00000498271 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
C4A-259ENST00000498271 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
C4A-259ENST00000498271 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
C4A-259ENST00000498271 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
C4A-259ENST00000498271 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
C4A-259ENST00000498271 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
C4A-259ENST00000498271 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
C4A-259ENST00000498271 NAP1L5Q96NT1 182 aaPredicted RBP19.7■□□□□ 0.74
C4A-259ENST00000498271 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
C4A-259ENST00000498271 RGL3Q3MIN7 710 aa19.67■□□□□ 0.74
C4A-259ENST00000498271 RBM19Q9Y4C8 960 aaKnown RBP19.66■□□□□ 0.74
C4A-259ENST00000498271 ARID4BQ4LE39 1312 aaPredicted RBP19.65■□□□□ 0.74
C4A-259ENST00000498271 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
C4A-259ENST00000498271 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
C4A-259ENST00000498271 RTN4Q9NQC3 1192 aaKnown RBP19.61■□□□□ 0.73
C4A-259ENST00000498271 L1TD1Q5T7N2 865 aaKnown RBP19.61■□□□□ 0.73
C4A-259ENST00000498271 MYH16Q9H6N6 1097 aa19.6■□□□□ 0.73
C4A-259ENST00000498271 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
C4A-259ENST00000498271 CCER2I3L3R5 266 aa19.58■□□□□ 0.73
C4A-259ENST00000498271 LAS1LQ9Y4W2 734 aaKnown RBP19.58■□□□□ 0.73
C4A-259ENST00000498271 FMN1Q68DA7 1419 aa19.58■□□□□ 0.72
C4A-259ENST00000498271 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
C4A-259ENST00000498271 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
C4A-259ENST00000498271 C14orf37Q86TY3 774 aa19.55■□□□□ 0.72
C4A-259ENST00000498271 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
C4A-259ENST00000498271 PPP1R15AO75807 674 aaPredicted RBP19.54■□□□□ 0.72
C4A-259ENST00000498271 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
C4A-259ENST00000498271 DNTTIP2Q5QJE6 756 aaKnown RBP19.51■□□□□ 0.71
C4A-259ENST00000498271 FHOD3Q2V2M9 1422 aa19.5■□□□□ 0.71
C4A-259ENST00000498271 TSHZ2Q9NRE2 1034 aa19.48■□□□□ 0.71
C4A-259ENST00000498271 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
C4A-259ENST00000498271 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
C4A-259ENST00000498271 CDK11BP21127 795 aaKnown RBP19.46■□□□□ 0.71
C4A-259ENST00000498271 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
C4A-259ENST00000498271 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
C4A-259ENST00000498271 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
C4A-259ENST00000498271 FOXD1Q16676 465 aa19.44■□□□□ 0.7
C4A-259ENST00000498271 B4GALNT3Q6L9W6 998 aa19.42■□□□□ 0.7
C4A-259ENST00000498271 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
C4A-259ENST00000498271 MPHOSPH9Q99550 1183 aa19.41■□□□□ 0.7
C4A-259ENST00000498271 HDGFP51858 240 aaKnown RBP19.4■□□□□ 0.7
C4A-259ENST00000498271 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
C4A-259ENST00000498271 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
C4A-259ENST00000498271 PKD2Q13563 968 aa19.38■□□□□ 0.69
C4A-259ENST00000498271 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
C4A-259ENST00000498271 CARMIL2Q6F5E8 1435 aa19.36■□□□□ 0.69
C4A-259ENST00000498271 PTMSP20962 102 aa19.35■□□□□ 0.69
C4A-259ENST00000498271 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
C4A-259ENST00000498271 CC2D1BQ5T0F9 858 aaKnown RBP19.34■□□□□ 0.69
C4A-259ENST00000498271 MS4A1P11836 297 aa19.34■□□□□ 0.69
C4A-259ENST00000498271 CHMP4BQ9H444 224 aaKnown RBP19.33■□□□□ 0.69
C4A-259ENST00000498271 CHAF1AQ13111 956 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms