RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
C4A-259ENST00000498271 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
C4A-259ENST00000498271 MT1EP04732 61 aa4.87□□□□□ -1.63
C4A-259ENST00000498271 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
C4A-259ENST00000498271 UBR4Q5T4S7 5183 aa4.81□□□□□ -1.64
C4A-259ENST00000498271 MUC2Q02817 5179 aa4.77□□□□□ -1.65
C4A-259ENST00000498271 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
C4A-259ENST00000498271 LCE2AQ5TA79 106 aaPredicted RBP4.74□□□□□ -1.65
C4A-259ENST00000498271 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
C4A-259ENST00000498271 MT1MQ8N339 61 aa4.67□□□□□ -1.66
C4A-259ENST00000498271 MT3P25713 68 aa4.67□□□□□ -1.66
C4A-259ENST00000498271 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
C4A-259ENST00000498271 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
C4A-259ENST00000498271 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
C4A-259ENST00000498271 PRM1P04553 51 aa4.65□□□□□ -1.66
C4A-259ENST00000498271 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
C4A-259ENST00000498271 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
C4A-259ENST00000498271 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
C4A-259ENST00000498271 MT4P47944 62 aa4.6□□□□□ -1.67
C4A-259ENST00000498271 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
C4A-259ENST00000498271 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
C4A-259ENST00000498271 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
C4A-259ENST00000498271 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
C4A-259ENST00000498271 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
C4A-259ENST00000498271 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
C4A-259ENST00000498271 MT1AP04731 61 aa4.34□□□□□ -1.71
C4A-259ENST00000498271 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
C4A-259ENST00000498271 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
C4A-259ENST00000498271 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
C4A-259ENST00000498271 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
C4A-259ENST00000498271 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
C4A-259ENST00000498271 USH2AO75445 5202 aa4.19□□□□□ -1.74
C4A-259ENST00000498271 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
C4A-259ENST00000498271 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
C4A-259ENST00000498271 KMT2DO14686 5537 aa4.12□□□□□ -1.75
C4A-259ENST00000498271 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
C4A-259ENST00000498271 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
C4A-259ENST00000498271 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
C4A-259ENST00000498271 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
C4A-259ENST00000498271 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
C4A-259ENST00000498271 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
C4A-259ENST00000498271 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
C4A-259ENST00000498271 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
C4A-259ENST00000498271 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
C4A-259ENST00000498271 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
C4A-259ENST00000498271 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
C4A-259ENST00000498271 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
C4A-259ENST00000498271 NEBP20929 6669 aa3.8□□□□□ -1.8
C4A-259ENST00000498271 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
C4A-259ENST00000498271 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
C4A-259ENST00000498271 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
C4A-259ENST00000498271 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
C4A-259ENST00000498271 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
C4A-259ENST00000498271 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
C4A-259ENST00000498271 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
C4A-259ENST00000498271 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
C4A-259ENST00000498271 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
C4A-259ENST00000498271 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
C4A-259ENST00000498271 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
C4A-259ENST00000498271 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
C4A-259ENST00000498271 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
C4A-259ENST00000498271 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
C4A-259ENST00000498271 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
C4A-259ENST00000498271 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
C4A-259ENST00000498271 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
C4A-259ENST00000498271 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
C4A-259ENST00000498271 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
C4A-259ENST00000498271 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
C4A-259ENST00000498271 PHGR1C9JFL3 82 aa2.54□□□□□ -2
C4A-259ENST00000498271 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
C4A-259ENST00000498271 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
C4A-259ENST00000498271 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
C4A-259ENST00000498271 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
C4A-259ENST00000498271 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
C4A-259ENST00000498271 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
C4A-259ENST00000498271 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
C4A-259ENST00000498271 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms