RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 FBLN2P98095 1184 aa17.93■□□□□ 0.46
CCDC142-209ENST00000497232 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
CCDC142-209ENST00000497232 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
CCDC142-209ENST00000497232 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
CCDC142-209ENST00000497232 CTTNBP2Q8WZ74 1663 aa17.88■□□□□ 0.45
CCDC142-209ENST00000497232 OSCARQ8IYS5 282 aa17.86■□□□□ 0.45
CCDC142-209ENST00000497232 SHROOM2Q13796 1616 aa17.85■□□□□ 0.45
CCDC142-209ENST00000497232 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
CCDC142-209ENST00000497232 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
CCDC142-209ENST00000497232 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
CCDC142-209ENST00000497232 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
CCDC142-209ENST00000497232 JPH4Q96JJ6 628 aa17.78■□□□□ 0.44
CCDC142-209ENST00000497232 DISP1Q96F81 1524 aa17.77■□□□□ 0.43
CCDC142-209ENST00000497232 SAMD9Q5K651 1589 aa17.76■□□□□ 0.43
CCDC142-209ENST00000497232 FOXD1Q16676 465 aa17.73■□□□□ 0.43
CCDC142-209ENST00000497232 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
CCDC142-209ENST00000497232 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
CCDC142-209ENST00000497232 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
CCDC142-209ENST00000497232 PRG4Q92954 1404 aaPredicted RBP17.7■□□□□ 0.42
CCDC142-209ENST00000497232 KIAA0556O60303 1618 aa17.69■□□□□ 0.42
CCDC142-209ENST00000497232 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
CCDC142-209ENST00000497232 CLIP1P30622 1438 aa17.69■□□□□ 0.42
CCDC142-209ENST00000497232 ARAP1Q96P48 1450 aa17.66■□□□□ 0.42
CCDC142-209ENST00000497232 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
CCDC142-209ENST00000497232 FHOD3Q2V2M9 1422 aa17.61■□□□□ 0.41
CCDC142-209ENST00000497232 CARMIL2Q6F5E8 1435 aa17.61■□□□□ 0.41
CCDC142-209ENST00000497232 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
CCDC142-209ENST00000497232 P3H3Q8IVL6 736 aa17.58■□□□□ 0.4
CCDC142-209ENST00000497232 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.4
CCDC142-209ENST00000497232 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.4
CCDC142-209ENST00000497232 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.4
CCDC142-209ENST00000497232 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
CCDC142-209ENST00000497232 PTPRGP23470 1445 aa17.53■□□□□ 0.4
CCDC142-209ENST00000497232 ABCA8O94911 1581 aa17.52■□□□□ 0.39
CCDC142-209ENST00000497232 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
CCDC142-209ENST00000497232 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
CCDC142-209ENST00000497232 PLB1Q6P1J6 1458 aa17.48■□□□□ 0.39
CCDC142-209ENST00000497232 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
CCDC142-209ENST00000497232 CASKIN1Q8WXD9 1431 aa17.46■□□□□ 0.39
CCDC142-209ENST00000497232 UACAQ9BZF9 1416 aa17.45■□□□□ 0.38
CCDC142-209ENST00000497232 PCF11O94913 1555 aaKnown RBP17.45■□□□□ 0.38
CCDC142-209ENST00000497232 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
CCDC142-209ENST00000497232 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
CCDC142-209ENST00000497232 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
CCDC142-209ENST00000497232 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
CCDC142-209ENST00000497232 ABCC2Q92887 1545 aa17.42■□□□□ 0.38
CCDC142-209ENST00000497232 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
CCDC142-209ENST00000497232 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
CCDC142-209ENST00000497232 TTBK1Q5TCY1 1321 aaPredicted RBP17.38■□□□□ 0.37
CCDC142-209ENST00000497232 KDM5BQ9UGL1 1544 aa17.37■□□□□ 0.37
CCDC142-209ENST00000497232 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
CCDC142-209ENST00000497232 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
CCDC142-209ENST00000497232 ATP10BO94823 1461 aa17.36■□□□□ 0.37
CCDC142-209ENST00000497232 EPRSP07814 1512 aaKnown RBP17.36■□□□□ 0.37
CCDC142-209ENST00000497232 MAP3K1Q13233 1512 aa17.33■□□□□ 0.37
CCDC142-209ENST00000497232 CDK13Q14004 1512 aaKnown RBP17.31■□□□□ 0.36
CCDC142-209ENST00000497232 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
CCDC142-209ENST00000497232 CCDC18Q5T9S5 1454 aa17.29■□□□□ 0.36
CCDC142-209ENST00000497232 CFAP43Q8NDM7 1665 aa17.29■□□□□ 0.36
CCDC142-209ENST00000497232 TIAM1Q13009 1591 aa17.28■□□□□ 0.36
CCDC142-209ENST00000497232 MAGI3Q5TCQ9 1506 aa17.28■□□□□ 0.36
CCDC142-209ENST00000497232 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
CCDC142-209ENST00000497232 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
CCDC142-209ENST00000497232 KANK4Q5T7N3 995 aaPredicted RBP17.22■□□□□ 0.35
CCDC142-209ENST00000497232 LRRC9Q6ZRR7 1453 aa17.21■□□□□ 0.35
CCDC142-209ENST00000497232 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
CCDC142-209ENST00000497232 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
CCDC142-209ENST00000497232 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
CCDC142-209ENST00000497232 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
CCDC142-209ENST00000497232 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
CCDC142-209ENST00000497232 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
CCDC142-209ENST00000497232 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC142-209ENST00000497232 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
CCDC142-209ENST00000497232 KIF14Q15058 1648 aa17.12■□□□□ 0.33
CCDC142-209ENST00000497232 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
CCDC142-209ENST00000497232 MTUS2Q5JR59 1369 aa17.11■□□□□ 0.33
CCDC142-209ENST00000497232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
CCDC142-209ENST00000497232 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
CCDC142-209ENST00000497232 APLP2Q06481 763 aa17.09■□□□□ 0.33
CCDC142-209ENST00000497232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC142-209ENST00000497232 NCOA2Q15596 1464 aa17.08■□□□□ 0.32
CCDC142-209ENST00000497232 GLI2P10070 1586 aa17.07■□□□□ 0.32
CCDC142-209ENST00000497232 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
CCDC142-209ENST00000497232 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
CCDC142-209ENST00000497232 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
CCDC142-209ENST00000497232 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
CCDC142-209ENST00000497232 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
CCDC142-209ENST00000497232 PHLDB1Q86UU1 1377 aa17.04■□□□□ 0.32
CCDC142-209ENST00000497232 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
CCDC142-209ENST00000497232 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
CCDC142-209ENST00000497232 KIF13AQ9H1H9 1805 aa17.02■□□□□ 0.31
CCDC142-209ENST00000497232 MAP3K4Q9Y6R4 1608 aa17■□□□□ 0.31
CCDC142-209ENST00000497232 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
CCDC142-209ENST00000497232 PLCH2O75038 1416 aa16.98■□□□□ 0.31
CCDC142-209ENST00000497232 ARAP3Q8WWN8 1544 aa16.98■□□□□ 0.31
CCDC142-209ENST00000497232 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
CCDC142-209ENST00000497232 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
CCDC142-209ENST00000497232 PREX2Q70Z35 1606 aa16.96■□□□□ 0.31
CCDC142-209ENST00000497232 PPRC1Q5VV67 1664 aaKnown RBP16.96■□□□□ 0.31
CCDC142-209ENST00000497232 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms