RNA–Protein interactions for RNA: ENST00000496559.6

LRIG1-207, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 2

Gene LRIG1, Length 4,129 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-207ENST00000496559 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
LRIG1-207ENST00000496559 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
LRIG1-207ENST00000496559 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
LRIG1-207ENST00000496559 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
LRIG1-207ENST00000496559 AQRO60306 1485 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRIG1-207ENST00000496559 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
LRIG1-207ENST00000496559 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
LRIG1-207ENST00000496559 SENP3Q9H4L4 574 aaPredicted RBP12.6□□□□□ -0.39
LRIG1-207ENST00000496559 CFTRP13569 1480 aa12.58□□□□□ -0.39
LRIG1-207ENST00000496559 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
LRIG1-207ENST00000496559 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
LRIG1-207ENST00000496559 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
LRIG1-207ENST00000496559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRIG1-207ENST00000496559 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
LRIG1-207ENST00000496559 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
LRIG1-207ENST00000496559 IGF1RP08069 1367 aa12.54□□□□□ -0.4
LRIG1-207ENST00000496559 JPH4Q96JJ6 628 aa12.52□□□□□ -0.4
LRIG1-207ENST00000496559 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
LRIG1-207ENST00000496559 HMGXB3Q12766 1538 aa12.51□□□□□ -0.41
LRIG1-207ENST00000496559 CUX1P39880 1505 aa12.47□□□□□ -0.41
LRIG1-207ENST00000496559 GAPVD1Q14C86 1478 aa12.47□□□□□ -0.41
LRIG1-207ENST00000496559 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
LRIG1-207ENST00000496559 CFDP1Q9UEE9 299 aaPredicted RBP12.47□□□□□ -0.41
LRIG1-207ENST00000496559 TSPY4P0CV99 314 aa12.45□□□□□ -0.42
LRIG1-207ENST00000496559 TSPY10P0CW01 314 aa12.45□□□□□ -0.42
LRIG1-207ENST00000496559 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
LRIG1-207ENST00000496559 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
LRIG1-207ENST00000496559 GLIPR1L2Q4G1C9 344 aa12.44□□□□□ -0.42
LRIG1-207ENST00000496559 POLA1P09884 1462 aaPredicted RBP12.43□□□□□ -0.42
LRIG1-207ENST00000496559 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
LRIG1-207ENST00000496559 SLC4A1APQ9BWU0 796 aaKnown RBP12.43□□□□□ -0.42
LRIG1-207ENST00000496559 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
LRIG1-207ENST00000496559 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
LRIG1-207ENST00000496559 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
LRIG1-207ENST00000496559 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
LRIG1-207ENST00000496559 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
LRIG1-207ENST00000496559 PEG3Q9GZU2 1588 aa12.36□□□□□ -0.43
LRIG1-207ENST00000496559 BCANQ96GW7 911 aa12.36□□□□□ -0.43
LRIG1-207ENST00000496559 MRC2Q9UBG0 1479 aa12.35□□□□□ -0.43
LRIG1-207ENST00000496559 ANP32CO43423 234 aa12.34□□□□□ -0.43
LRIG1-207ENST00000496559 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
LRIG1-207ENST00000496559 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
LRIG1-207ENST00000496559 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
LRIG1-207ENST00000496559 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
LRIG1-207ENST00000496559 FOXD1Q16676 465 aa12.33□□□□□ -0.44
LRIG1-207ENST00000496559 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
LRIG1-207ENST00000496559 MLECQ14165 292 aa12.32□□□□□ -0.44
LRIG1-207ENST00000496559 CARMIL2Q6F5E8 1435 aa12.32□□□□□ -0.44
LRIG1-207ENST00000496559 ESF1Q9H501 851 aaKnown RBP12.31□□□□□ -0.44
LRIG1-207ENST00000496559 TOP2BQ02880 1626 aa12.3□□□□□ -0.44
LRIG1-207ENST00000496559 RTL5Q5HYW3 569 aaPredicted RBP12.3□□□□□ -0.44
LRIG1-207ENST00000496559 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
LRIG1-207ENST00000496559 HNRNPMP52272 730 aaKnown RBP eCLIP12.29□□□□□ -0.44
LRIG1-207ENST00000496559 ARID4BQ4LE39 1312 aaPredicted RBP12.28□□□□□ -0.44
LRIG1-207ENST00000496559 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
LRIG1-207ENST00000496559 PTPRGP23470 1445 aa12.27□□□□□ -0.45
LRIG1-207ENST00000496559 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
LRIG1-207ENST00000496559 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
LRIG1-207ENST00000496559 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
LRIG1-207ENST00000496559 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
LRIG1-207ENST00000496559 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
LRIG1-207ENST00000496559 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
LRIG1-207ENST00000496559 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
LRIG1-207ENST00000496559 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
LRIG1-207ENST00000496559 GGT6Q6P531 493 aa12.22□□□□□ -0.45
LRIG1-207ENST00000496559 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
LRIG1-207ENST00000496559 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
LRIG1-207ENST00000496559 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
LRIG1-207ENST00000496559 DDX10Q13206 875 aaKnown RBP12.19□□□□□ -0.46
LRIG1-207ENST00000496559 MIER1Q8N108 512 aa12.19□□□□□ -0.46
LRIG1-207ENST00000496559 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
LRIG1-207ENST00000496559 PRG4Q92954 1404 aaPredicted RBP12.18□□□□□ -0.46
LRIG1-207ENST00000496559 KIF21BO75037 1637 aa12.17□□□□□ -0.46
LRIG1-207ENST00000496559 ABCA10Q8WWZ4 1543 aa12.16□□□□□ -0.46
LRIG1-207ENST00000496559 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
LRIG1-207ENST00000496559 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
LRIG1-207ENST00000496559 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
LRIG1-207ENST00000496559 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
LRIG1-207ENST00000496559 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
LRIG1-207ENST00000496559 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
LRIG1-207ENST00000496559 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
LRIG1-207ENST00000496559 KIF21AQ7Z4S6 1674 aa12.11□□□□□ -0.47
LRIG1-207ENST00000496559 KIF3BO15066 747 aa12.1□□□□□ -0.47
LRIG1-207ENST00000496559 PKD2Q13563 968 aa12.1□□□□□ -0.47
LRIG1-207ENST00000496559 PKNOX2Q96KN3 472 aa12.09□□□□□ -0.47
LRIG1-207ENST00000496559 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
LRIG1-207ENST00000496559 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
LRIG1-207ENST00000496559 AFAP1Q8N556 730 aa12.09□□□□□ -0.47
LRIG1-207ENST00000496559 ANO8Q9HCE9 1232 aaPredicted RBP12.06□□□□□ -0.48
LRIG1-207ENST00000496559 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
LRIG1-207ENST00000496559 FKBP8Q14318 412 aa12.05□□□□□ -0.48
LRIG1-207ENST00000496559 NUP155O75694 1391 aa12.05□□□□□ -0.48
LRIG1-207ENST00000496559 PLB1Q6P1J6 1458 aa12.04□□□□□ -0.48
LRIG1-207ENST00000496559 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
LRIG1-207ENST00000496559 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
LRIG1-207ENST00000496559 SPAG9O60271 1321 aaKnown RBP12.04□□□□□ -0.48
LRIG1-207ENST00000496559 ERICH3Q5RHP9 1530 aa12.04□□□□□ -0.48
LRIG1-207ENST00000496559 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
LRIG1-207ENST00000496559 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
LRIG1-207ENST00000496559 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms