RNA–Protein interactions for RNA: ENST00000496559.6

LRIG1-207, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 2

Gene LRIG1, Length 4,129 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-207ENST00000496559 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
LRIG1-207ENST00000496559 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
LRIG1-207ENST00000496559 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
LRIG1-207ENST00000496559 SUPT5HO00267 1087 aaKnown RBP15.39■□□□□ 0.05
LRIG1-207ENST00000496559 ABCC9O60706 1549 aa14.96□□□□□ -0.02
LRIG1-207ENST00000496559 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
LRIG1-207ENST00000496559 MYT1Q01538 1121 aa14.92□□□□□ -0.02
LRIG1-207ENST00000496559 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.04
LRIG1-207ENST00000496559 PABPN1Q86U42 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
LRIG1-207ENST00000496559 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
LRIG1-207ENST00000496559 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
LRIG1-207ENST00000496559 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
LRIG1-207ENST00000496559 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
LRIG1-207ENST00000496559 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
LRIG1-207ENST00000496559 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
LRIG1-207ENST00000496559 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
LRIG1-207ENST00000496559 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
LRIG1-207ENST00000496559 LOC105371045A0A1W2PR82 267 aa13.91□□□□□ -0.18
LRIG1-207ENST00000496559 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
LRIG1-207ENST00000496559 UBTFP17480 764 aaKnown RBP13.84□□□□□ -0.19
LRIG1-207ENST00000496559 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
LRIG1-207ENST00000496559 ATP1B4Q9UN42 357 aaPredicted RBP13.77□□□□□ -0.2
LRIG1-207ENST00000496559 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
LRIG1-207ENST00000496559 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
LRIG1-207ENST00000496559 NACADO15069 1562 aa13.71□□□□□ -0.21
LRIG1-207ENST00000496559 ERICH6Q7L0X2 663 aa13.71□□□□□ -0.21
LRIG1-207ENST00000496559 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
LRIG1-207ENST00000496559 APLP2Q06481 763 aa13.65□□□□□ -0.22
LRIG1-207ENST00000496559 HRCP23327 699 aa13.61□□□□□ -0.23
LRIG1-207ENST00000496559 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
LRIG1-207ENST00000496559 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
LRIG1-207ENST00000496559 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
LRIG1-207ENST00000496559 FBLN2P98095 1184 aa13.48□□□□□ -0.25
LRIG1-207ENST00000496559 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
LRIG1-207ENST00000496559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
LRIG1-207ENST00000496559 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
LRIG1-207ENST00000496559 P3H3Q8IVL6 736 aa13.37□□□□□ -0.27
LRIG1-207ENST00000496559 ITGAEP38570 1179 aa13.37□□□□□ -0.27
LRIG1-207ENST00000496559 CENPBP07199 599 aaPredicted RBP13.36□□□□□ -0.27
LRIG1-207ENST00000496559 ARID3CA6NKF2 412 aa13.34□□□□□ -0.27
LRIG1-207ENST00000496559 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
LRIG1-207ENST00000496559 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
LRIG1-207ENST00000496559 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
LRIG1-207ENST00000496559 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
LRIG1-207ENST00000496559 WIZO95785 1651 aa13.26□□□□□ -0.29
LRIG1-207ENST00000496559 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
LRIG1-207ENST00000496559 DNAJC5BQ9UF47 199 aa13.21□□□□□ -0.29
LRIG1-207ENST00000496559 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
LRIG1-207ENST00000496559 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
LRIG1-207ENST00000496559 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
LRIG1-207ENST00000496559 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
LRIG1-207ENST00000496559 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.31
LRIG1-207ENST00000496559 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
LRIG1-207ENST00000496559 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
LRIG1-207ENST00000496559 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
LRIG1-207ENST00000496559 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
LRIG1-207ENST00000496559 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
LRIG1-207ENST00000496559 ERCC6Q03468 1493 aa13.02□□□□□ -0.32
LRIG1-207ENST00000496559 SOGA1O94964 1423 aa13.02□□□□□ -0.33
LRIG1-207ENST00000496559 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
LRIG1-207ENST00000496559 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
LRIG1-207ENST00000496559 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
LRIG1-207ENST00000496559 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
LRIG1-207ENST00000496559 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
LRIG1-207ENST00000496559 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
LRIG1-207ENST00000496559 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
LRIG1-207ENST00000496559 ZNF777Q9ULD5 760 aaPredicted RBP12.9□□□□□ -0.35
LRIG1-207ENST00000496559 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
LRIG1-207ENST00000496559 NESP48681 1621 aa12.87□□□□□ -0.35
LRIG1-207ENST00000496559 CUX2O14529 1486 aa12.86□□□□□ -0.35
LRIG1-207ENST00000496559 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
LRIG1-207ENST00000496559 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
LRIG1-207ENST00000496559 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
LRIG1-207ENST00000496559 CC2D2AQ9P2K1 1620 aa12.83□□□□□ -0.36
LRIG1-207ENST00000496559 KIF27Q86VH2 1401 aa12.82□□□□□ -0.36
LRIG1-207ENST00000496559 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
LRIG1-207ENST00000496559 NCAPD3P42695 1498 aa12.8□□□□□ -0.36
LRIG1-207ENST00000496559 CLIP1P30622 1438 aa12.79□□□□□ -0.36
LRIG1-207ENST00000496559 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
LRIG1-207ENST00000496559 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
LRIG1-207ENST00000496559 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
LRIG1-207ENST00000496559 KCNH8Q96L42 1107 aa12.77□□□□□ -0.37
LRIG1-207ENST00000496559 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
LRIG1-207ENST00000496559 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
LRIG1-207ENST00000496559 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
LRIG1-207ENST00000496559 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
LRIG1-207ENST00000496559 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
LRIG1-207ENST00000496559 NEFLP07196 543 aa12.76□□□□□ -0.37
LRIG1-207ENST00000496559 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
LRIG1-207ENST00000496559 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
LRIG1-207ENST00000496559 GOLGA3Q08378 1498 aa12.71□□□□□ -0.37
LRIG1-207ENST00000496559 RAD54L2Q9Y4B4 1467 aa12.71□□□□□ -0.37
LRIG1-207ENST00000496559 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
LRIG1-207ENST00000496559 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
LRIG1-207ENST00000496559 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
LRIG1-207ENST00000496559 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
LRIG1-207ENST00000496559 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
LRIG1-207ENST00000496559 EEA1Q15075 1411 aa12.65□□□□□ -0.38
LRIG1-207ENST00000496559 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRIG1-207ENST00000496559 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms