RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 IQGAP2Q13576 1575 aa30.07■■■□□ 2.4
TSSC4-210ENST00000496468 KIAA0586Q9BVV6 1533 aa30.07■■■□□ 2.4
TSSC4-210ENST00000496468 EHMT2Q96KQ7 1210 aa30.02■■■□□ 2.4
TSSC4-210ENST00000496468 SHROOM2Q13796 1616 aa30■■■□□ 2.39
TSSC4-210ENST00000496468 UBTFP17480 764 aaKnown RBP29.92■■■□□ 2.38
TSSC4-210ENST00000496468 UGGT2Q9NYU1 1516 aa29.88■■■□□ 2.37
TSSC4-210ENST00000496468 ARHGEF11O15085 1522 aa29.83■■■□□ 2.37
TSSC4-210ENST00000496468 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
TSSC4-210ENST00000496468 PRG4Q92954 1404 aaPredicted RBP29.81■■■□□ 2.36
TSSC4-210ENST00000496468 TNIKQ9UKE5 1360 aa29.8■■■□□ 2.36
TSSC4-210ENST00000496468 RIMBP3CA6NJZ7 1639 aa29.79■■■□□ 2.36
TSSC4-210ENST00000496468 RIMBP3BA6NNM3 1639 aa29.79■■■□□ 2.36
TSSC4-210ENST00000496468 RIMBP3Q9UFD9 1639 aa29.79■■■□□ 2.36
TSSC4-210ENST00000496468 ERCC6L2Q5T890 1561 aa29.79■■■□□ 2.36
TSSC4-210ENST00000496468 KIAA0556O60303 1618 aa29.78■■■□□ 2.36
TSSC4-210ENST00000496468 SAMD9Q5K651 1589 aa29.76■■■□□ 2.35
TSSC4-210ENST00000496468 DISP1Q96F81 1524 aa29.76■■■□□ 2.35
TSSC4-210ENST00000496468 CARMIL2Q6F5E8 1435 aa29.75■■■□□ 2.35
TSSC4-210ENST00000496468 EFCAB5A4FU69 1503 aa29.75■■■□□ 2.35
TSSC4-210ENST00000496468 LOC105371045A0A1W2PR82 267 aa29.74■■■□□ 2.35
TSSC4-210ENST00000496468 DNAJC5Q9H3Z4 198 aa29.74■■■□□ 2.35
TSSC4-210ENST00000496468 RANGAP1P46060 587 aaPredicted RBP29.68■■■□□ 2.34
TSSC4-210ENST00000496468 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
TSSC4-210ENST00000496468 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
TSSC4-210ENST00000496468 CLIP1P30622 1438 aa29.61■■■□□ 2.33
TSSC4-210ENST00000496468 ARHGAP35Q9NRY4 1499 aa29.61■■■□□ 2.33
TSSC4-210ENST00000496468 FHOD3Q2V2M9 1422 aa29.56■■■□□ 2.32
TSSC4-210ENST00000496468 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
TSSC4-210ENST00000496468 PTPRGP23470 1445 aa29.51■■■□□ 2.31
TSSC4-210ENST00000496468 TTBK1Q5TCY1 1321 aaPredicted RBP29.46■■■□□ 2.31
TSSC4-210ENST00000496468 FMN1Q68DA7 1419 aa29.4■■■□□ 2.3
TSSC4-210ENST00000496468 CYB5RLQ6IPT4 315 aa29.39■■■□□ 2.3
TSSC4-210ENST00000496468 ABCA8O94911 1581 aa29.38■■■□□ 2.29
TSSC4-210ENST00000496468 RAPGEF6Q8TEU7 1601 aa29.37■■■□□ 2.29
TSSC4-210ENST00000496468 ADCY10Q96PN6 1610 aa29.37■■■□□ 2.29
TSSC4-210ENST00000496468 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
TSSC4-210ENST00000496468 ABCC2Q92887 1545 aa29.36■■■□□ 2.29
TSSC4-210ENST00000496468 UACAQ9BZF9 1416 aa29.36■■■□□ 2.29
TSSC4-210ENST00000496468 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
TSSC4-210ENST00000496468 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
TSSC4-210ENST00000496468 HECW1Q76N89 1606 aa29.28■■■□□ 2.28
TSSC4-210ENST00000496468 FYCO1Q9BQS8 1478 aa29.23■■■□□ 2.27
TSSC4-210ENST00000496468 VPS8Q8N3P4 1428 aa29.23■■■□□ 2.27
TSSC4-210ENST00000496468 NUP153P49790 1475 aaKnown RBP29.22■■■□□ 2.27
TSSC4-210ENST00000496468 CASKIN1Q8WXD9 1431 aa29.21■■■□□ 2.27
TSSC4-210ENST00000496468 ZCCHC11Q5TAX3 1644 aaKnown RBP29.19■■■□□ 2.26
TSSC4-210ENST00000496468 KDM5BQ9UGL1 1544 aa29.17■■■□□ 2.26
TSSC4-210ENST00000496468 LRRIQ1Q96JM4 1722 aa29.12■■■□□ 2.25
TSSC4-210ENST00000496468 CCDC18Q5T9S5 1454 aa29.1■■■□□ 2.25
TSSC4-210ENST00000496468 EPRSP07814 1512 aaKnown RBP29.1■■■□□ 2.25
TSSC4-210ENST00000496468 CDK13Q14004 1512 aaKnown RBP29.1■■■□□ 2.25
TSSC4-210ENST00000496468 ATP1B4Q9UN42 357 aaPredicted RBP29.09■■■□□ 2.25
TSSC4-210ENST00000496468 NPM1P06748 294 aaKnown RBP eCLIP29.08■■■□□ 2.25
TSSC4-210ENST00000496468 ARID3CA6NKF2 412 aa29.07■■■□□ 2.24
TSSC4-210ENST00000496468 MAPKBP1O60336 1514 aa29.07■■■□□ 2.24
TSSC4-210ENST00000496468 ATP10BO94823 1461 aa29.07■■■□□ 2.24
TSSC4-210ENST00000496468 CFAP43Q8NDM7 1665 aa29.03■■■□□ 2.24
TSSC4-210ENST00000496468 ASXL2Q76L83 1435 aa28.98■■■□□ 2.23
TSSC4-210ENST00000496468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.97■■■□□ 2.23
TSSC4-210ENST00000496468 HNRNPUL2Q1KMD3 747 aaKnown RBP28.97■■■□□ 2.23
TSSC4-210ENST00000496468 WDR7Q9Y4E6 1490 aa28.96■■■□□ 2.23
TSSC4-210ENST00000496468 TIAM1Q13009 1591 aa28.95■■■□□ 2.22
TSSC4-210ENST00000496468 MAP3K1Q13233 1512 aa28.89■■■□□ 2.22
TSSC4-210ENST00000496468 MAGI3Q5TCQ9 1506 aa28.86■■■□□ 2.21
TSSC4-210ENST00000496468 CDK11AQ9UQ88 783 aaPredicted RBP28.86■■■□□ 2.21
TSSC4-210ENST00000496468 DIP2BQ9P265 1576 aa28.86■■■□□ 2.21
TSSC4-210ENST00000496468 EHBP1L1Q8N3D4 1523 aa28.85■■■□□ 2.21
TSSC4-210ENST00000496468 TROQ12816 1431 aaPredicted RBP28.84■■■□□ 2.21
TSSC4-210ENST00000496468 KIF14Q15058 1648 aa28.83■■■□□ 2.21
TSSC4-210ENST00000496468 PLEKHD1A6NEE1 506 aa28.82■■■□□ 2.2
TSSC4-210ENST00000496468 ABCC10Q5T3U5 1492 aa28.81■■■□□ 2.2
TSSC4-210ENST00000496468 APLP2Q06481 763 aa28.81■■■□□ 2.2
TSSC4-210ENST00000496468 MTUS2Q5JR59 1369 aa28.79■■■□□ 2.2
TSSC4-210ENST00000496468 KIF13AQ9H1H9 1805 aa28.78■■■□□ 2.2
TSSC4-210ENST00000496468 LRRC9Q6ZRR7 1453 aa28.77■■■□□ 2.2
TSSC4-210ENST00000496468 GLI2P10070 1586 aa28.76■■■□□ 2.19
TSSC4-210ENST00000496468 ABCA9Q8IUA7 1624 aa28.72■■■□□ 2.19
TSSC4-210ENST00000496468 SUPT6HQ7KZ85 1726 aaKnown RBP28.72■■■□□ 2.19
TSSC4-210ENST00000496468 TTC37Q6PGP7 1564 aa28.71■■■□□ 2.19
TSSC4-210ENST00000496468 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
TSSC4-210ENST00000496468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.69■■■□□ 2.18
TSSC4-210ENST00000496468 MAP3K4Q9Y6R4 1608 aa28.69■■■□□ 2.18
TSSC4-210ENST00000496468 FAM69CQ0P6D2 419 aa28.66■■■□□ 2.18
TSSC4-210ENST00000496468 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
TSSC4-210ENST00000496468 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.18
TSSC4-210ENST00000496468 MYO5CQ9NQX4 1742 aa28.63■■■□□ 2.17
TSSC4-210ENST00000496468 NCOA2Q15596 1464 aa28.61■■■□□ 2.17
TSSC4-210ENST00000496468 PREX2Q70Z35 1606 aa28.58■■■□□ 2.17
TSSC4-210ENST00000496468 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
TSSC4-210ENST00000496468 CD109Q6YHK3 1445 aa28.57■■■□□ 2.16
TSSC4-210ENST00000496468 ITSN2Q9NZM3 1697 aa28.57■■■□□ 2.16
TSSC4-210ENST00000496468 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
TSSC4-210ENST00000496468 PPRC1Q5VV67 1664 aaKnown RBP28.55■■■□□ 2.16
TSSC4-210ENST00000496468 ARAP3Q8WWN8 1544 aa28.52■■■□□ 2.16
TSSC4-210ENST00000496468 CCNB3Q8WWL7 1395 aa28.51■■■□□ 2.16
TSSC4-210ENST00000496468 CFAP74Q9C0B2 1584 aa28.5■■■□□ 2.15
TSSC4-210ENST00000496468 TEX14Q8IWB6 1497 aa28.5■■■□□ 2.15
TSSC4-210ENST00000496468 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
TSSC4-210ENST00000496468 ARHGAP5Q13017 1502 aa28.48■■■□□ 2.15
TSSC4-210ENST00000496468 PLCH2O75038 1416 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms