RNA–Protein interactions for RNA: ENST00000496254.5

GNL3-211, Transcript of G protein nucleolar 3, humanhuman

TSL 5

Gene GNL3, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-211ENST00000496254 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
GNL3-211ENST00000496254 AMER1Q5JTC6 1135 aaPredicted RBP8.68□□□□□ -1.02
GNL3-211ENST00000496254 CUX1P39880 1505 aa8.67□□□□□ -1.02
GNL3-211ENST00000496254 CLIP1P30622 1438 aa8.66□□□□□ -1.02
GNL3-211ENST00000496254 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
GNL3-211ENST00000496254 RAPGEF2Q9Y4G8 1499 aa8.65□□□□□ -1.02
GNL3-211ENST00000496254 ZNF219Q9P2Y4 722 aaPredicted RBP8.64□□□□□ -1.03
GNL3-211ENST00000496254 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
GNL3-211ENST00000496254 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
GNL3-211ENST00000496254 PRXQ9BXM0 1461 aa8.63□□□□□ -1.03
GNL3-211ENST00000496254 CADPSQ9ULU8 1353 aa8.62□□□□□ -1.03
GNL3-211ENST00000496254 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
GNL3-211ENST00000496254 TRHP20396 242 aaPredicted RBP8.6□□□□□ -1.03
GNL3-211ENST00000496254 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
GNL3-211ENST00000496254 MYT1Q01538 1121 aa8.56□□□□□ -1.04
GNL3-211ENST00000496254 CCER1Q8TC90 406 aaPredicted RBP8.56□□□□□ -1.04
GNL3-211ENST00000496254 TIMELESSQ9UNS1 1208 aa8.54□□□□□ -1.04
GNL3-211ENST00000496254 CUX2O14529 1486 aa8.54□□□□□ -1.04
GNL3-211ENST00000496254 FGD5Q6ZNL6 1462 aa8.54□□□□□ -1.04
GNL3-211ENST00000496254 FANCD2Q9BXW9 1451 aa8.54□□□□□ -1.04
GNL3-211ENST00000496254 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
GNL3-211ENST00000496254 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.04
GNL3-211ENST00000496254 ABCB7O75027 752 aa8.52□□□□□ -1.05
GNL3-211ENST00000496254 LAMC3Q9Y6N6 1575 aa8.51□□□□□ -1.05
GNL3-211ENST00000496254 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
GNL3-211ENST00000496254 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
GNL3-211ENST00000496254 ARXQ96QS3 562 aa8.49□□□□□ -1.05
GNL3-211ENST00000496254 IGF1RP08069 1367 aa8.48□□□□□ -1.05
GNL3-211ENST00000496254 ARHGAP35Q9NRY4 1499 aa8.47□□□□□ -1.05
GNL3-211ENST00000496254 ABCA10Q8WWZ4 1543 aa8.47□□□□□ -1.05
GNL3-211ENST00000496254 TOPBP1Q92547 1522 aa8.47□□□□□ -1.05
GNL3-211ENST00000496254 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
GNL3-211ENST00000496254 CARMIL1Q5VZK9 1371 aa8.47□□□□□ -1.05
GNL3-211ENST00000496254 CUL7Q14999 1698 aa8.46□□□□□ -1.05
GNL3-211ENST00000496254 ZBTB22O15209 634 aa8.46□□□□□ -1.06
GNL3-211ENST00000496254 POLA1P09884 1462 aaPredicted RBP8.46□□□□□ -1.06
GNL3-211ENST00000496254 MAP3K1Q13233 1512 aa8.44□□□□□ -1.06
GNL3-211ENST00000496254 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
GNL3-211ENST00000496254 NESP48681 1621 aa8.44□□□□□ -1.06
GNL3-211ENST00000496254 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
GNL3-211ENST00000496254 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
GNL3-211ENST00000496254 CENPBP07199 599 aaPredicted RBP8.42□□□□□ -1.06
GNL3-211ENST00000496254 FHAD1B1AJZ9 1412 aa8.42□□□□□ -1.06
GNL3-211ENST00000496254 RRBP1Q9P2E9 1410 aaKnown RBP8.42□□□□□ -1.06
GNL3-211ENST00000496254 EFCAB5A4FU69 1503 aa8.42□□□□□ -1.06
GNL3-211ENST00000496254 CTTNBP2Q8WZ74 1663 aa8.41□□□□□ -1.06
GNL3-211ENST00000496254 ERCC6Q03468 1493 aa8.41□□□□□ -1.06
GNL3-211ENST00000496254 POLA2Q14181 598 aa8.41□□□□□ -1.06
GNL3-211ENST00000496254 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
GNL3-211ENST00000496254 TIAM1Q13009 1591 aa8.41□□□□□ -1.06
GNL3-211ENST00000496254 RAD54L2Q9Y4B4 1467 aa8.41□□□□□ -1.06
GNL3-211ENST00000496254 URB2Q14146 1524 aaKnown RBP8.4□□□□□ -1.07
GNL3-211ENST00000496254 ABCA5Q8WWZ7 1642 aa8.39□□□□□ -1.07
GNL3-211ENST00000496254 CFAP43Q8NDM7 1665 aa8.39□□□□□ -1.07
GNL3-211ENST00000496254 ATXN8OSP0DMR3 200 aa8.39□□□□□ -1.07
GNL3-211ENST00000496254 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
GNL3-211ENST00000496254 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
GNL3-211ENST00000496254 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
GNL3-211ENST00000496254 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
GNL3-211ENST00000496254 GTF3C3Q9Y5Q9 886 aa8.38□□□□□ -1.07
GNL3-211ENST00000496254 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
GNL3-211ENST00000496254 CCNB3Q8WWL7 1395 aa8.37□□□□□ -1.07
GNL3-211ENST00000496254 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
GNL3-211ENST00000496254 FYCO1Q9BQS8 1478 aa8.36□□□□□ -1.07
GNL3-211ENST00000496254 AQRO60306 1485 aaKnown RBP eCLIP8.36□□□□□ -1.079e-7■■■□□ 18.4
GNL3-211ENST00000496254 LRRC9Q6ZRR7 1453 aa8.35□□□□□ -1.07
GNL3-211ENST00000496254 GAPVD1Q14C86 1478 aa8.34□□□□□ -1.07
GNL3-211ENST00000496254 TAOK2Q9UL54 1235 aa8.34□□□□□ -1.07
GNL3-211ENST00000496254 FMN1Q68DA7 1419 aa8.33□□□□□ -1.08
GNL3-211ENST00000496254 TARBP1Q13395 1621 aaKnown RBP8.33□□□□□ -1.08
GNL3-211ENST00000496254 CASKIN1Q8WXD9 1431 aa8.33□□□□□ -1.08
GNL3-211ENST00000496254 THOC2Q8NI27 1593 aaKnown RBP8.33□□□□□ -1.08
GNL3-211ENST00000496254 RBM42Q9BTD8 480 aaKnown RBP8.32□□□□□ -1.08
GNL3-211ENST00000496254 SAMD9Q5K651 1589 aa8.32□□□□□ -1.08
GNL3-211ENST00000496254 FHOD3Q2V2M9 1422 aa8.32□□□□□ -1.08
GNL3-211ENST00000496254 DHX57Q6P158 1386 aaKnown RBP8.31□□□□□ -1.08
GNL3-211ENST00000496254 ZNF316A6NFI3 1004 aaPredicted RBP8.31□□□□□ -1.08
GNL3-211ENST00000496254 PBRM1Q86U86 1689 aa8.3□□□□□ -1.08
GNL3-211ENST00000496254 ZBTB12Q9Y330 459 aaPredicted RBP8.3□□□□□ -1.08
GNL3-211ENST00000496254 TDRD9Q8NDG6 1382 aaKnown RBP8.3□□□□□ -1.08
GNL3-211ENST00000496254 MRC2Q9UBG0 1479 aa8.29□□□□□ -1.08
GNL3-211ENST00000496254 SNAPC4Q5SXM2 1469 aa8.28□□□□□ -1.08
GNL3-211ENST00000496254 KLHL34Q8N239 644 aa8.27□□□□□ -1.08
GNL3-211ENST00000496254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.27□□□□□ -1.09
GNL3-211ENST00000496254 PHLDB1Q86UU1 1377 aa8.27□□□□□ -1.09
GNL3-211ENST00000496254 ADAMTS12P58397 1594 aa8.27□□□□□ -1.09
GNL3-211ENST00000496254 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
GNL3-211ENST00000496254 IQGAP2Q13576 1575 aa8.25□□□□□ -1.09
GNL3-211ENST00000496254 WDR62O43379 1518 aa8.25□□□□□ -1.09
GNL3-211ENST00000496254 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
GNL3-211ENST00000496254 GRIN2BQ13224 1484 aa8.24□□□□□ -1.09
GNL3-211ENST00000496254 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
GNL3-211ENST00000496254 SETD5Q9C0A6 1442 aa8.24□□□□□ -1.09
GNL3-211ENST00000496254 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
GNL3-211ENST00000496254 EHBP1L1Q8N3D4 1523 aa8.24□□□□□ -1.09
GNL3-211ENST00000496254 CCDC18Q5T9S5 1454 aa8.24□□□□□ -1.09
GNL3-211ENST00000496254 MTUS2Q5JR59 1369 aa8.23□□□□□ -1.09
GNL3-211ENST00000496254 SUPT6HQ7KZ85 1726 aaKnown RBP8.23□□□□□ -1.09
GNL3-211ENST00000496254 LRRIQ1Q96JM4 1722 aa8.23□□□□□ -1.09
GNL3-211ENST00000496254 HOMEZQ8IX15 550 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms